Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:36:59 (21535): wrapper (7.7.26015): starting
03:36:59 (21535): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:37:00] Arguments: --nthreads 8
[2025-06-04 03:37:00] Threads: 8
[2025-06-04 03:37:00] Checking for CVMFS
[2025-06-04 03:37:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:37:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:37:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:37:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:37:02] 2.11.2.0 5632 32551 96276 146762 1 298 20300746 25165825 4131 130560 0 16592966 99.780 19776288 2125 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 03:37:02] CVMFS is ok
[2025-06-04 03:37:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:37:02] Checking for apptainer binary...
[2025-06-04 03:37:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:37:02] Running /usr/bin/apptainer --version
[2025-06-04 03:37:02] apptainer version 1.3.2-1.el7
[2025-06-04 03:37:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:07:37] cg-vwn252.simple-grid.lan
[2025-06-04 04:07:37] apptainer works
[2025-06-04 04:07:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:07:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:07:37] Starting ATLAS job with PandaID=6677455176
[2025-06-04 04:07:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:43:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:43:30] 2025-06-04 06:15:01,929 | INFO     | extracted standard info from prmon json
[2025-06-04 08:43:30] 2025-06-04 06:15:01,930 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:43:30] 2025-06-04 06:15:01,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:43:30] 2025-06-04 06:15:01,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:43:30] 2025-06-04 06:15:01,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:43:30] 2025-06-04 06:15:01,935 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:43:30] 2025-06-04 06:15:01,936 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,945 | INFO     | sum of deviations: 61041388530.500015
[2025-06-04 08:43:30] 2025-06-04 06:15:01,945 | INFO     | mean x: 1749010537.5
[2025-06-04 08:43:30] 2025-06-04 06:15:01,945 | INFO     | mean y: 2448049.004310345
[2025-06-04 08:43:30] 2025-06-04 06:15:01,945 | INFO     | -- intersect: -27570456688.52664
[2025-06-04 08:43:30] 2025-06-04 06:15:01,945 | INFO     | intersect: -27570456688.52664
[2025-06-04 08:43:30] 2025-06-04 06:15:01,946 | INFO     | chi2: 6.387594516276691
[2025-06-04 08:43:30] 2025-06-04 06:15:01,946 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,948 | INFO     | sum of deviations: 74868229647.00003
[2025-06-04 08:43:30] 2025-06-04 06:15:01,949 | INFO     | mean x: 1749010385.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,949 | INFO     | mean y: 2456488.7753303964
[2025-06-04 08:43:30] 2025-06-04 06:15:01,949 | INFO     | -- intersect: -36100468137.935814
[2025-06-04 08:43:30] 2025-06-04 06:15:01,949 | INFO     | intersect: -36100468137.935814
[2025-06-04 08:43:30] 2025-06-04 06:15:01,949 | INFO     | chi2: 5.67609504692271
[2025-06-04 08:43:30] 2025-06-04 06:15:01,949 | INFO     | current chi2=5.67609504692271 (change=11.13877011981517 %)
[2025-06-04 08:43:30] 2025-06-04 06:15:01,950 | INFO     | right removable region: 226
[2025-06-04 08:43:30] 2025-06-04 06:15:01,950 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,958 | INFO     | sum of deviations: -17773279456.999996
[2025-06-04 08:43:30] 2025-06-04 06:15:01,959 | INFO     | mean x: 1749010690.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,959 | INFO     | mean y: 2497056.599118943
