Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:48:34 (490552): wrapper (7.7.26015): starting
11:48:34 (490552): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:48:34] Arguments: --nthreads 8
[2025-06-03 11:48:34] Threads: 8
[2025-06-03 11:48:34] Checking for CVMFS
[2025-06-03 11:48:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:48:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:48:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:48:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:48:35] 2.12.6.0 7995 98 54472 146748 1 186 21091296 32935937 5306 16776704 0 1073870 99.982 151130 52732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:48:35] CVMFS is ok
[2025-06-03 11:48:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:48:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:48:35] Further information can be found at the LHC@home message board.
[2025-06-03 11:48:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:48:35] Checking for apptainer binary...
[2025-06-03 11:48:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:48:35] Running /usr/bin/apptainer --version
[2025-06-03 11:48:35] apptainer version 1.4.1-1.el9
[2025-06-03 11:48:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:48:35] c6-8-25-2.aglt2.org
[2025-06-03 11:48:35] apptainer works
[2025-06-03 11:48:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:48:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:48:35] Starting ATLAS job with PandaID=6677599789
[2025-06-03 11:48:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:11:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:11:44]  guid=340e4a5c-fc5f-42bd-8273-3241e5fe354f
[2025-06-03 13:11:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 13:11:44]  is_altstaged=None
[2025-06-03 13:11:44]  is_tar=False
[2025-06-03 13:11:44]  lfn=log.45006595._030875.job.log.tgz.1
[2025-06-03 13:11:44]  mtime=0
[2025-06-03 13:11:44]  protocol_id=None
[2025-06-03 13:11:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:11:44]  replicas=None
[2025-06-03 13:11:44]  scope=mc23_13p6TeV
[2025-06-03 13:11:44]  status=None
[2025-06-03 13:11:44]  status_code=0
[2025-06-03 13:11:44]  storage_token=
[2025-06-03 13:11:44]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6677599789/log.45006595._030875.job.log.tgz.1
[2025-06-03 13:11:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/1d/log.45006595._030875.job.log.tgz.1
[2025-06-03 13:11:44]  workdir=None
[2025-06-03 13:11:44] ]
[2025-06-03 13:11:44] 2025-06-03 17:11:18,633 | INFO     | transferring file log.45006595._030875.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6677599789/log.45006595._030875.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:11:44] 2025-06-03 17:11:18,634 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6677599789/log.45006595._030875.job.log.tgz.1 /tmp/boinchome/slots/8/log.45006595._030875.job
[2025-06-03 13:11:44] 2025-06-03 17:11:18,650 | INFO     | adding to output.list: log.45006595._030875.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/1d/log.45006595._030875.job.log.tg
[2025-06-03 13:11:44] 2025-06-03 17:11:18,651 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:11:44] 2025-06-03 17:11:18,651 | INFO     | summary of transferred files:
[2025-06-03 13:11:44] 2025-06-03 17:11:18,651 | INFO     |  -- lfn=log.45006595._030875.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:11:44] 2025-06-03 17:11:18,652 | INFO     | stage-out finished correctly
[2025-06-03 13:11:44] 2025-06-03 17:11:19,057 | WARNING  | process 516968 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 13:11:44] 2025-06-03 17:11:19,057 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6677599789/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:11:44] 2025-06-03 17:11:19,374 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:11:44] 2025-06-03 17:11:19,464 | INFO     | number of running child processes to parent process 516968: 1
[2025-06-03 13:11:44] 2025-06-03 17:11:19,465 | INFO     | maximum number of monitored processes: 6
[2025-06-03 13:11:44] 2025-06-03 17:11:20,889 | INFO     | job 6677599789 has state=finished
[2025-06-03 13:11:44] 2025-06-03 17:11:20,889 | INFO     | preparing for final server update for job 6677599789 in state='finished'
[2025-06-03 13:11:44] 2025-06-03 17:11:20,890 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:11:44] 2025-06-03 17:11:20,890 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:11:44] 2025-06-03 17:11:20,890 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:11:44] 2025-06-03 17:11:20,890 | INFO     | job 6677599789 has finished - writing final server update
[2025-06-03 13:11:44] 2025-06-03 17:11:20,890 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:11:44] 2025-06-03 17:11:20,907 | INFO     | executing command: lscpu
[2025-06-03 13:11:44] 2025-06-03 17:11:20,982 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:11:44] 2025-06-03 17:11:21,968 | INFO     | monitor loop #349: job 0:6677599789 is in state 'finished'
[2025-06-03 13:11:44] 2025-06-03 17:11:21,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:11:44] 2025-06-03 17:11:23,549 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:11:44] 2025-06-03 17:11:23,550 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6677599789/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:11:44] 2025-06-03 17:11:23,550 | INFO     | extracted standard info from prmon json
[2025-06-03 13:11:44] 2025-06-03 17:11:23,551 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:11:44] 2025-06-03 17:11:23,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:11:44] 2025-06-03 17:11:23,551 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:11:44] 2025-06-03 17:11:23,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:11:44] 2025-06-03 17:11:23,553 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:11:44] 2025-06-03 17:11:23,553 | INFO     | sum of square deviations: 125630262.5
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | sum of deviations: 8519087492.0
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | mean x: 1748968270.5
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | mean y: 2140476.189189189
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | -- intersect: -118596781635.60233
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | intersect: -118596781635.60233
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | chi2: 0.8309053654685454
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | -- intersect: -118596781635.60233
[2025-06-03 13:11:44] 2025-06-03 17:11:23,554 | INFO     | current memory leak: 67.81 B/s (using 74 data points, chi2=0.83)
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | ..............................
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . Timing measurements:
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . get job = 0 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . initial setup = 2 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . payload setup = 2 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . stage-in = 0 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . payload execution = 4937 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . stage-out = 0 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | . log creation = 0 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,555 | INFO     | ..............................
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | 
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | job summary report
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | --------------------------------------------------
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | PanDA job id: 6677599789
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | task id: 45006595
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | errors: (none)
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | pilot state: finished 
[2025-06-03 13:11:44] 2025-06-03 17:11:23,646 | INFO     | transexitcode: 0
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | exeerrorcode: 0
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | exeerrordiag: 
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | exitcode: 0
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | exitmsg: OK
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | cpuconsumptiontime: 34025 s
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | nevents: 400
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | neventsw: 0
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | pid: 516968
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | pgrp: 516968
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | corecount: 8
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | event service: False
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | sizes: {0: 2405184, 2: 2405390, 11: 2405418, 4944: 2431853, 4945: 2440794, 4946: 2440850, 4950: 2441148}
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | --------------------------------------------------
[2025-06-03 13:11:44] 2025-06-03 17:11:23,647 | INFO     | 
[2025-06-03 13:11:44] 2025-06-03 17:11:23,648 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:11:44] 2025-06-03 17:11:23,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:11:44] 2025-06-03 17:11:23,666 | INFO     | job 6677599789 has completed (purged errors)
[2025-06-03 13:11:44] 2025-06-03 17:11:23,666 | INFO     | overall cleanup function is called
[2025-06-03 13:11:44] 2025-06-03 17:11:24,673 | INFO     | --- collectZombieJob: --- 10, [516968]
[2025-06-03 13:11:44] 2025-06-03 17:11:24,674 | INFO     | zombie collector waiting for pid 516968
[2025-06-03 13:11:44] 2025-06-03 17:11:24,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:11:44] 2025-06-03 17:11:24,674 | INFO     | collected zombie processes
[2025-06-03 13:11:44] 2025-06-03 17:11:24,674 | INFO     | will attempt to kill all subprocesses of pid=516968
[2025-06-03 13:11:44] 2025-06-03 17:11:24,999 | INFO     | process IDs to be killed: [516968] (in reverse order)
[2025-06-03 13:11:44] 2025-06-03 17:11:25,087 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:11:44] 2025-06-03 17:11:25,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:11:44] 2025-06-03 17:11:25,098 | INFO     | did not find any defunct processes belonging to 516968
[2025-06-03 13:11:44] 2025-06-03 17:11:25,108 | INFO     | did not find any defunct processes belonging to 516968
[2025-06-03 13:11:44] 2025-06-03 17:11:25,108 | INFO     | ready for new job
[2025-06-03 13:11:44] 2025-06-03 17:11:25,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:11:44] 2025-06-03 17:11:25,110 | INFO     | **************************************
[2025-06-03 13:11:44] 2025-06-03 17:11:25,110 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:11:44] 2025-06-03 17:11:25,110 | INFO     | **************************************
[2025-06-03 13:11:44] 2025-06-03 17:11:25,110 | INFO     | 
[2025-06-03 13:11:44] 2025-06-03 17:11:25,126 | INFO     | architecture information:
[2025-06-03 13:11:44] 2025-06-03 17:11:25,127 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:11:44] 2025-06-03 17:11:25,137 | INFO     | cat /etc/os-release:
[2025-06-03 13:11:44] NAME="CentOS Linux"
[2025-06-03 13:11:44] VERSION="7 (Core)"
[2025-06-03 13:11:44] ID="centos"
[2025-06-03 13:11:44] ID_LIKE="rhel fedora"
[2025-06-03 13:11:44] VERSION_ID="7"
[2025-06-03 13:11:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:11:44] ANSI_COLOR="0;31"
[2025-06-03 13:11:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:11:44] HOME_URL="https://www.centos.org/"
[2025-06-03 13:11:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:11:44] 
[2025-06-03 13:11:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:11:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:11:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:11:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:11:44] 
[2025-06-03 13:11:44] 2025-06-03 17:11:25,137 | INFO     | **************************************
[2025-06-03 13:11:44] 2025-06-03 17:11:25,640 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-06-03 13:11:44] 2025-06-03 17:11:25,653 | INFO     | sufficient remaining disk space (70065848320 B)
[2025-06-03 13:11:44] 2025-06-03 17:11:25,653 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:11:44] 2025-06-03 17:11:25,654 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:11:44] 2025-06-03 17:11:25,654 | INFO     | update_server=False
[2025-06-03 13:11:44] 2025-06-03 17:11:25,654 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:11:44] 2025-06-03 17:11:25,654 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:11:44] 2025-06-03 17:11:25,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:11:44] 2025-06-03 17:11:25,654 | INFO     | aborting loop
[2025-06-03 13:11:44] 2025-06-03 17:11:25,750 | INFO     | all data control threads have been joined
[2025-06-03 13:11:44] 2025-06-03 17:11:25,794 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:11:44] 2025-06-03 17:11:25,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:11:44] 2025-06-03 17:11:25,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:11:44] 2025-06-03 17:11:25,850 | INFO     | all payload control threads have been joined
[2025-06-03 13:11:44] 2025-06-03 17:11:25,949 | INFO     | all job control threads have been joined
[2025-06-03 13:11:44] 2025-06-03 17:11:26,659 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:26,660 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:26,702 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:26,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:11:44] 2025-06-03 17:11:26,756 | INFO     | [data] control thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:26,856 | INFO     | [payload] control thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:26,955 | INFO     | [job] control thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:27,311 | INFO     | [job] validate thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:27,416 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:27,542 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:27,594 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:28,098 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:28,134 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:28,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:11:44] 2025-06-03 17:11:28,752 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:29,658 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:29,660 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:36,565 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:11:44] 2025-06-03 17:11:37,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:11:44] 2025-06-03 17:11:38,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981714122560)>', '<ExcThread(monitor, started 139981104346880)>']
[2025-06-03 13:11:44] 2025-06-03 17:11:39,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:11:44] 2025-06-03 17:11:39,862 | INFO     | [monitor] control thread has ended
[2025-06-03 13:11:44] 2025-06-03 17:11:44,000 | INFO     | all workflow threads have been joined
[2025-06-03 13:11:44] 2025-06-03 17:11:44,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:11:44] 2025-06-03 17:11:44,000 | INFO     | traces error code: 0
[2025-06-03 13:11:44] 2025-06-03 17:11:44,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:11:44] 2025-06-03 17:11:44,122 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:11:44] 2025-06-03 17:11:44,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:11:44] 2025-06-03 17:11:44,125 [wrapper] pilotpid: 494335
[2025-06-03 13:11:44] 2025-06-03 17:11:44,127 [wrapper] Pilot exit status: 0
[2025-06-03 13:11:44] 2025-06-03 17:11:44,133 [wrapper] pandaids: 6677599789
[2025-06-03 13:11:44] 2025-06-03 17:11:44,171 [wrapper] cleanup supervisor_pilot  745864 494336
[2025-06-03 13:11:44] 2025-06-03 17:11:44,173 [wrapper] Test setup, not cleaning
[2025-06-03 13:11:44] 2025-06-03 17:11:44,174 [wrapper] apfmon messages muted
[2025-06-03 13:11:44] 2025-06-03 17:11:44,175 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:11:44] 2025-06-03 17:11:44,177 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:11:44]  *** Error codes and diagnostics ***
[2025-06-03 13:11:44]     "exeErrorCode": 0,
[2025-06-03 13:11:44]     "exeErrorDiag": "",
[2025-06-03 13:11:44]     "pilotErrorCode": 0,
[2025-06-03 13:11:44]     "pilotErrorDiag": "",
[2025-06-03 13:11:44]  *** Listing of results directory ***
[2025-06-03 13:11:44] total 388452
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:57 pilot3.tar.gz
[2025-06-03 13:11:44] -rwx------. 1 boincer umatlas     37140 Jun  3 07:36 runpilot2-wrapper.sh
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:36 queuedata.json
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:11:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:48 run_atlas
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:48 job.xml
[2025-06-03 13:11:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:48 start_atlas.sh
[2025-06-03 13:11:44] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:48 shared
[2025-06-03 13:11:44] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 11:48 input.tar.gz
[2025-06-03 13:11:44] -rw-r--r--. 2 boincer umatlas 216194204 Jun  3 11:48 EVNT.45006593._001237.pool.root.1
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:48 boinc_lockfile
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:48 pandaJob.out
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas    983735 Jun  3 11:48 agis_schedconf.cvmfs.json
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:48 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:11:44] drwx------. 4 boincer umatlas      4096 Jun  3 11:48 pilot3
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas      6854 Jun  3 13:02 init_data.xml
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas 176161671 Jun  3 13:10 HITS.45006595._030875.pool.root.1
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:10 boinc_task_state.xml
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas        95 Jun  3 13:11 pilot_heartbeat.json
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas      1033 Jun  3 13:11 memory_monitor_summary.json
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas    314476 Jun  3 13:11 log.45006595._030875.job.log.tgz.1
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas      7714 Jun  3 13:11 heartbeat.json
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:11 wrapper_checkpoint.txt
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:11 boinc_mmap_file
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas      4425 Jun  3 13:11 pilotlog.txt
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas    477751 Jun  3 13:11 log.45006595._030875.job.log.1
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas       357 Jun  3 13:11 output.list
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:11 runtime_log
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas    808960 Jun  3 13:11 result.tar.gz
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas       652 Jun  3 13:11 XQGODmS7eg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdpjKDmIqAhmn.diag
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 13:11 runtime_log.err
[2025-06-03 13:11:44] -rw-r--r--. 1 boincer umatlas     21265 Jun  3 13:11 stderr.txt
[2025-06-03 13:11:44] HITS file was successfully produced:
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas 176161671 Jun  3 13:10 shared/HITS.pool.root.1
[2025-06-03 13:11:44]  *** Contents of shared directory: ***
[2025-06-03 13:11:44] total 384480
[2025-06-03 13:11:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:48 start_atlas.sh
[2025-06-03 13:11:44] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 11:48 input.tar.gz
[2025-06-03 13:11:44] -rw-r--r--. 2 boincer umatlas 216194204 Jun  3 11:48 ATLAS.root_0
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas 176161671 Jun  3 13:10 HITS.pool.root.1
[2025-06-03 13:11:44] -rw-------. 1 boincer umatlas    808960 Jun  3 13:11 result.tar.gz
13:11:45 (490552): run_atlas exited; CPU time 34220.900127
13:11:45 (490552): called boinc_finish(0)

</stderr_txt>
]]>

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