Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:54:45 (3830331): wrapper (7.7.26015): starting
11:54:45 (3830331): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:54:45] Arguments: --nthreads 8
[2025-06-03 11:54:45] Threads: 8
[2025-06-03 11:54:45] Checking for CVMFS
[2025-06-03 11:54:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:54:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:54:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:54:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:54:45] 2.12.6.0 1303481 22053 301280 146748 2 197 27252595 32935937 5053 16776704 0 68396188 99.642 72001687 34284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:54:45] CVMFS is ok
[2025-06-03 11:54:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:54:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:54:45] Further information can be found at the LHC@home message board.
[2025-06-03 11:54:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:54:45] Checking for apptainer binary...
[2025-06-03 11:54:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:54:45] Running /usr/bin/apptainer --version
[2025-06-03 11:54:45] apptainer version 1.4.1-1.el9
[2025-06-03 11:54:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:54:45] c6-6-39-4.aglt2.org
[2025-06-03 11:54:45] apptainer works
[2025-06-03 11:54:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:54:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:54:45] Starting ATLAS job with PandaID=6677621696
[2025-06-03 11:54:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:59:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:59:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 12:59:54]  is_altstaged=None
[2025-06-03 12:59:54]  is_tar=False
[2025-06-03 12:59:54]  lfn=log.45006595._033802.job.log.tgz.1
[2025-06-03 12:59:54]  mtime=0
[2025-06-03 12:59:54]  protocol_id=None
[2025-06-03 12:59:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 12:59:54]  replicas=None
[2025-06-03 12:59:54]  scope=mc23_13p6TeV
[2025-06-03 12:59:54]  status=None
[2025-06-03 12:59:54]  status_code=0
[2025-06-03 12:59:54]  storage_token=
[2025-06-03 12:59:54]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677621696/log.45006595._033802.job.log.tgz.1
[2025-06-03 12:59:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/6e/log.45006595._033802.job.log.tgz.1
[2025-06-03 12:59:54]  workdir=None
[2025-06-03 12:59:54] ]
[2025-06-03 12:59:54] 2025-06-03 16:59:36,844 | INFO     | transferring file log.45006595._033802.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677621696/log.45006595._033802.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 12:59:54] 2025-06-03 16:59:36,844 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677621696/log.45006595._033802.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._033802.job
[2025-06-03 12:59:54] 2025-06-03 16:59:36,862 | INFO     | adding to output.list: log.45006595._033802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/6e/log.45006595._033802.job.log.tg
[2025-06-03 12:59:54] 2025-06-03 16:59:36,863 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 12:59:54] 2025-06-03 16:59:36,863 | INFO     | summary of transferred files:
[2025-06-03 12:59:54] 2025-06-03 16:59:36,863 | INFO     |  -- lfn=log.45006595._033802.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 12:59:54] 2025-06-03 16:59:36,863 | INFO     | stage-out finished correctly
[2025-06-03 12:59:54] 2025-06-03 16:59:38,649 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 12:59:54] 2025-06-03 16:59:38,730 | INFO     | job 6677621696 has state=finished
[2025-06-03 12:59:54] 2025-06-03 16:59:38,730 | INFO     | preparing for final server update for job 6677621696 in state='finished'
[2025-06-03 12:59:54] 2025-06-03 16:59:38,786 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 12:59:54] 2025-06-03 16:59:38,787 | INFO     | this job has now completed (state=finished)
[2025-06-03 12:59:54] 2025-06-03 16:59:38,787 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:59:54] 2025-06-03 16:59:38,787 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:59:54] 2025-06-03 16:59:38,787 | INFO     | job 6677621696 has finished - writing final server update
[2025-06-03 12:59:54] 2025-06-03 16:59:38,787 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:59:54] 2025-06-03 16:59:38,801 | INFO     | executing command: lscpu
[2025-06-03 12:59:54] 2025-06-03 16:59:38,870 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:59:54] 2025-06-03 16:59:41,882 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 12:59:54] 2025-06-03 16:59:41,883 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677621696/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:59:54] 2025-06-03 16:59:41,884 | INFO     | extracted standard info from prmon json
[2025-06-03 12:59:54] 2025-06-03 16:59:41,884 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:59:54] 2025-06-03 16:59:41,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:59:54] 2025-06-03 16:59:41,885 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:59:54] 2025-06-03 16:59:41,885 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:59:54] 2025-06-03 16:59:41,886 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | sum of square deviations: 57407588.0
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | sum of deviations: 8056218394.000001
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | mean x: 1748968133.0
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | mean y: 2090457.3684210526
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | -- intersect: -245437053294.75092
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | intersect: -245437053294.75092
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | chi2: 1.1190223159463284
[2025-06-03 12:59:54] 2025-06-03 16:59:41,887 | INFO     | -- intersect: -245437053294.75092
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | current memory leak: 140.33 B/s (using 57 data points, chi2=1.12)
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | ..............................
