Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:51:28 (3962): wrapper (7.7.26015): starting
11:51:28 (3962): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:51:28] Arguments: --nthreads 8
[2025-06-03 11:51:28] Threads: 8
[2025-06-03 11:51:28] Checking for CVMFS
[2025-06-03 11:51:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:51:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:51:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:51:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:51:29] 2.11.2.0 2891 34445 71840 146748 1 56 17804706 20275201 1 130560 0 10533421 99.975 6148448 7530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 11:51:29] CVMFS is ok
[2025-06-03 11:51:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:51:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:51:29] Further information can be found at the LHC@home message board.
[2025-06-03 11:51:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:51:29] Checking for apptainer binary...
[2025-06-03 11:51:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:51:29] Running /usr/bin/apptainer --version
[2025-06-03 11:51:29] apptainer version 1.3.2-1.el7
[2025-06-03 11:51:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:51:30] c-115-14.aglt2.org
[2025-06-03 11:51:30] apptainer works
[2025-06-03 11:51:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:51:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:51:30] Starting ATLAS job with PandaID=6677621325
[2025-06-03 11:51:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:34:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:34:08] 2025-06-03 17:33:48,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:34:08] 2025-06-03 17:33:51,142 | INFO     | monitor loop #456: job 0:6677621325 is in state 'finished'
[2025-06-03 13:34:08] 2025-06-03 17:33:51,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,646 | INFO     | monitor loop #457: job 0:6677621325 is in state 'finished'
[2025-06-03 13:34:08] 2025-06-03 17:33:53,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,858 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 13:34:08] 2025-06-03 17:33:53,859 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677621325/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,860 | INFO     | extracted standard info from prmon json
[2025-06-03 13:34:08] 2025-06-03 17:33:53,860 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:34:08] 2025-06-03 17:33:53,861 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:34:08] 2025-06-03 17:33:53,861 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:34:08] 2025-06-03 17:33:53,861 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:34:08] 2025-06-03 17:33:53,865 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:34:08] 2025-06-03 17:33:53,865 | INFO     | sum of square deviations: 310052325.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,866 | INFO     | sum of deviations: 2443642249.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,866 | INFO     | mean x: 1748968957.5
[2025-06-03 13:34:08] 2025-06-03 17:33:53,866 | INFO     | mean y: 2498138.54
[2025-06-03 13:34:08] 2025-06-03 17:33:53,866 | INFO     | -- intersect: -13781802420.201126
[2025-06-03 13:34:08] 2025-06-03 17:33:53,867 | INFO     | intersect: -13781802420.201126
[2025-06-03 13:34:08] 2025-06-03 17:33:53,867 | INFO     | chi2: 1.5446950307751646
[2025-06-03 13:34:08] 2025-06-03 17:33:53,867 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,868 | INFO     | sum of deviations: 2465791654.000002
[2025-06-03 13:34:08] 2025-06-03 17:33:53,868 | INFO     | mean x: 1748968805.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,868 | INFO     | mean y: 2498216.789473684
[2025-06-03 13:34:08] 2025-06-03 17:33:53,868 | INFO     | -- intersect: -16220731799.988865
[2025-06-03 13:34:08] 2025-06-03 17:33:53,868 | INFO     | intersect: -16220731799.988865
[2025-06-03 13:34:08] 2025-06-03 17:33:53,869 | INFO     | chi2: 1.5471887646951135
[2025-06-03 13:34:08] 2025-06-03 17:33:53,869 | INFO     | current chi2=1.5471887646951135 (change=-0.1614385927491123 %)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,869 | INFO     | right removable region: 94
[2025-06-03 13:34:08] 2025-06-03 17:33:53,869 | INFO     | sum of square deviations: 265828240.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,870 | INFO     | sum of deviations: -11236847454.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,870 | INFO     | mean x: 1748969110.0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,870 | INFO     | mean y: 2544020.252631579
[2025-06-03 13:34:08] 2025-06-03 17:33:53,870 | INFO     | -- intersect: 73933361494.07762
[2025-06-03 13:34:08] 2025-06-03 17:33:53,870 | INFO     | intersect: 73933361494.07762
[2025-06-03 13:34:08] 2025-06-03 17:33:53,870 | INFO     | chi2: 0.09433956070407955
[2025-06-03 13:34:08] 2025-06-03 17:33:53,871 | INFO     | current chi2=0.09433956070407955 (change=93.89267403438608 %)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,871 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 13:34:08] 2025-06-03 17:33:53,871 | INFO     | sum of deviations: -8529117203.500004
[2025-06-03 13:34:08] 2025-06-03 17:33:53,871 | INFO     | mean x: 1748969262.5
[2025-06-03 13:34:08] 2025-06-03 17:33:53,872 | INFO     | mean y: 2533605.5222222223
[2025-06-03 13:34:08] 2025-06-03 17:33:53,872 | INFO     | -- intersect: 66001012609.61432
[2025-06-03 13:34:08] 2025-06-03 17:33:53,872 | INFO     | intersect: 66001012609.61432
[2025-06-03 13:34:08] 2025-06-03 17:33:53,872 | INFO     | chi2: 0.08964554040300036
[2025-06-03 13:34:08] 2025-06-03 17:33:53,872 | INFO     | current chi2=0.08964554040300036 (change=4.975664785850755 %)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,872 | INFO     | left removable region: 20
[2025-06-03 13:34:08] 2025-06-03 17:33:53,873 | INFO     | sum of square deviations: 125630262.5
[2025-06-03 13:34:08] 2025-06-03 17:33:53,873 | INFO     | sum of deviations: -2013577273.5
[2025-06-03 13:34:08] 2025-06-03 17:33:53,873 | INFO     | mean x: 1748969384.5
[2025-06-03 13:34:08] 2025-06-03 17:33:53,873 | INFO     | mean y: 2505068.9864864866
[2025-06-03 13:34:08] 2025-06-03 17:33:53,873 | INFO     | -- intersect: 28034644257.396473
[2025-06-03 13:34:08] 2025-06-03 17:33:53,873 | INFO     | intersect: 28034644257.396473
[2025-06-03 13:34:08] 2025-06-03 17:33:53,874 | INFO     | chi2: 0.043047867604350636
[2025-06-03 13:34:08] 2025-06-03 17:33:53,874 | INFO     | -- intersect: 28034644257.396473
[2025-06-03 13:34:08] 2025-06-03 17:33:53,874 | INFO     | current memory leak: -16.03 B/s (using 74 data points, chi2=0.04)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,874 | INFO     | ..............................
[2025-06-03 13:34:08] 2025-06-03 17:33:53,874 | INFO     | . Timing measurements:
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . get job = 0 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . initial setup = 2 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . payload setup = 11 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . stage-in = 0 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . payload execution = 6089 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . stage-out = 0 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | . log creation = 0 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,875 | INFO     | ..............................