[2025-06-04 08:43:30] 2025-06-04 06:15:01,959 | INFO     | -- intersect: 8573121519.441466
[2025-06-04 08:43:30] 2025-06-04 06:15:01,959 | INFO     | intersect: 8573121519.441466
[2025-06-04 08:43:30] 2025-06-04 06:15:01,959 | INFO     | chi2: 1.792211026627323
[2025-06-04 08:43:30] 2025-06-04 06:15:01,960 | INFO     | current chi2=1.792211026627323 (change=71.94231690724168 %)
[2025-06-04 08:43:30] 2025-06-04 06:15:01,960 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 08:43:30] 2025-06-04 06:15:01,962 | INFO     | sum of deviations: -45696837737.5
[2025-06-04 08:43:30] 2025-06-04 06:15:01,962 | INFO     | mean x: 1749010842.5
[2025-06-04 08:43:30] 2025-06-04 06:15:01,962 | INFO     | mean y: 2515074.0495495494
[2025-06-04 08:43:30] 2025-06-04 06:15:01,963 | INFO     | -- intersect: 23561149562.316673
[2025-06-04 08:43:30] 2025-06-04 06:15:01,963 | INFO     | intersect: 23561149562.316673
[2025-06-04 08:43:30] 2025-06-04 06:15:01,963 | INFO     | chi2: 0.972411478039729
[2025-06-04 08:43:30] 2025-06-04 06:15:01,963 | INFO     | current chi2=0.972411478039729 (change=45.742356028817426 %)
[2025-06-04 08:43:30] 2025-06-04 06:15:01,964 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,965 | INFO     | sum of deviations: -43254980867.00001
[2025-06-04 08:43:30] 2025-06-04 06:15:01,966 | INFO     | mean x: 1749010995.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,966 | INFO     | mean y: 2513376.1658986174
[2025-06-04 08:43:30] 2025-06-04 06:15:01,966 | INFO     | -- intersect: 23879540969.64243
[2025-06-04 08:43:30] 2025-06-04 06:15:01,966 | INFO     | intersect: 23879540969.64243
[2025-06-04 08:43:30] 2025-06-04 06:15:01,966 | INFO     | chi2: 0.958572989807003
[2025-06-04 08:43:30] 2025-06-04 06:15:01,967 | INFO     | current chi2=0.958572989807003 (change=1.4231103339733158 %)
[2025-06-04 08:43:30] 2025-06-04 06:15:01,967 | INFO     | left removable region: 30
[2025-06-04 08:43:30] 2025-06-04 06:15:01,967 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 08:43:30] 2025-06-04 06:15:01,969 | INFO     | sum of deviations: -5899931437.499999
[2025-06-04 08:43:30] 2025-06-04 06:15:01,969 | INFO     | mean x: 1749011269.5
[2025-06-04 08:43:30] 2025-06-04 06:15:01,969 | INFO     | mean y: 2506437.474489796
[2025-06-04 08:43:30] 2025-06-04 06:15:01,969 | INFO     | -- intersect: 4422322946.129433
[2025-06-04 08:43:30] 2025-06-04 06:15:01,969 | INFO     | intersect: 4422322946.129433
[2025-06-04 08:43:30] 2025-06-04 06:15:01,970 | INFO     | chi2: 0.08207963922630691
[2025-06-04 08:43:30] 2025-06-04 06:15:01,970 | INFO     | -- intersect: 4422322946.129433
[2025-06-04 08:43:30] 2025-06-04 06:15:01,970 | INFO     | current memory leak: -2.53 B/s (using 196 data points, chi2=0.08)
[2025-06-04 08:43:30] 2025-06-04 06:15:01,971 | INFO     | ..............................
[2025-06-04 08:43:30] 2025-06-04 06:15:01,971 | INFO     | . Timing measurements:
[2025-06-04 08:43:30] 2025-06-04 06:15:01,971 | INFO     | . get job = 0 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,971 | INFO     | . initial setup = 10 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,971 | INFO     | . payload setup = 128 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,971 | INFO     | . stage-in = 0 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,972 | INFO     | . payload execution = 14249 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,972 | INFO     | . stage-out = 3 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,972 | INFO     | . log creation = 1 s
[2025-06-04 08:43:30] 2025-06-04 06:15:01,972 | INFO     | ..............................
[2025-06-04 08:43:30] 2025-06-04 06:15:02,150 | INFO     | 
[2025-06-04 08:43:30] 2025-06-04 06:15:02,150 | INFO     | job summary report
[2025-06-04 08:43:30] 2025-06-04 06:15:02,150 | INFO     | --------------------------------------------------
[2025-06-04 08:43:30] 2025-06-04 06:15:02,150 | INFO     | PanDA job id: 6677455176
[2025-06-04 08:43:30] 2025-06-04 06:15:02,150 | INFO     | task id: 45006595
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | errors: (none)
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | pilot state: finished 
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | transexitcode: 0
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | exeerrorcode: 0
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | exeerrordiag: 
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | exitcode: 0
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | exitmsg: OK
[2025-06-04 08:43:30] 2025-06-04 06:15:02,151 | INFO     | cpuconsumptiontime: 51393 s
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | nevents: 400
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | neventsw: 0
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | pid: 20457
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | pgrp: 20457
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | corecount: 8
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | event service: False
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | sizes: {0: 2404956, 1: 2405211, 12: 2405211, 23: 2405239, 34: 2405267, 44: 2405295, 55: 2405451, 66: 2405479, 76: 2405507, 87: 2405563, 88: 2405797, 98: 2406105, 1
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | --------------------------------------------------
[2025-06-04 08:43:30] 2025-06-04 06:15:02,152 | INFO     | 
[2025-06-04 08:43:30] 2025-06-04 06:15:02,153 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-04 08:43:30] 2025-06-04 06:15:02,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:43:30] 2025-06-04 06:15:02,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:43:30] 2025-06-04 06:15:02,425 | INFO     | job 6677455176 has completed (purged errors)
[2025-06-04 08:43:30] 2025-06-04 06:15:02,425 | INFO     | overall cleanup function is called
[2025-06-04 08:43:30] 2025-06-04 06:15:03,434 | INFO     | --- collectZombieJob: --- 10, [20457]
[2025-06-04 08:43:30] 2025-06-04 06:15:03,435 | INFO     | zombie collector waiting for pid 20457
[2025-06-04 08:43:30] 2025-06-04 06:15:03,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:43:30] 2025-06-04 06:15:03,435 | INFO     | collected zombie processes
[2025-06-04 08:43:30] 2025-06-04 06:15:03,435 | INFO     | will attempt to kill all subprocesses of pid=20457
[2025-06-04 08:43:30] 2025-06-04 06:15:03,558 | INFO     | process IDs to be killed: [20457] (in reverse order)
[2025-06-04 08:43:30] 2025-06-04 06:15:04,362 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:43:30] 2025-06-04 06:15:04,362 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:43:30] 2025-06-04 06:15:04,366 | INFO     | did not find any defunct processes belonging to 20457
[2025-06-04 08:43:30] 2025-06-04 06:15:04,369 | INFO     | did not find any defunct processes belonging to 20457
[2025-06-04 08:43:30] 2025-06-04 06:15:04,370 | INFO     | ready for new job
[2025-06-04 08:43:30] 2025-06-04 06:15:04,370 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:43:30] 2025-06-04 06:15:04,372 | INFO     | **************************************
[2025-06-04 08:43:30] 2025-06-04 06:15:04,372 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:43:30] 2025-06-04 06:15:04,372 | INFO     | **************************************
[2025-06-04 08:43:30] 2025-06-04 06:15:04,372 | INFO     | 
[2025-06-04 08:43:30] 2025-06-04 06:15:04,373 | INFO     | pilot is running in a VM
[2025-06-04 08:43:30] 2025-06-04 06:15:04,373 | INFO     | architecture information:
[2025-06-04 08:43:30] 2025-06-04 06:15:04,388 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:43:30] 2025-06-04 06:15:04,712 | INFO     | cat /etc/os-release:
[2025-06-04 08:43:30] NAME="CentOS Linux"
[2025-06-04 08:43:30] VERSION="7 (Core)"
[2025-06-04 08:43:30] ID="centos"
[2025-06-04 08:43:30] ID_LIKE="rhel fedora"
[2025-06-04 08:43:30] VERSION_ID="7"
[2025-06-04 08:43:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:43:30] ANSI_COLOR="0;31"
[2025-06-04 08:43:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:43:30] HOME_URL="https://www.centos.org/"
[2025-06-04 08:43:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:43:30] 
[2025-06-04 08:43:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:43:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:43:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:43:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:43:30] 
[2025-06-04 08:43:30] 2025-06-04 06:15:04,716 | INFO     | **************************************
[2025-06-04 08:43:30] 2025-06-04 06:15:05,220 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-04 08:43:30] 2025-06-04 06:15:05,454 | INFO     | sufficient remaining disk space (496872980480 B)
[2025-06-04 08:43:30] 2025-06-04 06:15:05,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:43:30] 2025-06-04 06:15:05,455 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:43:30] 2025-06-04 06:15:05,455 | INFO     | update_server=False
[2025-06-04 08:43:30] 2025-06-04 06:15:05,455 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:43:30] 2025-06-04 06:15:05,455 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 08:43:30] 2025-06-04 06:15:05,456 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:43:30] 2025-06-04 06:15:05,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:43:30] 2025-06-04 06:15:05,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:43:30] 2025-06-04 06:15:05,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:43:30] 2025-06-04 06:15:05,460 | INFO     | aborting loop
[2025-06-04 08:43:30] 2025-06-04 06:15:05,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:43:30] 2025-06-04 06:15:05,851 | INFO     | all data control threads have been joined
[2025-06-04 08:43:30] 2025-06-04 06:15:05,927 | INFO     | all payload control threads have been joined
[2025-06-04 08:43:30] 2025-06-04 06:15:06,462 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:06,465 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:06,468 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:06,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:43:30] 2025-06-04 06:15:06,651 | INFO     | all job control threads have been joined
[2025-06-04 08:43:30] 2025-06-04 06:15:06,776 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:06,857 | INFO     | [data] control thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:06,934 | INFO     | [payload] control thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,041 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:43:30] 2025-06-04 06:15:07,172 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,324 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,534 | INFO     | [job] validate thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,657 | INFO     | [job] control thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:07,809 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:08,170 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:08,491 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:09,534 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:43:30] 2025-06-04 06:15:10,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910783395648)>', '<ExcThread(monitor, started 139910338033408)>']
[2025-06-04 08:43:30] 2025-06-04 06:15:11,492 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:43:30] 2025-06-04 06:15:11,493 | INFO     | [monitor] control thread has ended
[2025-06-04 08:43:30] 2025-06-04 06:15:15,826 | INFO     | all workflow threads have been joined
[2025-06-04 08:43:30] 2025-06-04 06:15:15,827 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:43:30] 2025-06-04 06:15:15,827 | INFO     | traces error code: 0
[2025-06-04 08:43:30] 2025-06-04 06:15:15,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:43:30] 2025-06-04 06:15:16,253 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:43:30] 2025-06-04 06:15:16,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:43:30] 2025-06-04 06:15:16,478 [wrapper] pilotpid: 11818
[2025-06-04 08:43:30] 2025-06-04 06:15:16,588 [wrapper] Pilot exit status: 0
[2025-06-04 08:43:30] 2025-06-04 06:15:17,025 [wrapper] pandaids: 6677455176
[2025-06-04 08:43:30] 2025-06-04 06:15:18,050 [wrapper] cleanup supervisor_pilot 27808 11819
[2025-06-04 08:43:30] 2025-06-04 06:15:18,068 [wrapper] Test setup, not cleaning
[2025-06-04 08:43:30] 2025-06-04 06:15:18,162 [wrapper] apfmon messages muted