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . Timing measurements:
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . get job = 0 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . initial setup = 2 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . payload setup = 5 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . stage-in = 0 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . payload execution = 3856 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,888 | INFO     | . stage-out = 0 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,889 | INFO     | . log creation = 0 s
[2025-06-03 12:59:54] 2025-06-03 16:59:41,889 | INFO     | ..............................
[2025-06-03 12:59:54] 2025-06-03 16:59:42,127 | WARNING  | process 3842115 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 12:59:54] 2025-06-03 16:59:42,128 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677621696/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:59:54] 2025-06-03 16:59:42,223 | INFO     | 
[2025-06-03 12:59:54] 2025-06-03 16:59:42,223 | INFO     | job summary report
[2025-06-03 12:59:54] 2025-06-03 16:59:42,223 | INFO     | --------------------------------------------------
[2025-06-03 12:59:54] 2025-06-03 16:59:42,223 | INFO     | PanDA job id: 6677621696
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | task id: 45006595
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | errors: (none)
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | pilot state: finished 
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | transexitcode: 0
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | exeerrorcode: 0
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | exeerrordiag: 
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | exitcode: 0
[2025-06-03 12:59:54] 2025-06-03 16:59:42,224 | INFO     | exitmsg: OK
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | cpuconsumptiontime: 25602 s
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | nevents: 400
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | neventsw: 0
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | pid: 3842115
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | pgrp: 3842115
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | corecount: 8
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | event service: False
[2025-06-03 12:59:54] 2025-06-03 16:59:42,225 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 3866: 2431268, 3867: 2440209, 3869: 2440393, 3872: 2440563}
[2025-06-03 12:59:54] 2025-06-03 16:59:42,226 | INFO     | --------------------------------------------------
[2025-06-03 12:59:54] 2025-06-03 16:59:42,226 | INFO     | 
[2025-06-03 12:59:54] 2025-06-03 16:59:42,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 12:59:54] 2025-06-03 16:59:42,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:59:54] 2025-06-03 16:59:42,245 | INFO     | job 6677621696 has completed (purged errors)
[2025-06-03 12:59:54] 2025-06-03 16:59:42,245 | INFO     | overall cleanup function is called
[2025-06-03 12:59:54] 2025-06-03 16:59:42,304 | INFO     | number of running child processes to parent process 3842115: 1
[2025-06-03 12:59:54] 2025-06-03 16:59:42,304 | INFO     | maximum number of monitored processes: 6
[2025-06-03 12:59:54] 2025-06-03 16:59:42,304 | INFO     | aborting job monitoring since job object (job id=6677621696) has expired
[2025-06-03 12:59:54] 2025-06-03 16:59:42,795 | INFO     | PID=3834665 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 12:59:54] 2025-06-03 16:59:42,795 | INFO     | .. there are 8 such processes running
[2025-06-03 12:59:54] 2025-06-03 16:59:43,253 | INFO     | --- collectZombieJob: --- 10, [3842115]
[2025-06-03 12:59:54] 2025-06-03 16:59:43,253 | INFO     | zombie collector waiting for pid 3842115
[2025-06-03 12:59:54] 2025-06-03 16:59:43,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:59:54] 2025-06-03 16:59:43,253 | INFO     | collected zombie processes
[2025-06-03 12:59:54] 2025-06-03 16:59:43,253 | INFO     | will attempt to kill all subprocesses of pid=3842115
[2025-06-03 12:59:54] 2025-06-03 16:59:43,482 | INFO     | process IDs to be killed: [3842115] (in reverse order)
[2025-06-03 12:59:54] 2025-06-03 16:59:43,556 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:59:54] 2025-06-03 16:59:43,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:59:54] 2025-06-03 16:59:43,564 | INFO     | did not find any defunct processes belonging to 3842115
[2025-06-03 12:59:54] 2025-06-03 16:59:43,572 | INFO     | did not find any defunct processes belonging to 3842115
[2025-06-03 12:59:54] 2025-06-03 16:59:43,572 | INFO     | ready for new job
[2025-06-03 12:59:54] 2025-06-03 16:59:43,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:59:54] 2025-06-03 16:59:43,574 | INFO     | **************************************
[2025-06-03 12:59:54] 2025-06-03 16:59:43,574 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:59:54] 2025-06-03 16:59:43,574 | INFO     | **************************************
[2025-06-03 12:59:54] 2025-06-03 16:59:43,574 | INFO     | 
[2025-06-03 12:59:54] 2025-06-03 16:59:43,588 | INFO     | architecture information:
[2025-06-03 12:59:54] 2025-06-03 16:59:43,589 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:59:54] 2025-06-03 16:59:43,603 | INFO     | cat /etc/os-release:
[2025-06-03 12:59:54] NAME="CentOS Linux"
[2025-06-03 12:59:54] VERSION="7 (Core)"
[2025-06-03 12:59:54] ID="centos"
[2025-06-03 12:59:54] ID_LIKE="rhel fedora"
[2025-06-03 12:59:54] VERSION_ID="7"
[2025-06-03 12:59:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:59:54] ANSI_COLOR="0;31"
[2025-06-03 12:59:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:59:54] HOME_URL="https://www.centos.org/"
[2025-06-03 12:59:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:59:54] 
[2025-06-03 12:59:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:59:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:59:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:59:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:59:54] 
[2025-06-03 12:59:54] 2025-06-03 16:59:43,603 | INFO     | **************************************
[2025-06-03 12:59:54] 2025-06-03 16:59:44,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 12:59:54] 2025-06-03 16:59:44,121 | INFO     | sufficient remaining disk space (73678192640 B)
[2025-06-03 12:59:54] 2025-06-03 16:59:44,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:59:54] 2025-06-03 16:59:44,121 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:59:54] 2025-06-03 16:59:44,121 | INFO     | update_server=False
[2025-06-03 12:59:54] 2025-06-03 16:59:44,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:59:54] 2025-06-03 16:59:44,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:59:54] 2025-06-03 16:59:44,122 | INFO     | aborting loop
[2025-06-03 12:59:54] 2025-06-03 16:59:44,271 | INFO     | all data control threads have been joined
[2025-06-03 12:59:54] 2025-06-03 16:59:44,476 | INFO     | all job control threads have been joined
[2025-06-03 12:59:54] 2025-06-03 16:59:44,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:59:54] 2025-06-03 16:59:44,801 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:59:54] 2025-06-03 16:59:44,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:59:54] 2025-06-03 16:59:44,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:59:54] 2025-06-03 16:59:44,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:59:54] 2025-06-03 16:59:45,123 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,125 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,168 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,173 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,277 | INFO     | [data] control thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,360 | INFO     | all payload control threads have been joined
[2025-06-03 12:59:54] 2025-06-03 16:59:45,482 | INFO     | [job] control thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:45,688 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,020 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,166 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,365 | INFO     | [payload] control thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,429 | INFO     | [job] validate thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,967 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:46,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:59:54] 2025-06-03 16:59:47,986 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:48,742 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:59:54] 2025-06-03 16:59:49,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172508456768)>', '<ExcThread(monitor, started 140172020672256)>']
[2025-06-03 12:59:54] 2025-06-03 16:59:49,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:59:54] 2025-06-03 16:59:49,824 | INFO     | [monitor] control thread has ended
[2025-06-03 12:59:54] 2025-06-03 16:59:54,588 | INFO     | all workflow threads have been joined
[2025-06-03 12:59:54] 2025-06-03 16:59:54,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:59:54] 2025-06-03 16:59:54,589 | INFO     | traces error code: 0
[2025-06-03 12:59:54] 2025-06-03 16:59:54,589 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:59:54] 2025-06-03 16:59:54,743 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:59:54] 2025-06-03 16:59:54,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:59:54] 2025-06-03 16:59:54,747 [wrapper] pilotpid: 3834665
