Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:42:42 (501140): wrapper (7.7.26015): starting
11:42:42 (501140): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:42:42] Arguments: --nthreads 8
[2025-06-03 11:42:42] Threads: 8
[2025-06-03 11:42:42] Checking for CVMFS
[2025-06-03 11:42:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:42:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:42:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:42:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:42:42] 2.12.6.0 3733875 171277 398524 146748 2 187 23519882 32935937 3646 130560 1 380554399 99.638 384264921 25463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:42:42] CVMFS is ok
[2025-06-03 11:42:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:42:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:42:42] Further information can be found at the LHC@home message board.
[2025-06-03 11:42:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:42:42] Checking for apptainer binary...
[2025-06-03 11:42:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:42:42] Running /usr/bin/apptainer --version
[2025-06-03 11:42:42] apptainer version 1.4.1-1.el9
[2025-06-03 11:42:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:42:43] c-6-2.aglt2.org
[2025-06-03 11:42:43] apptainer works
[2025-06-03 11:42:43] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:42:43] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:42:43] Starting ATLAS job with PandaID=6677620790
[2025-06-03 11:42:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:16:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:16:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 13:16:29]  is_altstaged=None
[2025-06-03 13:16:29]  is_tar=False
[2025-06-03 13:16:29]  lfn=log.45006595._033084.job.log.tgz.1
[2025-06-03 13:16:29]  mtime=0
[2025-06-03 13:16:29]  protocol_id=None
[2025-06-03 13:16:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:16:29]  replicas=None
[2025-06-03 13:16:29]  scope=mc23_13p6TeV
[2025-06-03 13:16:29]  status=None
[2025-06-03 13:16:29]  status_code=0
[2025-06-03 13:16:29]  storage_token=
[2025-06-03 13:16:29]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677620790/log.45006595._033084.job.log.tgz.1
[2025-06-03 13:16:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/71/log.45006595._033084.job.log.tgz.1
[2025-06-03 13:16:29]  workdir=None
[2025-06-03 13:16:29] ]
[2025-06-03 13:16:29] 2025-06-03 17:16:03,836 | INFO     | transferring file log.45006595._033084.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677620790/log.45006595._033084.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 13:16:29] 2025-06-03 17:16:03,836 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677620790/log.45006595._033084.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._033084.job
[2025-06-03 13:16:29] 2025-06-03 17:16:03,848 | INFO     | adding to output.list: log.45006595._033084.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/71/log.45006595._033084.job.log.tg
[2025-06-03 13:16:29] 2025-06-03 17:16:03,848 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:16:29] 2025-06-03 17:16:03,849 | INFO     | summary of transferred files:
[2025-06-03 13:16:29] 2025-06-03 17:16:03,849 | INFO     |  -- lfn=log.45006595._033084.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:16:29] 2025-06-03 17:16:03,849 | INFO     | stage-out finished correctly
[2025-06-03 13:16:29] 2025-06-03 17:16:05,390 | INFO     | monitor loop #413: job 0:6677620790 is in state 'finished'
[2025-06-03 13:16:29] 2025-06-03 17:16:05,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:16:29] 2025-06-03 17:16:05,897 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:16:29] 2025-06-03 17:16:05,966 | INFO     | job 6677620790 has state=finished
[2025-06-03 13:16:29] 2025-06-03 17:16:05,967 | INFO     | preparing for final server update for job 6677620790 in state='finished'
[2025-06-03 13:16:29] 2025-06-03 17:16:05,967 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:16:29] 2025-06-03 17:16:05,967 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:16:29] 2025-06-03 17:16:05,968 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:16:29] 2025-06-03 17:16:05,968 | INFO     | job 6677620790 has finished - writing final server update
[2025-06-03 13:16:29] 2025-06-03 17:16:05,968 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:16:29] 2025-06-03 17:16:05,983 | INFO     | executing command: lscpu
[2025-06-03 13:16:29] 2025-06-03 17:16:06,047 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:16:29] 2025-06-03 17:16:06,101 | INFO     | PID=504813 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 13:16:29] 2025-06-03 17:16:06,101 | INFO     | .. there are 5 such processes running
[2025-06-03 13:16:29] 2025-06-03 17:16:07,894 | INFO     | monitor loop #414: job 0:6677620790 is in state 'finished'
[2025-06-03 13:16:29] 2025-06-03 17:16:07,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:16:29] 2025-06-03 17:16:08,692 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:16:29] 2025-06-03 17:16:08,692 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677620790/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:16:29] 2025-06-03 17:16:08,693 | INFO     | extracted standard info from prmon json
[2025-06-03 13:16:29] 2025-06-03 17:16:08,693 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:16:29] 2025-06-03 17:16:08,693 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:16:29] 2025-06-03 17:16:08,693 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:16:29] 2025-06-03 17:16:08,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:16:29] 2025-06-03 17:16:08,696 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:16:29] 2025-06-03 17:16:08,696 | INFO     | sum of square deviations: 190403570.0
[2025-06-03 13:16:29] 2025-06-03 17:16:08,697 | INFO     | sum of deviations: 12358400347.000002
[2025-06-03 13:16:29] 2025-06-03 17:16:08,697 | INFO     | mean x: 1748968264.0
[2025-06-03 13:16:29] 2025-06-03 17:16:08,697 | INFO     | mean y: 2132468.564705882
[2025-06-03 13:16:29] 2025-06-03 17:16:08,697 | INFO     | -- intersect: -113517010059.64308
[2025-06-03 13:16:29] 2025-06-03 17:16:08,697 | INFO     | intersect: -113517010059.64308
[2025-06-03 13:16:29] 2025-06-03 17:16:08,697 | INFO     | chi2: 1.1689878810892316
[2025-06-03 13:16:29] 2025-06-03 17:16:08,698 | INFO     | -- intersect: -113517010059.64308
[2025-06-03 13:16:29] 2025-06-03 17:16:08,698 | INFO     | current memory leak: 64.91 B/s (using 85 data points, chi2=1.17)
[2025-06-03 13:16:29] 2025-06-03 17:16:08,698 | INFO     | ..............................
[2025-06-03 13:16:29] 2025-06-03 17:16:08,698 | INFO     | . Timing measurements:
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . get job = 0 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . initial setup = 2 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . payload setup = 6 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . stage-in = 0 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . payload execution = 5567 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . stage-out = 0 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | . log creation = 0 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,699 | INFO     | ..............................
[2025-06-03 13:16:29] 2025-06-03 17:16:08,767 | INFO     | 
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | job summary report
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | --------------------------------------------------
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | PanDA job id: 6677620790
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | task id: 45006595
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | errors: (none)
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | pilot state: finished 
[2025-06-03 13:16:29] 2025-06-03 17:16:08,768 | INFO     | transexitcode: 0
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | exeerrorcode: 0
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | exeerrordiag: 
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | exitcode: 0
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | exitmsg: OK
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | cpuconsumptiontime: 37877 s
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | nevents: 400
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | neventsw: 0
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | pid: 511685
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | pgrp: 511685
[2025-06-03 13:16:29] 2025-06-03 17:16:08,769 | INFO     | corecount: 8
[2025-06-03 13:16:29] 2025-06-03 17:16:08,770 | INFO     | event service: False
[2025-06-03 13:16:29] 2025-06-03 17:16:08,770 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 5576: 2431933, 5577: 2440874, 5579: 2440930, 5582: 2441228}
[2025-06-03 13:16:29] 2025-06-03 17:16:08,770 | INFO     | --------------------------------------------------
[2025-06-03 13:16:29] 2025-06-03 17:16:08,770 | INFO     | 
[2025-06-03 13:16:29] 2025-06-03 17:16:08,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 13:16:29] 2025-06-03 17:16:08,783 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,784 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,784 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,784 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,784 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,785 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,786 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:16:29] 2025-06-03 17:16:08,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,786 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:16:29] 2025-06-03 17:16:08,786 | INFO     | job 6677620790 has completed (purged errors)
[2025-06-03 13:16:29] 2025-06-03 17:16:08,786 | INFO     | overall cleanup function is called
[2025-06-03 13:16:29] 2025-06-03 17:16:09,794 | INFO     | --- collectZombieJob: --- 10, [511685]
[2025-06-03 13:16:29] 2025-06-03 17:16:09,794 | INFO     | zombie collector waiting for pid 511685
[2025-06-03 13:16:29] 2025-06-03 17:16:09,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:16:29] 2025-06-03 17:16:09,795 | INFO     | collected zombie processes
[2025-06-03 13:16:29] 2025-06-03 17:16:09,795 | INFO     | will attempt to kill all subprocesses of pid=511685
[2025-06-03 13:16:29] 2025-06-03 17:16:09,985 | INFO     | process IDs to be killed: [511685] (in reverse order)
[2025-06-03 13:16:29] 2025-06-03 17:16:10,027 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:16:29] 2025-06-03 17:16:10,027 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:16:29] 2025-06-03 17:16:10,032 | INFO     | did not find any defunct processes belonging to 511685
[2025-06-03 13:16:29] 2025-06-03 17:16:10,036 | INFO     | did not find any defunct processes belonging to 511685
[2025-06-03 13:16:29] 2025-06-03 17:16:10,036 | INFO     | ready for new job
[2025-06-03 13:16:29] 2025-06-03 17:16:10,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:16:29] 2025-06-03 17:16:10,037 | INFO     | **************************************
[2025-06-03 13:16:29] 2025-06-03 17:16:10,037 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:16:29] 2025-06-03 17:16:10,037 | INFO     | **************************************
[2025-06-03 13:16:29] 2025-06-03 17:16:10,037 | INFO     | 
[2025-06-03 13:16:29] 2025-06-03 17:16:10,050 | INFO     | architecture information:
[2025-06-03 13:16:29] 2025-06-03 17:16:10,051 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:16:29] 2025-06-03 17:16:10,058 | INFO     | cat /etc/os-release:
[2025-06-03 13:16:29] NAME="CentOS Linux"
[2025-06-03 13:16:29] VERSION="7 (Core)"
[2025-06-03 13:16:29] ID="centos"
[2025-06-03 13:16:29] ID_LIKE="rhel fedora"
[2025-06-03 13:16:29] VERSION_ID="7"
[2025-06-03 13:16:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:16:29] ANSI_COLOR="0;31"
[2025-06-03 13:16:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:16:29] HOME_URL="https://www.centos.org/"
[2025-06-03 13:16:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:16:29] 
[2025-06-03 13:16:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:16:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:16:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:16:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:16:29] 
[2025-06-03 13:16:29] 2025-06-03 17:16:10,058 | INFO     | **************************************
[2025-06-03 13:16:29] 2025-06-03 17:16:10,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 13:16:29] 2025-06-03 17:16:10,570 | INFO     | sufficient remaining disk space (74233937920 B)
[2025-06-03 13:16:29] 2025-06-03 17:16:10,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:16:29] 2025-06-03 17:16:10,570 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:16:29] 2025-06-03 17:16:10,570 | INFO     | update_server=False
[2025-06-03 13:16:29] 2025-06-03 17:16:10,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:16:29] 2025-06-03 17:16:10,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:16:29] 2025-06-03 17:16:10,571 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:16:29] 2025-06-03 17:16:10,571 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:16:29] 2025-06-03 17:16:10,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:16:29] 2025-06-03 17:16:10,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:16:29] 2025-06-03 17:16:10,927 | INFO     | all data control threads have been joined
[2025-06-03 13:16:29] 2025-06-03 17:16:10,998 | INFO     | all payload control threads have been joined
[2025-06-03 13:16:29] 2025-06-03 17:16:11,239 | INFO     | all job control threads have been joined
[2025-06-03 13:16:29] 2025-06-03 17:16:11,402 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:16:29] 2025-06-03 17:16:11,402 | INFO     | aborting loop
[2025-06-03 13:16:29] 2025-06-03 17:16:11,576 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:11,576 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:11,604 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:11,782 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:11,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:16:29] 2025-06-03 17:16:11,932 | INFO     | [data] control thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:11,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:16:29] 2025-06-03 17:16:12,004 | INFO     | [payload] control thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:12,244 | INFO     | [job] control thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:12,356 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:12,406 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:12,654 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:12,703 | INFO     | [job] validate thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:13,039 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:13,067 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:13,920 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:15,978 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:21,449 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:16:29] 2025-06-03 17:16:22,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:16:29] 2025-06-03 17:16:23,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515671951168)>', '<ExcThread(monitor, started 140514804356864)>']
[2025-06-03 13:16:29] 2025-06-03 17:16:24,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:16:29] 2025-06-03 17:16:24,637 | INFO     | [monitor] control thread has ended
[2025-06-03 13:16:29] 2025-06-03 17:16:28,900 | INFO     | all workflow threads have been joined
[2025-06-03 13:16:29] 2025-06-03 17:16:28,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:16:29] 2025-06-03 17:16:28,901 | INFO     | traces error code: 0
[2025-06-03 13:16:29] 2025-06-03 17:16:28,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:16:29] 2025-06-03 17:16:28,995 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:16:29] 2025-06-03 17:16:28,997 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:16:29] 2025-06-03 17:16:28,998 [wrapper] pilotpid: 504813
[2025-06-03 13:16:29] 2025-06-03 17:16:29,000 [wrapper] Pilot exit status: 0
[2025-06-03 13:16:29] 2025-06-03 17:16:29,006 [wrapper] pandaids: 6677620790
[2025-06-03 13:16:29] 2025-06-03 17:16:29,035 [wrapper] cleanup supervisor_pilot  742951 504814
[2025-06-03 13:16:29] 2025-06-03 17:16:29,037 [wrapper] Test setup, not cleaning
[2025-06-03 13:16:29] 2025-06-03 17:16:29,038 [wrapper] apfmon messages muted
[2025-06-03 13:16:29] 2025-06-03 17:16:29,040 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:16:29] 2025-06-03 17:16:29,041 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:16:29]  *** Error codes and diagnostics ***
[2025-06-03 13:16:29]     "exeErrorCode": 0,
[2025-06-03 13:16:29]     "exeErrorDiag": "",
[2025-06-03 13:16:29]     "pilotErrorCode": 0,
[2025-06-03 13:16:29]     "pilotErrorDiag": "",
[2025-06-03 13:16:29]  *** Listing of results directory ***
[2025-06-03 13:16:29] total 387560
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:01 queuedata.json
[2025-06-03 13:16:29] -rwx------. 1 boincer umatlas     37140 Jun  3 09:03 runpilot2-wrapper.sh
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:16:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:42 run_atlas
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:42 job.xml
[2025-06-03 13:16:29] -rw-r--r--. 2 boincer umatlas 215376889 Jun  3 11:42 EVNT.45006593._001331.pool.root.1
[2025-06-03 13:16:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:42 start_atlas.sh
[2025-06-03 13:16:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:42 shared
[2025-06-03 13:16:29] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 11:42 input.tar.gz
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:42 boinc_lockfile
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:42 pandaJob.out
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas    983735 Jun  3 11:42 agis_schedconf.cvmfs.json
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:42 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:16:29] drwx------. 4 boincer umatlas      4096 Jun  3 11:42 pilot3
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas      6657 Jun  3 13:09 init_data.xml
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas        95 Jun  3 13:15 pilot_heartbeat.json
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:15 boinc_task_state.xml
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas 175924715 Jun  3 13:15 HITS.45006595._033084.pool.root.1
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas      1044 Jun  3 13:16 memory_monitor_summary.json
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas    322522 Jun  3 13:16 log.45006595._033084.job.log.tgz.1
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas      7703 Jun  3 13:16 heartbeat.json
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:16 boinc_mmap_file
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:16 wrapper_checkpoint.txt
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas      4548 Jun  3 13:16 pilotlog.txt
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas    541879 Jun  3 13:16 log.45006595._033084.job.log.1
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas       357 Jun  3 13:16 output.list
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:16 runtime_log
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas    880640 Jun  3 13:16 result.tar.gz
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 13:16 runtime_log.err
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas       648 Jun  3 13:16 8C9LDmTTgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWDkKDmU31lLm.diag
[2025-06-03 13:16:29] -rw-r--r--. 1 boincer umatlas     21417 Jun  3 13:16 stderr.txt
[2025-06-03 13:16:29] HITS file was successfully produced:
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas 175924715 Jun  3 13:15 shared/HITS.pool.root.1
[2025-06-03 13:16:29]  *** Contents of shared directory: ***
[2025-06-03 13:16:29] total 383516
[2025-06-03 13:16:29] -rw-r--r--. 2 boincer umatlas 215376889 Jun  3 11:42 ATLAS.root_0
[2025-06-03 13:16:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:42 start_atlas.sh
[2025-06-03 13:16:29] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 11:42 input.tar.gz
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas 175924715 Jun  3 13:15 HITS.pool.root.1
[2025-06-03 13:16:29] -rw-------. 1 boincer umatlas    880640 Jun  3 13:16 result.tar.gz
13:16:30 (501140): run_atlas exited; CPU time 38010.373617
13:16:30 (501140): called boinc_finish(0)

</stderr_txt>
]]>

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