Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:16:02 (3221473): wrapper (7.7.26015): starting
02:16:02 (3221473): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 02:16:02] Arguments: --nthreads 3
[2025-06-04 02:16:02] Threads: 3
[2025-06-04 02:16:02] Checking for CVMFS
[2025-06-04 02:16:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:16:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:16:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:16:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:16:02] 2.9.2.0 2609461 1810 79608 146761 0 56 32156798 36864001 0 130560 0 1667085 99.993 443765 54731 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 02:16:02] CVMFS is ok
[2025-06-04 02:16:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:16:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:16:02] Further information can be found at the LHC@home message board.
[2025-06-04 02:16:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:16:02] Checking for apptainer binary...
[2025-06-04 02:16:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:16:02] Running /usr/bin/apptainer --version
[2025-06-04 02:16:02] apptainer version 1.3.6-6.1
[2025-06-04 02:16:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:16:02] magicA161
[2025-06-04 02:16:02] apptainer works
[2025-06-04 02:16:02] Set ATHENA_PROC_NUMBER=3
[2025-06-04 02:16:02] Set ATHENA_CORE_NUMBER=3
[2025-06-04 02:16:02] Starting ATLAS job with PandaID=6677601420
[2025-06-04 02:16:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:29:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:29:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 03:29:01]  is_altstaged=None
[2025-06-04 03:29:01]  is_tar=False
[2025-06-04 03:29:01]  lfn=log.45006595._031216.job.log.tgz.1
[2025-06-04 03:29:01]  mtime=0
[2025-06-04 03:29:01]  protocol_id=None
[2025-06-04 03:29:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:29:01]  replicas=None
[2025-06-04 03:29:01]  scope=mc23_13p6TeV
[2025-06-04 03:29:01]  status=None
[2025-06-04 03:29:01]  status_code=0
[2025-06-04 03:29:01]  storage_token=
[2025-06-04 03:29:01]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677601420/log.45006595._031216.job.log.tgz.1
[2025-06-04 03:29:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/a7/log.45006595._031216.job.log.tgz.1
[2025-06-04 03:29:01]  workdir=None
[2025-06-04 03:29:01] ]
[2025-06-04 03:29:01] 2025-06-04 01:28:42,620 | INFO     | transferring file log.45006595._031216.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677601420/log.45006595._031216.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 03:29:01] 2025-06-04 01:28:42,620 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677601420/log.45006595._031216.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0312
[2025-06-04 03:29:01] 2025-06-04 01:28:42,633 | INFO     | adding to output.list: log.45006595._031216.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/a7/log.45006595._031216.job.log.tg
[2025-06-04 03:29:01] 2025-06-04 01:28:42,634 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:29:01] 2025-06-04 01:28:42,634 | INFO     | summary of transferred files:
[2025-06-04 03:29:01] 2025-06-04 01:28:42,634 | INFO     |  -- lfn=log.45006595._031216.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:29:01] 2025-06-04 01:28:42,634 | INFO     | stage-out finished correctly
[2025-06-04 03:29:01] 2025-06-04 01:28:43,091 | INFO     | PID=3225111 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 03:29:01] 2025-06-04 01:28:44,552 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:29:01] 2025-06-04 01:28:44,584 | INFO     | job 6677601420 has state=finished
[2025-06-04 03:29:01] 2025-06-04 01:28:44,584 | INFO     | preparing for final server update for job 6677601420 in state='finished'
[2025-06-04 03:29:01] 2025-06-04 01:28:44,585 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:29:01] 2025-06-04 01:28:44,585 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:29:01] 2025-06-04 01:28:44,585 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:29:01] 2025-06-04 01:28:44,585 | INFO     | job 6677601420 has finished - writing final server update
[2025-06-04 03:29:01] 2025-06-04 01:28:44,585 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:29:01] 2025-06-04 01:28:44,586 | INFO     | executing command: lscpu
[2025-06-04 03:29:01] 2025-06-04 01:28:44,600 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:29:01] 2025-06-04 01:28:44,921 | INFO     | monitor loop #337: job 0:6677601420 is in state 'finished'
[2025-06-04 03:29:01] 2025-06-04 01:28:44,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:29:01] 2025-06-04 01:28:47,424 | INFO     | monitor loop #338: job 0:6677601420 is in state 'finished'
[2025-06-04 03:29:01] 2025-06-04 01:28:47,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:29:01] 2025-06-04 01:28:48,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 03:29:01] 2025-06-04 01:28:48,154 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677601420/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:29:01] 2025-06-04 01:28:48,155 | INFO     | extracted standard info from prmon json
[2025-06-04 03:29:01] 2025-06-04 01:28:48,155 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:29:01] 2025-06-04 01:28:48,155 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:29:01] 2025-06-04 01:28:48,155 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:29:01] 2025-06-04 01:28:48,155 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | sum of square deviations: 85136480.0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | sum of deviations: -468293888.9999999
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | mean x: 1748998445.0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | mean y: 2365068.2615384613
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | -- intersect: 9622745000.154451
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | intersect: 9622745000.154451
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | chi2: 0.03138501682636443
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | -- intersect: 9622745000.154451
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | current memory leak: -5.50 B/s (using 65 data points, chi2=0.03)
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | ..............................
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . Timing measurements:
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . get job = 0 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . initial setup = 1 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . payload setup = 3 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . stage-in = 0 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . payload execution = 4334 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . stage-out = 0 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | . log creation = 0 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,156 | INFO     | ..............................
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | 
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | job summary report
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | --------------------------------------------------
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | PanDA job id: 6677601420
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | task id: 45006595
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | errors: (none)
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | pilot state: finished 
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | transexitcode: 0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | exeerrorcode: 0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | exeerrordiag: 
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | exitcode: 0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | exitmsg: OK
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | cpuconsumptiontime: 12452 s
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | nevents: 400
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | neventsw: 0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | pid: 3231609
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | pgrp: 3231609
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | corecount: 3
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | event service: False
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | sizes: {0: 2405187, 2: 2405393, 10: 2405421, 4341: 2440474, 4343: 2440474, 4347: 2440644}
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | --------------------------------------------------
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | 
[2025-06-04 03:29:01] 2025-06-04 01:28:48,188 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 03:29:01] 2025-06-04 01:28:48,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | job 6677601420 has completed (purged errors)
[2025-06-04 03:29:01] 2025-06-04 01:28:48,203 | INFO     | overall cleanup function is called
[2025-06-04 03:29:01] 2025-06-04 01:28:49,210 | INFO     | --- collectZombieJob: --- 10, [3231609]
[2025-06-04 03:29:01] 2025-06-04 01:28:49,210 | INFO     | zombie collector waiting for pid 3231609
[2025-06-04 03:29:01] 2025-06-04 01:28:49,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:29:01] 2025-06-04 01:28:49,210 | INFO     | collected zombie processes
[2025-06-04 03:29:01] 2025-06-04 01:28:49,210 | INFO     | will attempt to kill all subprocesses of pid=3231609
[2025-06-04 03:29:01] 2025-06-04 01:28:49,250 | INFO     | process IDs to be killed: [3231609] (in reverse order)
[2025-06-04 03:29:01] 2025-06-04 01:28:49,275 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:29:01] 2025-06-04 01:28:49,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:29:01] 2025-06-04 01:28:49,277 | INFO     | did not find any defunct processes belonging to 3231609
[2025-06-04 03:29:01] 2025-06-04 01:28:49,278 | INFO     | did not find any defunct processes belonging to 3231609
[2025-06-04 03:29:01] 2025-06-04 01:28:49,278 | INFO     | ready for new job
[2025-06-04 03:29:01] 2025-06-04 01:28:49,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:29:01] 2025-06-04 01:28:49,278 | INFO     | **************************************
[2025-06-04 03:29:01] 2025-06-04 01:28:49,279 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:29:01] 2025-06-04 01:28:49,279 | INFO     | **************************************
[2025-06-04 03:29:01] 2025-06-04 01:28:49,279 | INFO     | 
[2025-06-04 03:29:01] 2025-06-04 01:28:49,279 | INFO     | architecture information:
[2025-06-04 03:29:01] 2025-06-04 01:28:49,279 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:29:01] 2025-06-04 01:28:49,289 | INFO     | cat /etc/os-release:
[2025-06-04 03:29:01] NAME="CentOS Linux"
[2025-06-04 03:29:01] VERSION="7 (Core)"
[2025-06-04 03:29:01] ID="centos"
[2025-06-04 03:29:01] ID_LIKE="rhel fedora"
[2025-06-04 03:29:01] VERSION_ID="7"
[2025-06-04 03:29:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:29:01] ANSI_COLOR="0;31"
[2025-06-04 03:29:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:29:01] HOME_URL="https://www.centos.org/"
[2025-06-04 03:29:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:29:01] 
[2025-06-04 03:29:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:29:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:29:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:29:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:29:01] 
[2025-06-04 03:29:01] 2025-06-04 01:28:49,289 | INFO     | **************************************
[2025-06-04 03:29:01] 2025-06-04 01:28:49,792 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | INFO     | sufficient remaining disk space (368131964928 B)
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | INFO     | update_server=False
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:29:01] 2025-06-04 01:28:49,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:29:01] 2025-06-04 01:28:49,928 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 03:29:01] 2025-06-04 01:28:49,928 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 03:29:01] 2025-06-04 01:28:49,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:29:01] 2025-06-04 01:28:49,928 | INFO     | will abort loop
[2025-06-04 03:29:01] 2025-06-04 01:28:50,209 | INFO     | all payload control threads have been joined
[2025-06-04 03:29:01] 2025-06-04 01:28:50,511 | INFO     | all data control threads have been joined
[2025-06-04 03:29:01] 2025-06-04 01:28:50,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:29:01] 2025-06-04 01:28:50,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:29:01] 2025-06-04 01:28:50,743 | INFO     | all job control threads have been joined
[2025-06-04 03:29:01] 2025-06-04 01:28:50,812 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:50,812 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:50,836 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:50,842 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:50,929 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,036 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,214 | INFO     | [payload] control thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,372 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,393 | INFO     | [job] validate thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,443 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,516 | INFO     | [data] control thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,544 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:51,749 | INFO     | [job] control thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:52,687 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:54,597 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:29:01] 2025-06-04 01:28:55,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015121622848)>', '<ExcThread(monitor, started 140014121907968)>']
[2025-06-04 03:29:01] 2025-06-04 01:28:56,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:29:01] 2025-06-04 01:28:56,845 | INFO     | [monitor] control thread has ended
[2025-06-04 03:29:01] 2025-06-04 01:29:00,977 | INFO     | all workflow threads have been joined
[2025-06-04 03:29:01] 2025-06-04 01:29:00,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:29:01] 2025-06-04 01:29:00,978 | INFO     | traces error code: 0
[2025-06-04 03:29:01] 2025-06-04 01:29:00,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:29:01] 2025-06-04 01:29:01,029 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:29:01] 2025-06-04 01:29:01,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:29:01] 2025-06-04 01:29:01,035 [wrapper] pilotpid: 3225111
[2025-06-04 03:29:01] 2025-06-04 01:29:01,037 [wrapper] Pilot exit status: 0
[2025-06-04 03:29:01] 2025-06-04 01:29:01,045 [wrapper] pandaids: 6677601420
[2025-06-04 03:29:01] 2025-06-04 01:29:01,062 [wrapper] cleanup supervisor_pilot 3241979 3225112
[2025-06-04 03:29:01] 2025-06-04 01:29:01,064 [wrapper] Test setup, not cleaning
[2025-06-04 03:29:01] 2025-06-04 01:29:01,066 [wrapper] apfmon messages muted
[2025-06-04 03:29:01] 2025-06-04 01:29:01,069 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:29:01] 2025-06-04 01:29:01,071 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:29:01]  *** Error codes and diagnostics ***
[2025-06-04 03:29:01]     "exeErrorCode": 0,
[2025-06-04 03:29:01]     "exeErrorDiag": "",
[2025-06-04 03:29:01]     "pilotErrorCode": 0,
[2025-06-04 03:29:01]     "pilotErrorDiag": "",
[2025-06-04 03:29:01]  *** Listing of results directory ***
[2025-06-04 03:29:01] total 391348
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc      5111 Jun  3 13:50 queuedata.json
[2025-06-04 03:29:01] -rwx------ 1 boinc boinc     37140 Jun  3 13:50 runpilot2-wrapper.sh
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc    495897 Jun  3 13:50 pilot3.tar.gz
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:29:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:16 run_atlas
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:16 job.xml
[2025-06-04 03:29:01] -rw-r--r-- 2 boinc boinc 216357682 Jun  4 02:16 EVNT.45006593._001252.pool.root.1
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc      6932 Jun  4 02:16 init_data.xml
[2025-06-04 03:29:01] drwxrwx--x 2 boinc boinc      4096 Jun  4 02:16 shared
[2025-06-04 03:29:01] -rw-r--r-- 2 boinc boinc    508876 Jun  4 02:16 input.tar.gz
[2025-06-04 03:29:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:16 start_atlas.sh
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:16 boinc_lockfile
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc      2525 Jun  4 02:16 pandaJob.out
[2025-06-04 03:29:01] -rw------- 1 boinc boinc    986077 Jun  4 02:16 agis_schedconf.cvmfs.json
[2025-06-04 03:29:01] -rw------- 1 boinc boinc   1603667 Jun  4 02:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:29:01] drwx------ 4 boinc boinc      4096 Jun  4 02:16 pilot3
[2025-06-04 03:29:01] -rw------- 1 boinc boinc 179247262 Jun  4 03:28 HITS.45006595._031216.pool.root.1
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc       529 Jun  4 03:28 boinc_task_state.xml
[2025-06-04 03:29:01] -rw------- 1 boinc boinc        95 Jun  4 03:28 pilot_heartbeat.json
[2025-06-04 03:29:01] -rw------- 1 boinc boinc      1015 Jun  4 03:28 memory_monitor_summary.json
[2025-06-04 03:29:01] -rw------- 1 boinc boinc    217264 Jun  4 03:28 log.45006595._031216.job.log.tgz.1
[2025-06-04 03:29:01] -rw------- 1 boinc boinc      7646 Jun  4 03:28 heartbeat.json
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc      8192 Jun  4 03:28 boinc_mmap_file
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc        27 Jun  4 03:28 wrapper_checkpoint.txt
[2025-06-04 03:29:01] -rw------- 1 boinc boinc      4666 Jun  4 03:29 pilotlog.txt
[2025-06-04 03:29:01] -rw------- 1 boinc boinc    430689 Jun  4 03:29 log.45006595._031216.job.log.1
[2025-06-04 03:29:01] -rw------- 1 boinc boinc       357 Jun  4 03:29 output.list
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc       620 Jun  4 03:29 runtime_log
[2025-06-04 03:29:01] -rw------- 1 boinc boinc    665600 Jun  4 03:29 result.tar.gz
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc      8748 Jun  4 03:29 runtime_log.err
[2025-06-04 03:29:01] -rw------- 1 boinc boinc       661 Jun  4 03:29 2yJKDmTLfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmesjKDmfQgFGo.diag
[2025-06-04 03:29:01] -rw-r--r-- 1 boinc boinc     21435 Jun  4 03:29 stderr.txt
[2025-06-04 03:29:01] HITS file was successfully produced:
[2025-06-04 03:29:01] -rw------- 1 boinc boinc 179247262 Jun  4 03:28 shared/HITS.pool.root.1
[2025-06-04 03:29:01]  *** Contents of shared directory: ***
[2025-06-04 03:29:01] total 387512
[2025-06-04 03:29:01] -rw-r--r-- 2 boinc boinc 216357682 Jun  4 02:16 ATLAS.root_0
[2025-06-04 03:29:01] -rw-r--r-- 2 boinc boinc    508876 Jun  4 02:16 input.tar.gz
[2025-06-04 03:29:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:16 start_atlas.sh
[2025-06-04 03:29:01] -rw------- 1 boinc boinc 179247262 Jun  4 03:28 HITS.pool.root.1
[2025-06-04 03:29:01] -rw------- 1 boinc boinc    665600 Jun  4 03:29 result.tar.gz
03:29:02 (3221473): run_atlas exited; CPU time 12463.311836
03:29:02 (3221473): called boinc_finish(0)

</stderr_txt>
]]>

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