[2025-06-03 12:59:54] 2025-06-03 16:59:54,750 [wrapper] Pilot exit status: 0
[2025-06-03 12:59:54] 2025-06-03 16:59:54,758 [wrapper] pandaids: 6677621696
[2025-06-03 12:59:54] 2025-06-03 16:59:54,806 [wrapper] cleanup supervisor_pilot 4060174 3834666
[2025-06-03 12:59:54] 2025-06-03 16:59:54,810 [wrapper] Test setup, not cleaning
[2025-06-03 12:59:54] 2025-06-03 16:59:54,812 [wrapper] apfmon messages muted
[2025-06-03 12:59:54] 2025-06-03 16:59:54,815 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:59:54] 2025-06-03 16:59:54,817 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:59:54]  *** Error codes and diagnostics ***
[2025-06-03 12:59:54]     "exeErrorCode": 0,
[2025-06-03 12:59:54]     "exeErrorDiag": "",
[2025-06-03 12:59:54]     "pilotErrorCode": 0,
[2025-06-03 12:59:54]     "pilotErrorDiag": "",
[2025-06-03 12:59:54]  *** Listing of results directory ***
[2025-06-03 12:59:54] total 388020
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 12:59:54] -rwx------. 1 boincer umatlas     37140 Jun  3 09:23 runpilot2-wrapper.sh
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:23 queuedata.json
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:59:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:54 run_atlas
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:54 job.xml
[2025-06-03 12:59:54] -rw-r--r--. 2 boincer umatlas 215304294 Jun  3 11:54 EVNT.45006593._001360.pool.root.1
[2025-06-03 12:59:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:54 start_atlas.sh
[2025-06-03 12:59:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:54 shared
[2025-06-03 12:59:54] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 11:54 input.tar.gz
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:54 boinc_lockfile
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:54 pandaJob.out
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas    983735 Jun  3 11:54 agis_schedconf.cvmfs.json
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:59:54] drwx------. 4 boincer umatlas      4096 Jun  3 11:54 pilot3
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 12:56 init_data.xml
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas        95 Jun  3 12:58 pilot_heartbeat.json
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas 176816599 Jun  3 12:59 HITS.45006595._033802.pool.root.1
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas       529 Jun  3 12:59 boinc_task_state.xml
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas      1030 Jun  3 12:59 memory_monitor_summary.json
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas    293617 Jun  3 12:59 log.45006595._033802.job.log.tgz.1
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas      7713 Jun  3 12:59 heartbeat.json
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:59 wrapper_checkpoint.txt
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas      4353 Jun  3 12:59 pilotlog.txt
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:59 boinc_mmap_file
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas    395263 Jun  3 12:59 log.45006595._033802.job.log.1
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas       357 Jun  3 12:59 output.list
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:59 runtime_log
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas    706560 Jun  3 12:59 result.tar.gz
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 12:59 runtime_log.err
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas       651 Jun  3 12:59 5vRMDmVngg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrhYKDmR4fyen.diag
[2025-06-03 12:59:54] -rw-r--r--. 1 boincer umatlas     21464 Jun  3 12:59 stderr.txt
[2025-06-03 12:59:54] HITS file was successfully produced:
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas 176816599 Jun  3 12:59 shared/HITS.pool.root.1
[2025-06-03 12:59:54]  *** Contents of shared directory: ***
[2025-06-03 12:59:54] total 384148
[2025-06-03 12:59:54] -rw-r--r--. 2 boincer umatlas 215304294 Jun  3 11:54 ATLAS.root_0
[2025-06-03 12:59:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:54 start_atlas.sh
[2025-06-03 12:59:54] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 11:54 input.tar.gz
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas 176816599 Jun  3 12:59 HITS.pool.root.1
[2025-06-03 12:59:54] -rw-------. 1 boincer umatlas    706560 Jun  3 12:59 result.tar.gz
12:59:55 (3830331): run_atlas exited; CPU time 25685.345645
12:59:55 (3830331): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN