Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:58:18 (3128112): wrapper (7.7.26015): starting
08:58:18 (3128112): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 08:58:18] Arguments: --nthreads 12
[2025-06-03 08:58:18] Threads: 12
[2025-06-03 08:58:18] Checking for CVMFS
[2025-06-03 08:58:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:58:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:58:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:58:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:58:20] 2.11.5.0 626789 22425 234584 146748 1 327 41737178 45568000 15307 130560 0 191494842 99.803 121404063 29549 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 08:58:20] CVMFS is ok
[2025-06-03 08:58:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 08:58:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 08:58:20] Further information can be found at the LHC@home message board.
[2025-06-03 08:58:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:58:20] Checking for apptainer binary...
[2025-06-03 08:58:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:58:20] Running /usr/bin/apptainer --version
[2025-06-03 08:58:20] apptainer version 1.4.0-1.el9
[2025-06-03 08:58:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:58:22] wns0137.triumf.lcg
[2025-06-03 08:58:22] apptainer works
[2025-06-03 08:58:22] Set ATHENA_PROC_NUMBER=12
[2025-06-03 08:58:22] Set ATHENA_CORE_NUMBER=12
[2025-06-03 08:58:22] Starting ATLAS job with PandaID=6677660519
[2025-06-03 08:58:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:04:35]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:04:35] 2025-06-03 16:04:17,641 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677660519/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | INFO     | extracted standard info from prmon json
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:04:35] 2025-06-03 16:04:17,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:04:35] 2025-06-03 16:04:17,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | WARNING  | wrong length of table data, x=[1748966499.0], y=[1732.0] (must be same and length>=4)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | ..............................
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . Timing measurements:
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . get job = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . initial setup = 4 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . payload setup = 44 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . stage-in = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . payload execution = 57 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | . stage-out = 1 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | . log creation = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | ..............................
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677660519/pilotlog.txt
[2025-06-03 09:04:35] 2025-06-03 16:04:17,662 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 09:04:35] - Log from pilotlog.txt -
[2025-06-03 09:04:35] 2025-06-03 16:04:17,640 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:04:35] 2025-06-03 16:04:17,641 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677660519/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | INFO     | extracted standard info from prmon json
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:04:35] 2025-06-03 16:04:17,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:04:35] 2025-06-03 16:04:17,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | WARNING  | wrong length of table data, x=[1748966499.0], y=[1732.0] (must be same and length>=4)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | ..............................
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . Timing measurements:
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . get job = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . initial setup = 4 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . payload setup = 44 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . stage-in = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . payload execution = 57 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | . stage-out = 1 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | . log creation = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | ..............................
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677660519/pilotlog.txt
[2025-06-03 09:04:35] 2025-06-03 16:04:17,662 | WARNING  | 
[2025-06-03 09:04:35] [begin log extracts]
[2025-06-03 09:04:35] - Log from pilotlog.txt -
[2025-06-03 09:04:35] 2025-06-03 16:04:17,640 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:04:35] 2025-06-03 16:04:17,641 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677660519/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | INFO     | extracted standard info from prmon json
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:04:35] 2025-06-03 16:04:17,642 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:04:35] 2025-06-03 16:04:17,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:04:35] 2025-06-03 16:04:17,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | WARNING  | wrong length of table data, x=[1748966499.0], y=[1732.0] (must be same and length>=4)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | ..............................
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . Timing measurements:
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . get job = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . initial setup = 4 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . payload setup = 44 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . stage-in = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,644 | INFO     | . payload execution = 57 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | . stage-out = 1 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | . log creation = 0 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | ..............................
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 09:04:35] 2025-06-03 16:04:17,645 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677660519/pilotlog.txt
[2025-06-03 09:04:35] [end log extracts]
[2025-06-03 09:04:35] 2025-06-03 16:04:17,663 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,663 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | 
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | job summary report
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | --------------------------------------------------
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | PanDA job id: 6677660519
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | task id: 45006595
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 09:01:56,296 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:04:35] 2025-06-03 16:04:17,805 | INFO     | pilot state: failed 
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | transexitcode: 65
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | exeerrorcode: 65
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | exitcode: 65
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | cpuconsumptiontime: 22 s
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | nevents: 0
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | neventsw: 0
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | pid: 3148327
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | pgrp: 3148327
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | corecount: 12
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | event service: False
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | sizes: {0: 2404356, 1: 2405038, 2: 2405237, 14: 2405237, 25: 2405265, 26: 2405499, 36: 2405655, 106: 2428832, 107: 2428808, 110: 2433071, 113: 2433099, 240: 243352
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | --------------------------------------------------
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | 
[2025-06-03 09:04:35] 2025-06-03 16:04:17,806 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 09:04:35] 2025-06-03 16:04:18,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:04:35] 2025-06-03 16:04:18,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:04:35] 2025-06-03 16:04:18,015 | INFO     | job 6677660519 has completed (purged errors)
[2025-06-03 09:04:35] 2025-06-03 16:04:18,015 | INFO     | overall cleanup function is called
[2025-06-03 09:04:35] 2025-06-03 16:04:19,022 | INFO     | --- collectZombieJob: --- 10, [3148327]
[2025-06-03 09:04:35] 2025-06-03 16:04:19,022 | INFO     | zombie collector waiting for pid 3148327
[2025-06-03 09:04:35] 2025-06-03 16:04:19,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:04:35] 2025-06-03 16:04:19,022 | INFO     | collected zombie processes
[2025-06-03 09:04:35] 2025-06-03 16:04:19,022 | INFO     | will attempt to kill all subprocesses of pid=3148327
[2025-06-03 09:04:35] 2025-06-03 16:04:19,621 | INFO     | process IDs to be killed: [3148327] (in reverse order)
[2025-06-03 09:04:35] 2025-06-03 16:04:19,721 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:04:35] 2025-06-03 16:04:19,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:04:35] 2025-06-03 16:04:19,773 | INFO     | did not find any defunct processes belonging to 3148327
[2025-06-03 09:04:35] 2025-06-03 16:04:19,810 | INFO     | did not find any defunct processes belonging to 3148327
[2025-06-03 09:04:35] 2025-06-03 16:04:19,811 | INFO     | ready for new job
[2025-06-03 09:04:35] 2025-06-03 16:04:19,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:04:35] 2025-06-03 16:04:19,813 | INFO     | **************************************
[2025-06-03 09:04:35] 2025-06-03 16:04:19,813 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:04:35] 2025-06-03 16:04:19,813 | INFO     | **************************************
[2025-06-03 09:04:35] 2025-06-03 16:04:19,813 | INFO     | 
[2025-06-03 09:04:35] 2025-06-03 16:04:19,819 | INFO     | architecture information:
[2025-06-03 09:04:35] 2025-06-03 16:04:19,824 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:04:35] 2025-06-03 16:04:19,860 | INFO     | cat /etc/os-release:
[2025-06-03 09:04:35] NAME="CentOS Linux"
[2025-06-03 09:04:35] VERSION="7 (Core)"
[2025-06-03 09:04:35] ID="centos"
[2025-06-03 09:04:35] ID_LIKE="rhel fedora"
[2025-06-03 09:04:35] VERSION_ID="7"
[2025-06-03 09:04:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:04:35] ANSI_COLOR="0;31"
[2025-06-03 09:04:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:04:35] HOME_URL="https://www.centos.org/"
[2025-06-03 09:04:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:04:35] 
[2025-06-03 09:04:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:04:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:04:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:04:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:04:35] 
[2025-06-03 09:04:35] 2025-06-03 16:04:19,860 | INFO     | **************************************
[2025-06-03 09:04:35] 2025-06-03 16:04:20,363 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 09:04:35] 2025-06-03 16:04:20,380 | INFO     | sufficient remaining disk space (1949500964864 B)
[2025-06-03 09:04:35] 2025-06-03 16:04:20,381 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:04:35] 2025-06-03 16:04:20,381 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:04:35] 2025-06-03 16:04:20,381 | INFO     | update_server=False
[2025-06-03 09:04:35] 2025-06-03 16:04:20,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:04:35] 2025-06-03 16:04:20,382 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 09:04:35] 2025-06-03 16:04:20,382 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:04:35] 2025-06-03 16:04:20,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:04:35] 2025-06-03 16:04:20,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:04:35] 2025-06-03 16:04:20,622 | INFO     | all data control threads have been joined
[2025-06-03 09:04:35] 2025-06-03 16:04:20,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:04:35] 2025-06-03 16:04:20,786 | INFO     | aborting loop
[2025-06-03 09:04:35] 2025-06-03 16:04:20,803 | INFO     | all job control threads have been joined
[2025-06-03 09:04:35] 2025-06-03 16:04:21,387 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,628 | INFO     | [data] control thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,634 | INFO     | all payload control threads have been joined
[2025-06-03 09:04:35] 2025-06-03 16:04:21,638 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:04:35] 2025-06-03 16:04:21,766 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,792 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,805 | INFO     | [job] validate thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,809 | INFO     | [job] control thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,888 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:21,931 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:22,094 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:22,600 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:22,640 | INFO     | [payload] control thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:22,717 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:22,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:04:35] 2025-06-03 16:04:23,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:04:35] 2025-06-03 16:04:23,645 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:23,836 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:27,468 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:04:35] 2025-06-03 16:04:28,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979136313152)>', '<ExcThread(monitor, started 139978151556864)>']
[2025-06-03 09:04:35] 2025-06-03 16:04:29,436 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:04:35] 2025-06-03 16:04:29,436 | INFO     | [monitor] control thread has ended
[2025-06-03 09:04:35] 2025-06-03 16:04:33,604 | INFO     | all workflow threads have been joined
[2025-06-03 09:04:35] 2025-06-03 16:04:33,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:04:35] 2025-06-03 16:04:33,604 | INFO     | traces error code: 0
[2025-06-03 09:04:35] 2025-06-03 16:04:33,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:04:35] 2025-06-03 16:04:33,761 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:04:35] 2025-06-03 16:04:33,781 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:04:35] 2025-06-03 16:04:33,811 [wrapper] pilotpid: 3137032
[2025-06-03 09:04:35] 2025-06-03 16:04:33,840 [wrapper] Pilot exit status: 0
[2025-06-03 09:04:35] 2025-06-03 16:04:33,947 [wrapper] pandaids: 6677660519
[2025-06-03 09:04:35] 2025-06-03 16:04:34,282 [wrapper] cleanup supervisor_pilot 3137061 3137034
[2025-06-03 09:04:35] 2025-06-03 16:04:34,299 [wrapper] Test setup, not cleaning
[2025-06-03 09:04:35] 2025-06-03 16:04:34,314 [wrapper] apfmon messages muted
[2025-06-03 09:04:35] 2025-06-03 16:04:34,328 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:04:35] 2025-06-03 16:04:34,346 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:04:35]  *** Error codes and diagnostics ***
[2025-06-03 09:04:35]     "exeErrorCode": 65,
[2025-06-03 09:04:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 09:04:35]     "pilotErrorCode": 1305,
[2025-06-03 09:04:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 09:04:35]  *** Listing of results directory ***
[2025-06-03 09:04:35] total 216696
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:09 pilot3.tar.gz
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:30 queuedata.json
[2025-06-03 09:04:35] -rwx------. 1 boinc boinc     37140 Jun  3 07:30 runpilot2-wrapper.sh
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:04:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:58 run_atlas
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:58 job.xml
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc      6601 Jun  3 08:58 init_data.xml
[2025-06-03 09:04:35] -rw-r--r--. 2 boinc boinc 217855175 Jun  3 08:58 EVNT.45006593._001425.pool.root.1
[2025-06-03 09:04:35] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:58 start_atlas.sh
[2025-06-03 09:04:35] drwxrwx--x. 2 boinc boinc      4096 Jun  3 08:58 shared
[2025-06-03 09:04:35] -rw-r--r--. 2 boinc boinc    508880 Jun  3 08:58 input.tar.gz
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:58 boinc_lockfile
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc      2525 Jun  3 08:58 pandaJob.out
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc    983735 Jun  3 08:59 agis_schedconf.cvmfs.json
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc   1603667 Jun  3 08:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:04:35] drwx------. 4 boinc boinc      4096 Jun  3 08:59 pilot3
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc       525 Jun  3 09:01 boinc_task_state.xml
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc       966 Jun  3 09:02 memory_monitor_summary.json
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc     21189 Jun  3 09:02 log.45006595._035460.job.log.tgz.1
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc      8307 Jun  3 09:04 heartbeat.json
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc        95 Jun  3 09:04 pilot_heartbeat.json
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc        23 Jun  3 09:04 wrapper_checkpoint.txt
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc      4475 Jun  3 09:04 pilotlog.txt
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc     80294 Jun  3 09:04 log.45006595._035460.job.log.1
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:04 boinc_mmap_file
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc       188 Jun  3 09:04 output.list
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:04 runtime_log
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc    122880 Jun  3 09:04 result.tar.gz
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc      8484 Jun  3 09:04 runtime_log.err
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc       645 Jun  3 09:04 ns2NDmNqhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoZkKDm7ejzHm.diag
[2025-06-03 09:04:35] -rw-r--r--. 1 boinc boinc     21287 Jun  3 09:04 stderr.txt
[2025-06-03 09:04:35] No HITS result produced
[2025-06-03 09:04:35]  *** Contents of shared directory: ***
[2025-06-03 09:04:35] total 213392
[2025-06-03 09:04:35] -rw-r--r--. 2 boinc boinc 217855175 Jun  3 08:58 ATLAS.root_0
[2025-06-03 09:04:35] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:58 start_atlas.sh
[2025-06-03 09:04:35] -rw-r--r--. 2 boinc boinc    508880 Jun  3 08:58 input.tar.gz
[2025-06-03 09:04:35] -rw-------. 1 boinc boinc    122880 Jun  3 09:04 result.tar.gz
09:04:36 (3128112): run_atlas exited; CPU time 35.029647
09:04:36 (3128112): called boinc_finish(0)

</stderr_txt>
]]>

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