[2025-06-03 13:34:08] 2025-06-03 17:33:53,959 | INFO     | 
[2025-06-03 13:34:08] 2025-06-03 17:33:53,960 | INFO     | job summary report
[2025-06-03 13:34:08] 2025-06-03 17:33:53,960 | INFO     | --------------------------------------------------
[2025-06-03 13:34:08] 2025-06-03 17:33:53,960 | INFO     | PanDA job id: 6677621325
[2025-06-03 13:34:08] 2025-06-03 17:33:53,960 | INFO     | task id: 45006595
[2025-06-03 13:34:08] 2025-06-03 17:33:53,960 | INFO     | errors: (none)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:34:08] 2025-06-03 17:33:53,961 | INFO     | pilot state: finished 
[2025-06-03 13:34:08] 2025-06-03 17:33:53,961 | INFO     | transexitcode: 0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,961 | INFO     | exeerrorcode: 0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,961 | INFO     | exeerrordiag: 
[2025-06-03 13:34:08] 2025-06-03 17:33:53,962 | INFO     | exitcode: 0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,962 | INFO     | exitmsg: OK
[2025-06-03 13:34:08] 2025-06-03 17:33:53,962 | INFO     | cpuconsumptiontime: 45705 s
[2025-06-03 13:34:08] 2025-06-03 17:33:53,962 | INFO     | nevents: 400
[2025-06-03 13:34:08] 2025-06-03 17:33:53,962 | INFO     | neventsw: 0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,962 | INFO     | pid: 14103
[2025-06-03 13:34:08] 2025-06-03 17:33:53,963 | INFO     | pgrp: 14103
[2025-06-03 13:34:08] 2025-06-03 17:33:53,963 | INFO     | corecount: 8
[2025-06-03 13:34:08] 2025-06-03 17:33:53,963 | INFO     | event service: False
[2025-06-03 13:34:08] 2025-06-03 17:33:53,963 | INFO     | sizes: {0: 2404962, 1: 2405161, 6: 2405367, 11: 2405395, 6103: 2431997, 6104: 2431996, 6105: 2441121, 6106: 2441177, 6112: 2441347}
[2025-06-03 13:34:08] 2025-06-03 17:33:53,963 | INFO     | --------------------------------------------------
[2025-06-03 13:34:08] 2025-06-03 17:33:53,963 | INFO     | 
[2025-06-03 13:34:08] 2025-06-03 17:33:53,964 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 13:34:08] 2025-06-03 17:33:53,991 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,993 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,993 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,993 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,993 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,993 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,993 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,994 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,994 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,994 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,994 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,994 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,995 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,995 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,995 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:34:08] 2025-06-03 17:33:53,996 | INFO     | job 6677621325 has completed (purged errors)
[2025-06-03 13:34:08] 2025-06-03 17:33:53,996 | INFO     | overall cleanup function is called
[2025-06-03 13:34:08] 2025-06-03 17:33:55,004 | INFO     | --- collectZombieJob: --- 10, [14103]
[2025-06-03 13:34:08] 2025-06-03 17:33:55,004 | INFO     | zombie collector waiting for pid 14103
[2025-06-03 13:34:08] 2025-06-03 17:33:55,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:34:08] 2025-06-03 17:33:55,005 | INFO     | collected zombie processes
[2025-06-03 13:34:08] 2025-06-03 17:33:55,005 | INFO     | will attempt to kill all subprocesses of pid=14103
[2025-06-03 13:34:08] 2025-06-03 17:33:55,087 | INFO     | process IDs to be killed: [14103] (in reverse order)
[2025-06-03 13:34:08] 2025-06-03 17:33:55,139 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:34:08] 2025-06-03 17:33:55,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:34:08] 2025-06-03 17:33:55,143 | INFO     | did not find any defunct processes belonging to 14103
[2025-06-03 13:34:08] 2025-06-03 17:33:55,147 | INFO     | did not find any defunct processes belonging to 14103
[2025-06-03 13:34:08] 2025-06-03 17:33:55,148 | INFO     | ready for new job
[2025-06-03 13:34:08] 2025-06-03 17:33:55,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:34:08] 2025-06-03 17:33:55,149 | INFO     | **************************************
[2025-06-03 13:34:08] 2025-06-03 17:33:55,149 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:34:08] 2025-06-03 17:33:55,149 | INFO     | **************************************
[2025-06-03 13:34:08] 2025-06-03 17:33:55,149 | INFO     | 
[2025-06-03 13:34:08] 2025-06-03 17:33:55,150 | INFO     | architecture information:
[2025-06-03 13:34:08] 2025-06-03 17:33:55,150 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:34:08] 2025-06-03 17:33:55,168 | INFO     | cat /etc/os-release:
[2025-06-03 13:34:08] NAME="CentOS Linux"
[2025-06-03 13:34:08] VERSION="7 (Core)"
[2025-06-03 13:34:08] ID="centos"
[2025-06-03 13:34:08] ID_LIKE="rhel fedora"
[2025-06-03 13:34:08] VERSION_ID="7"
[2025-06-03 13:34:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:34:08] ANSI_COLOR="0;31"
[2025-06-03 13:34:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:34:08] HOME_URL="https://www.centos.org/"
[2025-06-03 13:34:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:34:08] 
[2025-06-03 13:34:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:34:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:34:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:34:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:34:08] 
[2025-06-03 13:34:08] 2025-06-03 17:33:55,168 | INFO     | **************************************
[2025-06-03 13:34:08] 2025-06-03 17:33:55,671 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 13:34:08] 2025-06-03 17:33:55,690 | INFO     | sufficient remaining disk space (18639486976 B)
[2025-06-03 13:34:08] 2025-06-03 17:33:55,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:34:08] 2025-06-03 17:33:55,691 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:34:08] 2025-06-03 17:33:55,691 | INFO     | update_server=False
[2025-06-03 13:34:08] 2025-06-03 17:33:55,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:34:08] 2025-06-03 17:33:55,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:34:08] 2025-06-03 17:33:55,802 | INFO     | PID=7572 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 13:34:08] 2025-06-03 17:33:55,802 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:34:08] 2025-06-03 17:33:55,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:34:08] 2025-06-03 17:33:55,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:34:08] 2025-06-03 17:33:55,923 | INFO     | all data control threads have been joined
[2025-06-03 13:34:08] 2025-06-03 17:33:56,150 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:34:08] 2025-06-03 17:33:56,150 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:34:08] 2025-06-03 17:33:56,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:34:08] 2025-06-03 17:33:56,150 | INFO     | will abort loop
[2025-06-03 13:34:08] 2025-06-03 17:33:56,178 | INFO     | all payload control threads have been joined
[2025-06-03 13:34:08] 2025-06-03 17:33:56,697 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:56,697 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:56,880 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:56,928 | INFO     | [data] control thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:56,974 | INFO     | all job control threads have been joined
[2025-06-03 13:34:08] 2025-06-03 17:33:57,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:34:08] 2025-06-03 17:33:57,156 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,156 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,174 | INFO     | [job] validate thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,178 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,183 | INFO     | [payload] control thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,298 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,539 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,669 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,919 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:57,979 | INFO     | [job] control thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:33:58,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:34:08] 2025-06-03 17:33:59,020 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:34:02,158 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:34:08] 2025-06-03 17:34:03,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140361840650048)>', '<ExcThread(monitor, started 140361225705216)>']
[2025-06-03 13:34:08] 2025-06-03 17:34:03,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:34:08] 2025-06-03 17:34:03,844 | INFO     | [monitor] control thread has ended
[2025-06-03 13:34:08] 2025-06-03 17:34:08,602 | INFO     | all workflow threads have been joined
[2025-06-03 13:34:08] 2025-06-03 17:34:08,602 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:34:08] 2025-06-03 17:34:08,604 | INFO     | traces error code: 0
[2025-06-03 13:34:08] 2025-06-03 17:34:08,606 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:34:08] 2025-06-03 17:34:08,718 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:34:08] 2025-06-03 17:34:08,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:34:08] 2025-06-03 17:34:08,727 [wrapper] pilotpid: 7572
[2025-06-03 13:34:08] 2025-06-03 17:34:08,732 [wrapper] Pilot exit status: 0
[2025-06-03 13:34:08] 2025-06-03 17:34:08,749 [wrapper] pandaids: 6677621325
[2025-06-03 13:34:08] 2025-06-03 17:34:08,791 [wrapper] cleanup supervisor_pilot 31750 7573
[2025-06-03 13:34:08] 2025-06-03 17:34:08,796 [wrapper] Test setup, not cleaning
[2025-06-03 13:34:08] 2025-06-03 17:34:08,800 [wrapper] apfmon messages muted
[2025-06-03 13:34:08] 2025-06-03 17:34:08,804 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:34:08] 2025-06-03 17:34:08,809 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:34:08]  *** Error codes and diagnostics ***
[2025-06-03 13:34:08]     "exeErrorCode": 0,
[2025-06-03 13:34:08]     "exeErrorDiag": "",
[2025-06-03 13:34:08]     "pilotErrorCode": 0,
[2025-06-03 13:34:08]     "pilotErrorDiag": "",
[2025-06-03 13:34:08]  *** Listing of results directory ***
[2025-06-03 13:34:08] total 391448
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 09:09 queuedata.json
[2025-06-03 13:34:08] -rwx------ 1 boincer umatlas     37140 Jun  3 09:10 runpilot2-wrapper.sh
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas       100 Jun  3 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:34:08] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 11:51 run_atlas
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas       105 Jun  3 11:51 job.xml
[2025-06-03 13:34:08] -rw-r--r-- 2 boincer umatlas 215364274 Jun  3 11:51 EVNT.45006593._001349.pool.root.1
[2025-06-03 13:34:08] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:51 start_atlas.sh
[2025-06-03 13:34:08] drwxrwx--x 2 boincer umatlas      4096 Jun  3 11:51 shared
[2025-06-03 13:34:08] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 11:51 input.tar.gz
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas         0 Jun  3 11:51 boinc_lockfile
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 11:51 pandaJob.out
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas    983735 Jun  3 11:51 agis_schedconf.cvmfs.json
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas   1603667 Jun  3 11:51 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:34:08] drwx------ 4 boincer umatlas      4096 Jun  3 11:51 pilot3
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 13:30 init_data.xml
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas        95 Jun  3 13:33 pilot_heartbeat.json
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas 179853597 Jun  3 13:33 HITS.45006595._033534.pool.root.1
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 13:33 boinc_mmap_file
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas        27 Jun  3 13:33 wrapper_checkpoint.txt
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas       530 Jun  3 13:33 boinc_task_state.xml
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas      1048 Jun  3 13:33 memory_monitor_summary.json
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas    324504 Jun  3 13:33 log.45006595._033534.job.log.tgz.1
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas      7750 Jun  3 13:33 heartbeat.json
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas      4855 Jun  3 13:34 pilotlog.txt
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas    569757 Jun  3 13:34 log.45006595._033534.job.log.1
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas       357 Jun  3 13:34 output.list
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas       620 Jun  3 13:34 runtime_log
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas    911360 Jun  3 13:34 result.tar.gz
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas       658 Jun  3 13:34 Yn4MDmBagg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoGkKDmIoGTen.diag
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 13:34 runtime_log.err
[2025-06-03 13:34:08] -rw-r--r-- 1 boincer umatlas     21143 Jun  3 13:34 stderr.txt
[2025-06-03 13:34:08] HITS file was successfully produced:
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas 179853597 Jun  3 13:33 shared/HITS.pool.root.1
[2025-06-03 13:34:08]  *** Contents of shared directory: ***
[2025-06-03 13:34:08] total 387372
[2025-06-03 13:34:08] -rw-r--r-- 2 boincer umatlas 215364274 Jun  3 11:51 ATLAS.root_0
[2025-06-03 13:34:08] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:51 start_atlas.sh
[2025-06-03 13:34:08] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 11:51 input.tar.gz
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas 179853597 Jun  3 13:33 HITS.pool.root.1
[2025-06-03 13:34:08] -rw------- 1 boincer umatlas    911360 Jun  3 13:34 result.tar.gz
13:34:10 (3962): run_atlas exited; CPU time 45660.680224
13:34:10 (3962): called boinc_finish(0)

</stderr_txt>
]]>

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