Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:28:10 (27560): wrapper (7.7.26015): starting
02:28:10 (27560): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:28:10] Arguments: --nthreads 8
[2025-06-04 02:28:10] Threads: 8
[2025-06-04 02:28:10] Checking for CVMFS
[2025-06-04 02:28:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:28:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:28:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:28:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:28:12] 2.11.2.0 16765 32503 91332 146762 0 16 13949026 25165824 3514 130560 0 15576994 99.779 19162395 2061 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:28:12] CVMFS is ok
[2025-06-04 02:28:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:28:12] Checking for apptainer binary...
[2025-06-04 02:28:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:28:12] Running /usr/bin/apptainer --version
[2025-06-04 02:28:13] apptainer version 1.3.2-1.el7
[2025-06-04 02:28:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:28:20] cg-vwn404.simple-grid.lan
[2025-06-04 02:28:20] apptainer works
[2025-06-04 02:28:20] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:28:20] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:28:20] Starting ATLAS job with PandaID=6677546587
[2025-06-04 02:28:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:33:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:33:32] 2025-06-04 04:23:10,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:33:32] 2025-06-04 04:23:10,828 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:33:32] 2025-06-04 04:23:10,832 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:33:32] 2025-06-04 04:23:10,833 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 06:33:32] 2025-06-04 04:23:10,835 | INFO     | sum of deviations: 20760638374.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,842 | INFO     | mean x: 1749004207.5
[2025-06-04 06:33:32] 2025-06-04 04:23:10,843 | INFO     | mean y: 2505489.23853211
[2025-06-04 06:33:32] 2025-06-04 04:23:10,843 | INFO     | -- intersect: -11300470149.936869
[2025-06-04 06:33:32] 2025-06-04 04:23:10,843 | INFO     | intersect: -11300470149.936869
[2025-06-04 06:33:32] 2025-06-04 04:23:10,843 | INFO     | chi2: 4.816230286706168
[2025-06-04 06:33:32] 2025-06-04 04:23:10,844 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,845 | INFO     | sum of deviations: 21023654147.999996
[2025-06-04 06:33:32] 2025-06-04 04:23:10,845 | INFO     | mean x: 1749004055.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,846 | INFO     | mean y: 2505674.9765258217
[2025-06-04 06:33:32] 2025-06-04 04:23:10,846 | INFO     | -- intersect: -12268816495.964134
[2025-06-04 06:33:32] 2025-06-04 04:23:10,846 | INFO     | intersect: -12268816495.964134
[2025-06-04 06:33:32] 2025-06-04 04:23:10,846 | INFO     | chi2: 4.822078759125949
[2025-06-04 06:33:32] 2025-06-04 04:23:10,846 | INFO     | current chi2=4.822078759125949 (change=-0.12143257426713934 %)
[2025-06-04 06:33:32] 2025-06-04 04:23:10,846 | INFO     | right removable region: 212
[2025-06-04 06:33:32] 2025-06-04 04:23:10,847 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,848 | INFO     | sum of deviations: -49760774216.99999
[2025-06-04 06:33:32] 2025-06-04 04:23:10,849 | INFO     | mean x: 1749004360.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,849 | INFO     | mean y: 2555182.7417840376
[2025-06-04 06:33:32] 2025-06-04 04:23:10,849 | INFO     | -- intersect: 29047486862.000195
[2025-06-04 06:33:32] 2025-06-04 04:23:10,849 | INFO     | intersect: 29047486862.000195
[2025-06-04 06:33:32] 2025-06-04 04:23:10,849 | INFO     | chi2: 0.7259304861936628
[2025-06-04 06:33:32] 2025-06-04 04:23:10,849 | INFO     | current chi2=0.7259304861936628 (change=84.92741328840965 %)
[2025-06-04 06:33:32] 2025-06-04 04:23:10,850 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,851 | INFO     | sum of deviations: -68493488086.99999
[2025-06-04 06:33:32] 2025-06-04 04:23:10,852 | INFO     | mean x: 1749004512.5
[2025-06-04 06:33:32] 2025-06-04 04:23:10,852 | INFO     | mean y: 2568912.403846154
[2025-06-04 06:33:32] 2025-06-04 04:23:10,852 | INFO     | -- intersect: 42934638343.885086
[2025-06-04 06:33:32] 2025-06-04 04:23:10,852 | INFO     | intersect: 42934638343.885086
[2025-06-04 06:33:32] 2025-06-04 04:23:10,852 | INFO     | chi2: 0.21371992845316223
[2025-06-04 06:33:32] 2025-06-04 04:23:10,852 | INFO     | current chi2=0.21371992845316223 (change=70.55917439508853 %)
[2025-06-04 06:33:32] 2025-06-04 04:23:10,853 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,874 | INFO     | sum of deviations: -66697135687.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,875 | INFO     | mean x: 1749004665.0
[2025-06-04 06:33:32] 2025-06-04 04:23:10,875 | INFO     | mean y: 2567483.950738916
[2025-06-04 06:33:32] 2025-06-04 04:23:10,875 | INFO     | -- intersect: 44974562368.858246
[2025-06-04 06:33:32] 2025-06-04 04:23:10,875 | INFO     | intersect: 44974562368.858246
[2025-06-04 06:33:32] 2025-06-04 04:23:10,875 | INFO     | chi2: 0.19850293253712326
[2025-06-04 06:33:32] 2025-06-04 04:23:10,876 | INFO     | current chi2=0.19850293253712326 (change=7.120064107345916 %)
[2025-06-04 06:33:32] 2025-06-04 04:23:10,876 | INFO     | left removable region: 30
[2025-06-04 06:33:32] 2025-06-04 04:23:10,876 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 06:33:32] 2025-06-04 04:23:10,878 | INFO     | sum of deviations: -47402083648.5
[2025-06-04 06:33:32] 2025-06-04 04:23:10,878 | INFO     | mean x: 1749004939.5
[2025-06-04 06:33:32] 2025-06-04 04:23:10,878 | INFO     | mean y: 2554299.1703296704
[2025-06-04 06:33:32] 2025-06-04 04:23:10,878 | INFO     | -- intersect: 44354123661.880936
[2025-06-04 06:33:32] 2025-06-04 04:23:10,878 | INFO     | intersect: 44354123661.880936
[2025-06-04 06:33:32] 2025-06-04 04:23:10,878 | INFO     | chi2: 0.18670265046593285
[2025-06-04 06:33:32] 2025-06-04 04:23:10,879 | INFO     | -- intersect: 44354123661.880936
[2025-06-04 06:33:32] 2025-06-04 04:23:10,879 | INFO     | current memory leak: -25.36 B/s (using 182 data points, chi2=0.19)
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | ..............................
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . Timing measurements:
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . get job = 0 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . initial setup = 9 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . payload setup = 150 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . stage-in = 0 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . payload execution = 13446 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . stage-out = 4 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | . log creation = 1 s
[2025-06-04 06:33:32] 2025-06-04 04:23:10,880 | INFO     | ..............................
[2025-06-04 06:33:32] 2025-06-04 04:23:11,087 | INFO     | 
[2025-06-04 06:33:32] 2025-06-04 04:23:11,087 | INFO     | job summary report
[2025-06-04 06:33:32] 2025-06-04 04:23:11,087 | INFO     | --------------------------------------------------
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | PanDA job id: 6677546587
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | task id: 45006595
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | errors: (none)
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | pilot state: finished 
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | transexitcode: 0
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | exeerrorcode: 0
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | exeerrordiag: 
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | exitcode: 0
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | exitmsg: OK
[2025-06-04 06:33:32] 2025-06-04 04:23:11,088 | INFO     | cpuconsumptiontime: 48445 s
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | nevents: 400
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | neventsw: 0
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | pid: 6009
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | pgrp: 6009
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | corecount: 8
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | event service: False
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 76: 2405508, 87: 2405564, 94: 2405798, 98: 2406106, 1
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | --------------------------------------------------
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | 
[2025-06-04 06:33:32] 2025-06-04 04:23:11,089 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:33:32] 2025-06-04 04:23:11,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:33:32] 2025-06-04 04:23:11,626 | INFO     | job 6677546587 has completed (purged errors)
[2025-06-04 06:33:32] 2025-06-04 04:23:11,626 | INFO     | overall cleanup function is called
[2025-06-04 06:33:32] 2025-06-04 04:23:12,635 | INFO     | --- collectZombieJob: --- 10, [6009]
[2025-06-04 06:33:32] 2025-06-04 04:23:12,635 | INFO     | zombie collector waiting for pid 6009
[2025-06-04 06:33:32] 2025-06-04 04:23:12,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:33:32] 2025-06-04 04:23:12,636 | INFO     | collected zombie processes
[2025-06-04 06:33:32] 2025-06-04 04:23:12,636 | INFO     | will attempt to kill all subprocesses of pid=6009
[2025-06-04 06:33:32] 2025-06-04 04:23:12,776 | INFO     | process IDs to be killed: [6009] (in reverse order)
[2025-06-04 06:33:32] 2025-06-04 04:23:13,626 | INFO     | PID=31795 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 06:33:32] 2025-06-04 04:23:13,626 | INFO     | .. there are 9 such processes running
[2025-06-04 06:33:32] 2025-06-04 04:23:13,799 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:33:32] 2025-06-04 04:23:13,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:33:32] 2025-06-04 04:23:13,803 | INFO     | did not find any defunct processes belonging to 6009
[2025-06-04 06:33:32] 2025-06-04 04:23:13,806 | INFO     | did not find any defunct processes belonging to 6009
[2025-06-04 06:33:32] 2025-06-04 04:23:13,806 | INFO     | ready for new job
[2025-06-04 06:33:32] 2025-06-04 04:23:13,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:33:32] 2025-06-04 04:23:13,808 | INFO     | **************************************
[2025-06-04 06:33:32] 2025-06-04 04:23:13,808 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:33:32] 2025-06-04 04:23:13,808 | INFO     | **************************************
[2025-06-04 06:33:32] 2025-06-04 04:23:13,808 | INFO     | 
[2025-06-04 06:33:32] 2025-06-04 04:23:13,809 | INFO     | pilot is running in a VM
[2025-06-04 06:33:32] 2025-06-04 04:23:13,809 | INFO     | architecture information:
[2025-06-04 06:33:32] 2025-06-04 04:23:13,816 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:33:32] 2025-06-04 04:23:14,057 | INFO     | cat /etc/os-release:
[2025-06-04 06:33:32] NAME="CentOS Linux"
[2025-06-04 06:33:32] VERSION="7 (Core)"
[2025-06-04 06:33:32] ID="centos"
[2025-06-04 06:33:32] ID_LIKE="rhel fedora"
[2025-06-04 06:33:32] VERSION_ID="7"
[2025-06-04 06:33:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:33:32] ANSI_COLOR="0;31"
[2025-06-04 06:33:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:33:32] HOME_URL="https://www.centos.org/"
[2025-06-04 06:33:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:33:32] 
[2025-06-04 06:33:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:33:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:33:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:33:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:33:32] 
[2025-06-04 06:33:32] 2025-06-04 04:23:14,058 | INFO     | **************************************
[2025-06-04 06:33:32] 2025-06-04 04:23:14,560 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 06:33:32] 2025-06-04 04:23:14,821 | INFO     | sufficient remaining disk space (496998809600 B)
[2025-06-04 06:33:32] 2025-06-04 04:23:14,821 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:33:32] 2025-06-04 04:23:14,821 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:33:32] 2025-06-04 04:23:14,821 | INFO     | update_server=False
[2025-06-04 06:33:32] 2025-06-04 04:23:14,821 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:33:32] 2025-06-04 04:23:14,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:33:32] 2025-06-04 04:23:14,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:33:32] 2025-06-04 04:23:14,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:33:32] 2025-06-04 04:23:14,824 | INFO     | will abort loop
[2025-06-04 06:33:32] 2025-06-04 04:23:14,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:33:32] 2025-06-04 04:23:15,155 | INFO     | all data control threads have been joined
[2025-06-04 06:33:32] 2025-06-04 04:23:15,633 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:33:32] 2025-06-04 04:23:15,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:33:32] 2025-06-04 04:23:15,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:33:32] 2025-06-04 04:23:15,829 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:15,831 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:15,959 | INFO     | all payload control threads have been joined
[2025-06-04 06:33:32] 2025-06-04 04:23:16,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:33:32] 2025-06-04 04:23:16,155 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,161 | INFO     | [data] control thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,280 | INFO     | all job control threads have been joined
[2025-06-04 06:33:32] 2025-06-04 04:23:16,384 | INFO     | [job] validate thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,804 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,823 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,831 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:16,965 | INFO     | [payload] control thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:17,067 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:17,186 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:17,278 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:17,286 | INFO     | [job] control thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:17,307 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:17,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:33:32] 2025-06-04 04:23:21,372 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:33:32] 2025-06-04 04:23:22,621 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077892048704)>', '<ExcThread(monitor, started 140077447497472)>']
[2025-06-04 06:33:32] 2025-06-04 04:23:22,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:33:32] 2025-06-04 04:23:22,673 | INFO     | [monitor] control thread has ended
[2025-06-04 06:33:32] 2025-06-04 04:23:27,647 | INFO     | all workflow threads have been joined
[2025-06-04 06:33:32] 2025-06-04 04:23:27,647 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:33:32] 2025-06-04 04:23:27,648 | INFO     | traces error code: 0
[2025-06-04 06:33:32] 2025-06-04 04:23:27,648 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:33:32] 2025-06-04 04:23:27,936 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:33:32] 2025-06-04 04:23:28,024 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:33:32] 2025-06-04 04:23:28,078 [wrapper] pilotpid: 31795
[2025-06-04 06:33:32] 2025-06-04 04:23:28,162 [wrapper] Pilot exit status: 0
[2025-06-04 06:33:32] 2025-06-04 04:23:28,597 [wrapper] pandaids: 6677546587
[2025-06-04 06:33:32] 2025-06-04 04:23:29,286 [wrapper] cleanup supervisor_pilot 19196 31796
[2025-06-04 06:33:32] 2025-06-04 04:23:29,340 [wrapper] Test setup, not cleaning
[2025-06-04 06:33:32] 2025-06-04 04:23:29,400 [wrapper] apfmon messages muted
[2025-06-04 06:33:32] 2025-06-04 04:23:29,444 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:33:32] 2025-06-04 04:23:29,542 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:33:32]  *** Error codes and diagnostics ***
[2025-06-04 06:33:32]     "exeErrorCode": 0,
[2025-06-04 06:33:32]     "exeErrorDiag": "",
[2025-06-04 06:33:32]     "pilotErrorCode": 0,
[2025-06-04 06:33:32]     "pilotErrorDiag": "",
[2025-06-04 06:33:32]  *** Listing of results directory ***
[2025-06-04 06:33:32] total 388344
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:07 pilot3.tar.gz
[2025-06-04 06:33:32] -rwx------. 1 boinc boinc     37140 Jun  3 10:36 runpilot2-wrapper.sh
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc      5111 Jun  3 10:36 queuedata.json
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:33:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:28 run_atlas
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:28 job.xml
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc      6392 Jun  4 02:28 init_data.xml
[2025-06-04 06:33:32] -rw-r--r--. 2 boinc boinc 216258769 Jun  4 02:28 EVNT.45006593._001027.pool.root.1
[2025-06-04 06:33:32] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:28 start_atlas.sh
[2025-06-04 06:33:32] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:28 shared
[2025-06-04 06:33:32] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:28 input.tar.gz
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:28 boinc_lockfile
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:28 pandaJob.out
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc    986069 Jun  4 02:31 agis_schedconf.cvmfs.json
[2025-06-04 06:33:32] drwx------. 4 boinc boinc      4096 Jun  4 02:31 pilot3
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc 174424436 Jun  4 06:20 HITS.45006595._025690.pool.root.1
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:21 boinc_task_state.xml
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc      1017 Jun  4 06:21 memory_monitor_summary.json
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc   1603667 Jun  4 06:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc    395593 Jun  4 06:21 log.45006595._025690.job.log.tgz.1
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc        95 Jun  4 06:22 pilot_heartbeat.json
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc      7711 Jun  4 06:23 heartbeat.json
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc      4602 Jun  4 06:23 pilotlog.txt
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc   1185273 Jun  4 06:23 log.45006595._025690.job.log.1
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc       357 Jun  4 06:23 output.list
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:23 runtime_log
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc   1597440 Jun  4 06:23 result.tar.gz
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc      8659 Jun  4 06:23 runtime_log.err
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc       657 Jun  4 06:23 8rbNDmdJcg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcyXKDm0eAxEo.diag
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:33 boinc_mmap_file
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:33 wrapper_checkpoint.txt
[2025-06-04 06:33:32] -rw-r--r--. 1 boinc boinc     20612 Jun  4 06:33 stderr.txt
[2025-06-04 06:33:32] HITS file was successfully produced:
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc 174424436 Jun  4 06:20 shared/HITS.pool.root.1
[2025-06-04 06:33:32]  *** Contents of shared directory: ***
[2025-06-04 06:33:32] total 383608
[2025-06-04 06:33:32] -rw-r--r--. 2 boinc boinc 216258769 Jun  4 02:28 ATLAS.root_0
[2025-06-04 06:33:32] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:28 start_atlas.sh
[2025-06-04 06:33:32] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:28 input.tar.gz
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc 174424436 Jun  4 06:20 HITS.pool.root.1
[2025-06-04 06:33:32] -rw-------. 1 boinc boinc   1597440 Jun  4 06:23 result.tar.gz
06:33:34 (27560): run_atlas exited; CPU time 48638.455144
06:33:34 (27560): called boinc_finish(0)

</stderr_txt>
]]>

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