[2025-06-04 08:43:30] 2025-06-04 06:15:18,305 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:43:30] 2025-06-04 06:15:18,371 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:43:30]  *** Error codes and diagnostics ***
[2025-06-04 08:43:30]     "exeErrorCode": 0,
[2025-06-04 08:43:30]     "exeErrorDiag": "",
[2025-06-04 08:43:30]     "pilotErrorCode": 0,
[2025-06-04 08:43:30]     "pilotErrorDiag": "",
[2025-06-04 08:43:30]  *** Listing of results directory ***
[2025-06-04 08:43:30] total 397172
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc    495897 Jun  3 05:33 pilot3.tar.gz
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc      5111 Jun  3 05:37 queuedata.json
[2025-06-04 08:43:30] -rwx------. 1 boinc boinc     37140 Jun  3 05:38 runpilot2-wrapper.sh
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:43:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:36 run_atlas
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:36 job.xml
[2025-06-04 08:43:30] -rw-r--r--. 2 boinc boinc 214125709 Jun  4 03:36 EVNT.45006593._000740.pool.root.1
[2025-06-04 08:43:30] drwxrwx--x. 2 boinc boinc        68 Jun  4 03:36 shared
[2025-06-04 08:43:30] -rw-r--r--. 2 boinc boinc    508881 Jun  4 03:36 input.tar.gz
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc      6391 Jun  4 03:36 init_data.xml
[2025-06-04 08:43:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:36 start_atlas.sh
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:36 boinc_lockfile
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc      2524 Jun  4 04:07 pandaJob.out
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc    986077 Jun  4 04:10 agis_schedconf.cvmfs.json
[2025-06-04 08:43:30] drwx------. 4 boinc boinc      4096 Jun  4 04:10 pilot3
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc 185477507 Jun  4 08:12 HITS.45006595._018488.pool.root.1
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc       531 Jun  4 08:12 boinc_task_state.xml
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc      1018 Jun  4 08:13 memory_monitor_summary.json
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc   1603667 Jun  4 08:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc    385283 Jun  4 08:13 log.45006595._018488.job.log.tgz.1
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc      7692 Jun  4 08:15 heartbeat.json
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc        95 Jun  4 08:15 pilot_heartbeat.json
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc      4540 Jun  4 08:15 pilotlog.txt
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc   1256701 Jun  4 08:15 log.45006595._018488.job.log.1
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc       357 Jun  4 08:15 output.list
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc       620 Jun  4 08:15 runtime_log
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc   1658880 Jun  4 08:15 result.tar.gz
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc      8673 Jun  4 08:15 runtime_log.err
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc       657 Jun  4 08:15 CpBODmyeXg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtnhKDm42mT0n.diag
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc      8192 Jun  4 08:43 boinc_mmap_file
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc        28 Jun  4 08:43 wrapper_checkpoint.txt
[2025-06-04 08:43:30] -rw-r--r--. 1 boinc boinc     20512 Jun  4 08:43 stderr.txt
[2025-06-04 08:43:30] HITS file was successfully produced:
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc 185477507 Jun  4 08:12 shared/HITS.pool.root.1
[2025-06-04 08:43:30]  *** Contents of shared directory: ***
[2025-06-04 08:43:30] total 392376
[2025-06-04 08:43:30] -rw-r--r--. 2 boinc boinc 214125709 Jun  4 03:36 ATLAS.root_0
[2025-06-04 08:43:30] -rw-r--r--. 2 boinc boinc    508881 Jun  4 03:36 input.tar.gz
[2025-06-04 08:43:30] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:36 start_atlas.sh
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc 185477507 Jun  4 08:12 HITS.pool.root.1
[2025-06-04 08:43:30] -rw-------. 1 boinc boinc   1658880 Jun  4 08:15 result.tar.gz
08:43:32 (21535): run_atlas exited; CPU time 51587.191002
08:43:32 (21535): called boinc_finish(0)

</stderr_txt>
]]>

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