Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:21:28 (947835): wrapper (7.7.26015): starting
16:21:28 (947835): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:21:28] Arguments: --nthreads 4
[2025-06-05 16:21:28] Threads: 4
[2025-06-05 16:21:28] Checking for CVMFS
[2025-06-05 16:21:28] No cvmfs_config command found, will try listing directly
[2025-06-05 16:21:28] CVMFS is ok
[2025-06-05 16:21:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:21:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:21:28] Further information can be found at the LHC@home message board.
[2025-06-05 16:21:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:21:28] Checking for apptainer binary...
[2025-06-05 16:21:28] which: no apptainer in ((null))
[2025-06-05 16:21:28] apptainer is not installed, using version from CVMFS
[2025-06-05 16:21:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:21:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-06-05 16:21:28] apptainer works
[2025-06-05 16:21:28] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:21:28] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:21:28] Starting ATLAS job with PandaID=6677621194
[2025-06-05 16:21:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 19:07:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 19:07:50] 2025-06-05 17:05:08,784 | INFO     | number of running child processes to parent process 958786: 1
[2025-06-05 19:07:50] 2025-06-05 17:05:08,785 | INFO     | maximum number of monitored processes: 6
[2025-06-05 19:07:50] 2025-06-05 17:05:08,820 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 19:07:50] 2025-06-05 17:05:11,288 | INFO     | monitor loop #723: job 0:6677621194 is in state 'finished'
[2025-06-05 19:07:50] 2025-06-05 17:05:11,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:07:50] 2025-06-05 17:05:13,791 | INFO     | monitor loop #724: job 0:6677621194 is in state 'finished'
[2025-06-05 19:07:50] 2025-06-05 17:05:13,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,307 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 19:07:50] 2025-06-05 17:05:14,308 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677621194/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,309 | INFO     | extracted standard info from prmon json
[2025-06-05 19:07:50] 2025-06-05 17:05:14,309 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 19:07:50] 2025-06-05 17:05:14,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 19:07:50] 2025-06-05 17:05:14,310 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 19:07:50] 2025-06-05 17:05:14,310 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 19:07:50] 2025-06-05 17:05:14,314 | INFO     | fitting pss+swap vs Time
[2025-06-05 19:07:50] 2025-06-05 17:05:14,315 | INFO     | sum of square deviations: 1294014960.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,316 | INFO     | sum of deviations: -44847133815.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,316 | INFO     | mean x: 1749138204.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,317 | INFO     | mean y: 2417233.1801242237
[2025-06-05 19:07:50] 2025-06-05 17:05:14,317 | INFO     | -- intersect: 60622918170.6011
[2025-06-05 19:07:50] 2025-06-05 17:05:14,317 | INFO     | intersect: 60622918170.6011
[2025-06-05 19:07:50] 2025-06-05 17:05:14,317 | INFO     | chi2: 2.6309576812565627
[2025-06-05 19:07:50] 2025-06-05 17:05:14,318 | INFO     | sum of square deviations: 1177156955.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,319 | INFO     | sum of deviations: -33395295277.000004
[2025-06-05 19:07:50] 2025-06-05 17:05:14,319 | INFO     | mean x: 1749138051.5
[2025-06-05 19:07:50] 2025-06-05 17:05:14,319 | INFO     | mean y: 2431876.1666666665
[2025-06-05 19:07:50] 2025-06-05 17:05:14,319 | INFO     | -- intersect: 49624516222.66653
[2025-06-05 19:07:50] 2025-06-05 17:05:14,319 | INFO     | intersect: 49624516222.66653
[2025-06-05 19:07:50] 2025-06-05 17:05:14,320 | INFO     | chi2: 1.979089815766116
[2025-06-05 19:07:50] 2025-06-05 17:05:14,320 | INFO     | current chi2=1.979089815766116 (change=24.776828230057664 %)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,320 | INFO     | right removable region: 155
[2025-06-05 19:07:50] 2025-06-05 17:05:14,320 | INFO     | sum of square deviations: 1177156955.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,322 | INFO     | sum of deviations: -69482499387.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,322 | INFO     | mean x: 1749138356.5
[2025-06-05 19:07:50] 2025-06-05 17:05:14,322 | INFO     | mean y: 2448942.3205128205
[2025-06-05 19:07:50] 2025-06-05 17:05:14,322 | INFO     | -- intersect: 103246544189.83102
[2025-06-05 19:07:50] 2025-06-05 17:05:14,322 | INFO     | intersect: 103246544189.83102
[2025-06-05 19:07:50] 2025-06-05 17:05:14,322 | INFO     | chi2: 1.0102336970297605
[2025-06-05 19:07:50] 2025-06-05 17:05:14,323 | INFO     | current chi2=1.0102336970297605 (change=61.60205448278947 %)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,323 | INFO     | sum of square deviations: 1067554900.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,324 | INFO     | sum of deviations: -64151492959.00001
[2025-06-05 19:07:50] 2025-06-05 17:05:14,324 | INFO     | mean x: 1749138509.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,324 | INFO     | mean y: 2441493.132450331
[2025-06-05 19:07:50] 2025-06-05 17:05:14,324 | INFO     | -- intersect: 105111646410.30276
[2025-06-05 19:07:50] 2025-06-05 17:05:14,325 | INFO     | intersect: 105111646410.30276
[2025-06-05 19:07:50] 2025-06-05 17:05:14,325 | INFO     | chi2: 1.0082166404964843
[2025-06-05 19:07:50] 2025-06-05 17:05:14,325 | INFO     | current chi2=1.0082166404964843 (change=0.19966236913366367 %)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,325 | INFO     | left removable region: 20
[2025-06-05 19:07:50] 2025-06-05 17:05:14,326 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,327 | INFO     | sum of deviations: -40334454160.00002
[2025-06-05 19:07:50] 2025-06-05 17:05:14,327 | INFO     | mean x: 1749138631.0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,327 | INFO     | mean y: 2438623.703703704
[2025-06-05 19:07:50] 2025-06-05 17:05:14,327 | INFO     | -- intersect: 92481734934.4558
[2025-06-05 19:07:50] 2025-06-05 17:05:14,327 | INFO     | intersect: 92481734934.4558
[2025-06-05 19:07:50] 2025-06-05 17:05:14,328 | INFO     | chi2: 0.3132641188152915
[2025-06-05 19:07:50] 2025-06-05 17:05:14,328 | INFO     | -- intersect: 92481734934.4558
[2025-06-05 19:07:50] 2025-06-05 17:05:14,328 | INFO     | current memory leak: -52.87 B/s (using 135 data points, chi2=0.31)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | ..............................
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . Timing measurements:
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . get job = 0 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . initial setup = 1 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . payload setup = 6 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . stage-in = 0 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . payload execution = 9780 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,329 | INFO     | . stage-out = 0 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,330 | INFO     | . log creation = 0 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,330 | INFO     | ..............................
[2025-06-05 19:07:50] 2025-06-05 17:05:14,872 | INFO     | 
[2025-06-05 19:07:50] 2025-06-05 17:05:14,872 | INFO     | job summary report
[2025-06-05 19:07:50] 2025-06-05 17:05:14,872 | INFO     | --------------------------------------------------
[2025-06-05 19:07:50] 2025-06-05 17:05:14,872 | INFO     | PanDA job id: 6677621194
[2025-06-05 19:07:50] 2025-06-05 17:05:14,872 | INFO     | task id: 45006595
[2025-06-05 19:07:50] 2025-06-05 17:05:14,872 | INFO     | errors: (none)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | pilot state: finished 
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | transexitcode: 0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | exeerrorcode: 0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | exeerrordiag: 
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | exitcode: 0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | exitmsg: OK
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | cpuconsumptiontime: 37289 s
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | nevents: 400
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | neventsw: 0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,873 | INFO     | pid: 958786
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | pgrp: 958786
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | corecount: 4
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | event service: False
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | sizes: {0: 2397353, 4: 2397559, 11: 2397587, 9790: 2425990, 9791: 2425989, 9792: 2435008, 9794: 2435192, 9801: 2435362}
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | --------------------------------------------------
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | 
[2025-06-05 19:07:50] 2025-06-05 17:05:14,874 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-05 19:07:50] 2025-06-05 17:05:14,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,893 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,893 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,896 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 19:07:50] 2025-06-05 17:05:14,896 | INFO     | job 6677621194 has completed (purged errors)
[2025-06-05 19:07:50] 2025-06-05 17:05:14,896 | INFO     | overall cleanup function is called
[2025-06-05 19:07:50] 2025-06-05 17:05:15,904 | INFO     | --- collectZombieJob: --- 10, [958786]
[2025-06-05 19:07:50] 2025-06-05 17:05:15,904 | INFO     | zombie collector waiting for pid 958786
[2025-06-05 19:07:50] 2025-06-05 17:05:15,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 19:07:50] 2025-06-05 17:05:15,904 | INFO     | collected zombie processes
[2025-06-05 19:07:50] 2025-06-05 17:05:15,904 | INFO     | will attempt to kill all subprocesses of pid=958786
[2025-06-05 19:07:50] 2025-06-05 17:05:16,215 | INFO     | process IDs to be killed: [958786] (in reverse order)
[2025-06-05 19:07:50] 2025-06-05 17:05:16,294 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 19:07:50] 2025-06-05 17:05:16,295 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 19:07:50] 2025-06-05 17:05:16,303 | INFO     | did not find any defunct processes belonging to 958786
[2025-06-05 19:07:50] 2025-06-05 17:05:16,311 | INFO     | did not find any defunct processes belonging to 958786
[2025-06-05 19:07:50] 2025-06-05 17:05:16,312 | INFO     | ready for new job
[2025-06-05 19:07:50] 2025-06-05 17:05:16,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 19:07:50] 2025-06-05 17:05:16,314 | INFO     | **************************************
[2025-06-05 19:07:50] 2025-06-05 17:05:16,314 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 19:07:50] 2025-06-05 17:05:16,314 | INFO     | **************************************
[2025-06-05 19:07:50] 2025-06-05 17:05:16,314 | INFO     | 
[2025-06-05 19:07:50] 2025-06-05 17:05:16,317 | INFO     | architecture information:
[2025-06-05 19:07:50] 2025-06-05 17:05:16,317 | INFO     | executing command: cat /etc/os-release
[2025-06-05 19:07:50] 2025-06-05 17:05:16,331 | INFO     | cat /etc/os-release:
[2025-06-05 19:07:50] NAME="CentOS Linux"
[2025-06-05 19:07:50] VERSION="7 (Core)"
[2025-06-05 19:07:50] ID="centos"
[2025-06-05 19:07:50] ID_LIKE="rhel fedora"
[2025-06-05 19:07:50] VERSION_ID="7"
[2025-06-05 19:07:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 19:07:50] ANSI_COLOR="0;31"
[2025-06-05 19:07:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 19:07:50] HOME_URL="https://www.centos.org/"
[2025-06-05 19:07:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 19:07:50] 
[2025-06-05 19:07:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 19:07:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 19:07:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 19:07:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 19:07:50] 
[2025-06-05 19:07:50] 2025-06-05 17:05:16,331 | INFO     | **************************************
[2025-06-05 19:07:50] 2025-06-05 17:05:16,834 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-05 19:07:50] 2025-06-05 17:05:16,849 | INFO     | sufficient remaining disk space (1653499494400 B)
[2025-06-05 19:07:50] 2025-06-05 17:05:16,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 19:07:50] 2025-06-05 17:05:16,849 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 19:07:50] 2025-06-05 17:05:16,849 | INFO     | update_server=False
[2025-06-05 19:07:50] 2025-06-05 17:05:16,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 19:07:50] 2025-06-05 17:05:16,850 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 19:07:50] 2025-06-05 17:05:16,850 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 19:07:50] 2025-06-05 17:05:16,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 19:07:50] 2025-06-05 17:05:16,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 19:07:50] 2025-06-05 17:05:17,226 | INFO     | all job control threads have been joined
[2025-06-05 19:07:50] 2025-06-05 17:05:17,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:07:50] 2025-06-05 17:05:17,300 | INFO     | aborting loop
[2025-06-05 19:07:50] 2025-06-05 17:05:17,518 | INFO     | all data control threads have been joined
[2025-06-05 19:07:50] 2025-06-05 17:05:17,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 19:07:50] 2025-06-05 17:05:17,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 19:07:50] 2025-06-05 17:05:17,855 | INFO     | [job] retrieve thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:17,976 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,232 | INFO     | [job] control thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,275 | INFO     | all payload control threads have been joined
[2025-06-05 19:07:50] 2025-06-05 17:05:18,305 | INFO     | [job] job monitor thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,362 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,417 | INFO     | [payload] failed_post thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,524 | INFO     | [data] control thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:18,899 | INFO     | [data] copytool_in thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:19,074 | INFO     | [job] validate thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:19,142 | INFO     | [payload] validate_post thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:19,267 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:19,280 | INFO     | [payload] control thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:19,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 19:07:50] 2025-06-05 17:05:19,839 | INFO     | [data] copytool_out thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:20,478 | INFO     | [job] queue monitor thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:21,820 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 19:07:50] 2025-06-05 17:05:23,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22524967696192)>', '<ExcThread(monitor, started 22524729456384)>']
[2025-06-05 19:07:50] 2025-06-05 17:05:23,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 19:07:50] 2025-06-05 17:05:23,883 | INFO     | [monitor] control thread has ended
[2025-06-05 19:07:50] 2025-06-05 17:05:28,036 | INFO     | all workflow threads have been joined
[2025-06-05 19:07:50] 2025-06-05 17:05:28,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 19:07:50] 2025-06-05 17:05:28,036 | INFO     | traces error code: 0
[2025-06-05 19:07:50] 2025-06-05 17:05:28,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 19:07:50] 2025-06-05 17:05:28,161 [wrapper] ==== pilot stdout END ====
[2025-06-05 19:07:50] 2025-06-05 17:05:28,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 19:07:50] 2025-06-05 17:05:28,166 [wrapper] pilotpid: 951428
[2025-06-05 19:07:50] 2025-06-05 17:05:28,168 [wrapper] Pilot exit status: 0
[2025-06-05 19:07:50] 2025-06-05 17:05:28,177 [wrapper] pandaids: 6677621194
