Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:52:07 (1179064): wrapper (7.7.26015): starting
11:52:07 (1179064): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:52:07] Arguments: --nthreads 8
[2025-06-03 11:52:07] Threads: 8
[2025-06-03 11:52:07] Checking for CVMFS
[2025-06-03 11:52:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:52:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:52:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:52:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:52:07] 2.12.6.0 814677 89406 878520 146748 2 197 17138486 21551104 3304 16776704 1 293360389 99.329 535868328 27516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:52:07] CVMFS is ok
[2025-06-03 11:52:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:52:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:52:07] Further information can be found at the LHC@home message board.
[2025-06-03 11:52:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:52:07] Checking for apptainer binary...
[2025-06-03 11:52:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:52:07] Running /usr/bin/apptainer --version
[2025-06-03 11:52:07] apptainer version 1.4.1-1.el9
[2025-06-03 11:52:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:52:07] c-16-30.aglt2.org
[2025-06-03 11:52:07] apptainer works
[2025-06-03 11:52:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:52:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:52:07] Starting ATLAS job with PandaID=6677621499
[2025-06-03 11:52:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:40:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:40:45] 2025-06-03 18:40:29,184 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 14:40:45] 2025-06-03 18:40:29,188 | INFO     | using path: /var/lib/condor/boinchome/slots/2/PanDA_Pilot-6677621499/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,190 | INFO     | extracted standard info from prmon json
[2025-06-03 14:40:45] 2025-06-03 18:40:29,190 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:40:45] 2025-06-03 18:40:29,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:40:45] 2025-06-03 18:40:29,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:40:45] 2025-06-03 18:40:29,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:40:45] 2025-06-03 18:40:29,200 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:40:45] 2025-06-03 18:40:29,201 | INFO     | sum of square deviations: 1392881930.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,202 | INFO     | sum of deviations: 51284833840.99999
[2025-06-03 14:40:45] 2025-06-03 18:40:29,202 | INFO     | mean x: 1748970967.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,202 | INFO     | mean y: 2047921.084848485
[2025-06-03 14:40:45] 2025-06-03 18:40:29,202 | INFO     | -- intersect: -64393708462.46453
[2025-06-03 14:40:45] 2025-06-03 18:40:29,203 | INFO     | intersect: -64393708462.46453
[2025-06-03 14:40:45] 2025-06-03 18:40:29,203 | INFO     | chi2: 4.100218453399509
[2025-06-03 14:40:45] 2025-06-03 18:40:29,204 | INFO     | sum of square deviations: 1270051720.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,205 | INFO     | sum of deviations: 57117146565.00001
[2025-06-03 14:40:45] 2025-06-03 18:40:29,205 | INFO     | mean x: 1748970814.5
[2025-06-03 14:40:45] 2025-06-03 18:40:29,205 | INFO     | mean y: 2055072.1625
[2025-06-03 14:40:45] 2025-06-03 18:40:29,205 | INFO     | -- intersect: -78653184534.69691
[2025-06-03 14:40:45] 2025-06-03 18:40:29,206 | INFO     | intersect: -78653184534.69691
[2025-06-03 14:40:45] 2025-06-03 18:40:29,206 | INFO     | chi2: 3.9271414526548476
[2025-06-03 14:40:45] 2025-06-03 18:40:29,206 | INFO     | current chi2=3.9271414526548476 (change=4.221165352815835 %)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,206 | INFO     | right removable region: 159
[2025-06-03 14:40:45] 2025-06-03 18:40:29,207 | INFO     | sum of square deviations: 1270051720.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,208 | INFO     | sum of deviations: 15991472903.500004
[2025-06-03 14:40:45] 2025-06-03 18:40:29,208 | INFO     | mean x: 1748971119.5
[2025-06-03 14:40:45] 2025-06-03 18:40:29,208 | INFO     | mean y: 2091606.74375
[2025-06-03 14:40:45] 2025-06-03 18:40:29,208 | INFO     | -- intersect: -22019550367.402245
[2025-06-03 14:40:45] 2025-06-03 18:40:29,209 | INFO     | intersect: -22019550367.402245
[2025-06-03 14:40:45] 2025-06-03 18:40:29,209 | INFO     | chi2: 1.4317155544845976
[2025-06-03 14:40:45] 2025-06-03 18:40:29,209 | INFO     | current chi2=1.4317155544845976 (change=65.08196890588705 %)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,210 | INFO     | sum of square deviations: 1154663510.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,211 | INFO     | sum of deviations: -7151059097.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,211 | INFO     | mean x: 1748971272.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,211 | INFO     | mean y: 2122122.290322581
[2025-06-03 14:40:45] 2025-06-03 18:40:29,211 | INFO     | -- intersect: 10833846530.92541
[2025-06-03 14:40:45] 2025-06-03 18:40:29,211 | INFO     | intersect: 10833846530.92541
[2025-06-03 14:40:45] 2025-06-03 18:40:29,212 | INFO     | chi2: 0.3202030822556793
[2025-06-03 14:40:45] 2025-06-03 18:40:29,212 | INFO     | current chi2=0.3202030822556793 (change=77.63500708973237 %)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,212 | INFO     | sum of square deviations: 1046484737.5
[2025-06-03 14:40:45] 2025-06-03 18:40:29,213 | INFO     | sum of deviations: -11055498632.5
[2025-06-03 14:40:45] 2025-06-03 18:40:29,213 | INFO     | mean x: 1748971424.5
[2025-06-03 14:40:45] 2025-06-03 18:40:29,214 | INFO     | mean y: 2127542.5
[2025-06-03 14:40:45] 2025-06-03 18:40:29,214 | INFO     | -- intersect: 18478986782.734573
[2025-06-03 14:40:45] 2025-06-03 18:40:29,214 | INFO     | intersect: 18478986782.734573
[2025-06-03 14:40:45] 2025-06-03 18:40:29,214 | INFO     | chi2: 0.250433905265144
[2025-06-03 14:40:45] 2025-06-03 18:40:29,214 | INFO     | current chi2=0.250433905265144 (change=21.789039786576836 %)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,215 | INFO     | left removable region: 30
[2025-06-03 14:40:45] 2025-06-03 18:40:29,215 | INFO     | sum of square deviations: 665612480.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,216 | INFO     | sum of deviations: -2007269965.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,216 | INFO     | mean x: 1748971699.0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,216 | INFO     | mean y: 2135924.968992248
[2025-06-03 14:40:45] 2025-06-03 18:40:29,216 | INFO     | -- intersect: 5276463655.479274
[2025-06-03 14:40:45] 2025-06-03 18:40:29,217 | INFO     | intersect: 5276463655.479274
[2025-06-03 14:40:45] 2025-06-03 18:40:29,217 | INFO     | chi2: 0.10450021843116615
[2025-06-03 14:40:45] 2025-06-03 18:40:29,217 | INFO     | -- intersect: 5276463655.479274
[2025-06-03 14:40:45] 2025-06-03 18:40:29,218 | INFO     | current memory leak: -3.02 B/s (using 129 data points, chi2=0.10)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,218 | INFO     | ..............................
[2025-06-03 14:40:45] 2025-06-03 18:40:29,218 | INFO     | . Timing measurements:
[2025-06-03 14:40:45] 2025-06-03 18:40:29,219 | INFO     | . get job = 0 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,219 | INFO     | . initial setup = 2 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,219 | INFO     | . payload setup = 6 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,219 | INFO     | . stage-in = 0 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,220 | INFO     | . payload execution = 10050 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,220 | INFO     | . stage-out = 1 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,220 | INFO     | . log creation = 0 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,220 | INFO     | ..............................
[2025-06-03 14:40:45] 2025-06-03 18:40:29,386 | INFO     | 
[2025-06-03 14:40:45] 2025-06-03 18:40:29,387 | INFO     | job summary report
[2025-06-03 14:40:45] 2025-06-03 18:40:29,387 | INFO     | --------------------------------------------------
[2025-06-03 14:40:45] 2025-06-03 18:40:29,387 | INFO     | PanDA job id: 6677621499
[2025-06-03 14:40:45] 2025-06-03 18:40:29,387 | INFO     | task id: 45006595
[2025-06-03 14:40:45] 2025-06-03 18:40:29,387 | INFO     | errors: (none)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | pilot state: finished 
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | transexitcode: 0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | exeerrorcode: 0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | exeerrordiag: 
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | exitcode: 0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,388 | INFO     | exitmsg: OK
[2025-06-03 14:40:45] 2025-06-03 18:40:29,389 | INFO     | cpuconsumptiontime: 63756 s
[2025-06-03 14:40:45] 2025-06-03 18:40:29,389 | INFO     | nevents: 400
[2025-06-03 14:40:45] 2025-06-03 18:40:29,389 | INFO     | neventsw: 0
[2025-06-03 14:40:45] 2025-06-03 18:40:29,389 | INFO     | pid: 1190479
[2025-06-03 14:40:45] 2025-06-03 18:40:29,389 | INFO     | pgrp: 1190479
[2025-06-03 14:40:45] 2025-06-03 18:40:29,389 | INFO     | corecount: 8
[2025-06-03 14:40:45] 2025-06-03 18:40:29,390 | INFO     | event service: False
[2025-06-03 14:40:45] 2025-06-03 18:40:29,390 | INFO     | sizes: {0: 2404968, 1: 2405223, 2: 2405223, 5: 2405457, 12: 2405513, 10061: 2433982, 10063: 2442945, 10066: 2443001, 10075: 2443171}
[2025-06-03 14:40:45] 2025-06-03 18:40:29,390 | INFO     | --------------------------------------------------
[2025-06-03 14:40:45] 2025-06-03 18:40:29,390 | INFO     | 
[2025-06-03 14:40:45] 2025-06-03 18:40:29,390 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/2
[2025-06-03 14:40:45] 2025-06-03 18:40:29,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,413 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,414 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,414 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:40:45] 2025-06-03 18:40:29,416 | INFO     | job 6677621499 has completed (purged errors)
[2025-06-03 14:40:45] 2025-06-03 18:40:29,416 | INFO     | overall cleanup function is called
[2025-06-03 14:40:45] 2025-06-03 18:40:30,425 | INFO     | --- collectZombieJob: --- 10, [1190479]
[2025-06-03 14:40:45] 2025-06-03 18:40:30,425 | INFO     | zombie collector waiting for pid 1190479
[2025-06-03 14:40:45] 2025-06-03 18:40:30,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:40:45] 2025-06-03 18:40:30,425 | INFO     | collected zombie processes
[2025-06-03 14:40:45] 2025-06-03 18:40:30,425 | INFO     | will attempt to kill all subprocesses of pid=1190479
[2025-06-03 14:40:45] 2025-06-03 18:40:30,924 | INFO     | process IDs to be killed: [1190479] (in reverse order)
[2025-06-03 14:40:45] 2025-06-03 18:40:31,129 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:40:45] 2025-06-03 18:40:31,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:40:45] 2025-06-03 18:40:31,151 | INFO     | did not find any defunct processes belonging to 1190479
[2025-06-03 14:40:45] 2025-06-03 18:40:31,172 | INFO     | did not find any defunct processes belonging to 1190479
[2025-06-03 14:40:45] 2025-06-03 18:40:31,173 | INFO     | ready for new job
[2025-06-03 14:40:45] 2025-06-03 18:40:31,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:40:45] 2025-06-03 18:40:31,175 | INFO     | **************************************
[2025-06-03 14:40:45] 2025-06-03 18:40:31,175 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:40:45] 2025-06-03 18:40:31,175 | INFO     | **************************************
[2025-06-03 14:40:45] 2025-06-03 18:40:31,175 | INFO     | 
[2025-06-03 14:40:45] 2025-06-03 18:40:31,190 | INFO     | architecture information:
[2025-06-03 14:40:45] 2025-06-03 18:40:31,190 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:40:45] 2025-06-03 18:40:31,228 | INFO     | cat /etc/os-release:
[2025-06-03 14:40:45] NAME="CentOS Linux"
[2025-06-03 14:40:45] VERSION="7 (Core)"
[2025-06-03 14:40:45] ID="centos"
[2025-06-03 14:40:45] ID_LIKE="rhel fedora"
[2025-06-03 14:40:45] VERSION_ID="7"
[2025-06-03 14:40:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:40:45] ANSI_COLOR="0;31"
[2025-06-03 14:40:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:40:45] HOME_URL="https://www.centos.org/"
[2025-06-03 14:40:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:40:45] 
[2025-06-03 14:40:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:40:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:40:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:40:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:40:45] 
[2025-06-03 14:40:45] 2025-06-03 18:40:31,229 | INFO     | **************************************
[2025-06-03 14:40:45] 2025-06-03 18:40:31,735 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/2
[2025-06-03 14:40:45] 2025-06-03 18:40:31,797 | INFO     | sufficient remaining disk space (1859801579520 B)
[2025-06-03 14:40:45] 2025-06-03 18:40:31,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:40:45] 2025-06-03 18:40:31,798 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:40:45] 2025-06-03 18:40:31,798 | INFO     | update_server=False
[2025-06-03 14:40:45] 2025-06-03 18:40:31,798 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:40:45] 2025-06-03 18:40:31,798 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:40:45] 2025-06-03 18:40:31,799 | INFO     | aborting loop
[2025-06-03 14:40:45] 2025-06-03 18:40:32,294 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:40:45] 2025-06-03 18:40:32,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:40:45] 2025-06-03 18:40:32,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:40:45] 2025-06-03 18:40:32,755 | INFO     | all data control threads have been joined
[2025-06-03 14:40:45] 2025-06-03 18:40:32,804 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:32,804 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:32,871 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:32,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:40:45] 2025-06-03 18:40:33,103 | INFO     | all payload control threads have been joined
[2025-06-03 14:40:45] 2025-06-03 18:40:33,204 | INFO     | all job control threads have been joined
[2025-06-03 14:40:45] 2025-06-03 18:40:33,376 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:33,445 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:33,453 | INFO     | [job] validate thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:33,459 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:33,504 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:33,760 | INFO     | [data] control thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:33,800 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:34,109 | INFO     | [payload] control thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:34,212 | INFO     | [job] control thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:34,263 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:34,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:40:45] 2025-06-03 18:40:34,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:40:45] 2025-06-03 18:40:34,892 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:35,407 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:38,800 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:40:45] 2025-06-03 18:40:39,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934498973504)>', '<ExcThread(monitor, started 139933784205056)>']
[2025-06-03 14:40:45] 2025-06-03 18:40:40,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:40:45] 2025-06-03 18:40:40,340 | INFO     | [monitor] control thread has ended
[2025-06-03 14:40:45] 2025-06-03 18:40:44,571 | INFO     | all workflow threads have been joined
[2025-06-03 14:40:45] 2025-06-03 18:40:44,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:40:45] 2025-06-03 18:40:44,571 | INFO     | traces error code: 0
[2025-06-03 14:40:45] 2025-06-03 18:40:44,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:40:45] 2025-06-03 18:40:44,933 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:40:45] 2025-06-03 18:40:44,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:40:45] 2025-06-03 18:40:44,949 [wrapper] pilotpid: 1182710
[2025-06-03 14:40:45] 2025-06-03 18:40:44,974 [wrapper] Pilot exit status: 0
[2025-06-03 14:40:45] 2025-06-03 18:40:44,998 [wrapper] pandaids: 6677621499
[2025-06-03 14:40:45] 2025-06-03 18:40:45,102 [wrapper] cleanup supervisor_pilot 1773734 1182711
[2025-06-03 14:40:45] 2025-06-03 18:40:45,112 [wrapper] Test setup, not cleaning
[2025-06-03 14:40:45] 2025-06-03 18:40:45,117 [wrapper] apfmon messages muted
[2025-06-03 14:40:45] 2025-06-03 18:40:45,122 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:40:45] 2025-06-03 18:40:45,127 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:40:45]  *** Error codes and diagnostics ***
[2025-06-03 14:40:45]     "exeErrorCode": 0,
[2025-06-03 14:40:45]     "exeErrorDiag": "",
[2025-06-03 14:40:45]     "pilotErrorCode": 0,
[2025-06-03 14:40:45]     "pilotErrorDiag": "",
[2025-06-03 14:40:45]  *** Listing of results directory ***
[2025-06-03 14:40:45] total 392596
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:16 queuedata.json
[2025-06-03 14:40:45] -rwx------. 1 boincer umatlas     37140 Jun  3 09:17 runpilot2-wrapper.sh
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:40:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:52 run_atlas
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:52 job.xml
[2025-06-03 14:40:45] -rw-r--r--. 2 boincer umatlas 216774173 Jun  3 11:52 EVNT.45006593._001352.pool.root.1
[2025-06-03 14:40:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:52 start_atlas.sh
[2025-06-03 14:40:45] drwxrwx--x. 2 boincer umatlas        68 Jun  3 11:52 shared
[2025-06-03 14:40:45] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 11:52 input.tar.gz
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:52 boinc_lockfile
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:52 pandaJob.out
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas    983735 Jun  3 11:52 agis_schedconf.cvmfs.json
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:52 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:40:45] drwx------. 4 boincer umatlas      4096 Jun  3 11:52 pilot3
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas      6550 Jun  3 14:37 init_data.xml
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas 178818681 Jun  3 14:39 HITS.45006595._033605.pool.root.1
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas       530 Jun  3 14:39 boinc_task_state.xml
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas        95 Jun  3 14:39 pilot_heartbeat.json
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas      1034 Jun  3 14:40 memory_monitor_summary.json
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas    359373 Jun  3 14:40 log.45006595._033605.job.log.tgz.1
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 14:40 boinc_mmap_file
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas        27 Jun  3 14:40 wrapper_checkpoint.txt
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas      7705 Jun  3 14:40 heartbeat.json
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas      4366 Jun  3 14:40 pilotlog.txt
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas    944057 Jun  3 14:40 log.45006595._033605.job.log.1
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas       357 Jun  3 14:40 output.list
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas       620 Jun  3 14:40 runtime_log
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas   1320960 Jun  3 14:40 result.tar.gz
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas      8809 Jun  3 14:40 runtime_log.err
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas       654 Jun  3 14:40 0vmMDmChgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiJkKDme1DBIn.diag
[2025-06-03 14:40:45] -rw-r--r--. 1 boincer umatlas     20852 Jun  3 14:40 stderr.txt
[2025-06-03 14:40:45] HITS file was successfully produced:
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas 178818681 Jun  3 14:39 shared/HITS.pool.root.1
[2025-06-03 14:40:45]  *** Contents of shared directory: ***
[2025-06-03 14:40:45] total 388132
[2025-06-03 14:40:45] -rw-r--r--. 2 boincer umatlas 216774173 Jun  3 11:52 ATLAS.root_0
[2025-06-03 14:40:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:52 start_atlas.sh
[2025-06-03 14:40:45] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 11:52 input.tar.gz
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas 178818681 Jun  3 14:39 HITS.pool.root.1
[2025-06-03 14:40:45] -rw-------. 1 boincer umatlas   1320960 Jun  3 14:40 result.tar.gz
14:40:46 (1179064): run_atlas exited; CPU time 64174.305761
14:40:46 (1179064): called boinc_finish(0)

</stderr_txt>
]]>

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