[2025-06-05 19:07:50] 2025-06-05 17:05:28,225 [wrapper] cleanup supervisor_pilot 1095631 951429
[2025-06-05 19:07:50] 2025-06-05 17:05:28,228 [wrapper] Test setup, not cleaning
[2025-06-05 19:07:50] 2025-06-05 17:05:28,230 [wrapper] apfmon messages muted
[2025-06-05 19:07:50] 2025-06-05 17:05:28,233 [wrapper] ==== wrapper stdout END ====
[2025-06-05 19:07:50] 2025-06-05 17:05:28,235 [wrapper] ==== wrapper stderr END ====
[2025-06-05 19:07:50]  *** Error codes and diagnostics ***
[2025-06-05 19:07:50]     "exeErrorCode": 0,
[2025-06-05 19:07:50]     "exeErrorDiag": "",
[2025-06-05 19:07:50]     "pilotErrorCode": 0,
[2025-06-05 19:07:50]     "pilotErrorDiag": "",
[2025-06-05 19:07:50]  *** Listing of results directory ***
[2025-06-05 19:07:50] total 394336
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:09 queuedata.json
[2025-06-05 19:07:50] -rwx------ 1 boinc boinc     37140 Jun  3 15:10 runpilot2-wrapper.sh
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc       100 Jun  5 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 19:07:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 16:21 run_atlas
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc       105 Jun  5 16:21 job.xml
[2025-06-05 19:07:50] -rw-r--r-- 2 boinc boinc 216600500 Jun  5 16:21 EVNT.45006593._001344.pool.root.1
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc      6419 Jun  5 16:21 init_data.xml
[2025-06-05 19:07:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:21 start_atlas.sh
[2025-06-05 19:07:50] drwxrwx--x 2 boinc boinc      4096 Jun  5 16:21 shared
[2025-06-05 19:07:50] -rw-r--r-- 2 boinc boinc    508875 Jun  5 16:21 input.tar.gz
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc         0 Jun  5 16:21 boinc_lockfile
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc      2525 Jun  5 16:21 pandaJob.out
[2025-06-05 19:07:50] -rw------- 1 boinc boinc    983210 Jun  5 16:21 agis_schedconf.cvmfs.json
[2025-06-05 19:07:50] -rw------- 1 boinc boinc   1598969 Jun  5 16:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 19:07:50] drwx------ 4 boinc boinc      4096 Jun  5 16:21 pilot3
[2025-06-05 19:07:50] -rw------- 1 boinc boinc 180926909 Jun  5 19:04 HITS.45006595._033403.pool.root.1
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc       528 Jun  5 19:04 boinc_task_state.xml
[2025-06-05 19:07:50] -rw------- 1 boinc boinc        95 Jun  5 19:04 pilot_heartbeat.json
[2025-06-05 19:07:50] -rw------- 1 boinc boinc      1036 Jun  5 19:05 memory_monitor_summary.json
[2025-06-05 19:07:50] -rw------- 1 boinc boinc    295200 Jun  5 19:05 log.45006595._033403.job.log.tgz.1
[2025-06-05 19:07:50] -rw------- 1 boinc boinc      7728 Jun  5 19:05 heartbeat.json
[2025-06-05 19:07:50] -rw------- 1 boinc boinc      4487 Jun  5 19:05 pilotlog.txt
[2025-06-05 19:07:50] -rw------- 1 boinc boinc    927853 Jun  5 19:05 log.45006595._033403.job.log.1
[2025-06-05 19:07:50] -rw------- 1 boinc boinc       357 Jun  5 19:05 output.list
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc       620 Jun  5 19:05 runtime_log
[2025-06-05 19:07:50] -rw------- 1 boinc boinc   1239040 Jun  5 19:05 result.tar.gz
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc      9025 Jun  5 19:05 runtime_log.err
[2025-06-05 19:07:50] -rw------- 1 boinc boinc       662 Jun  5 19:05 GufLDmeagg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnHkKDmghMdbm.diag
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc        27 Jun  5 19:07 wrapper_checkpoint.txt
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc      8192 Jun  5 19:07 boinc_mmap_file
[2025-06-05 19:07:50] -rw-r--r-- 1 boinc boinc     20944 Jun  5 19:07 stderr.txt
[2025-06-05 19:07:50] HITS file was successfully produced:
[2025-06-05 19:07:50] -rw------- 1 boinc boinc 180926909 Jun  5 19:04 shared/HITS.pool.root.1
[2025-06-05 19:07:50]  *** Contents of shared directory: ***
[2025-06-05 19:07:50] total 389944
[2025-06-05 19:07:50] -rw-r--r-- 2 boinc boinc 216600500 Jun  5 16:21 ATLAS.root_0
[2025-06-05 19:07:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:21 start_atlas.sh
[2025-06-05 19:07:50] -rw-r--r-- 2 boinc boinc    508875 Jun  5 16:21 input.tar.gz
[2025-06-05 19:07:50] -rw------- 1 boinc boinc 180926909 Jun  5 19:04 HITS.pool.root.1
[2025-06-05 19:07:50] -rw------- 1 boinc boinc   1239040 Jun  5 19:05 result.tar.gz
19:07:52 (947835): run_atlas exited; CPU time 37639.584684
19:07:52 (947835): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN