Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:53:24 (1792267): wrapper (7.7.26015): starting
08:53:24 (1792267): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 08:53:24] Arguments: --nthreads 12
[2025-06-03 08:53:24] Threads: 12
[2025-06-03 08:53:24] Checking for CVMFS
[2025-06-03 08:53:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:53:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:53:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:53:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:53:27] 2.11.5.0 3714510 22639 208572 146748 0 197 29052515 45568001 13774 130560 0 226292236 99.788 142524474 27859 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 08:53:27] CVMFS is ok
[2025-06-03 08:53:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 08:53:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 08:53:27] Further information can be found at the LHC@home message board.
[2025-06-03 08:53:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:53:27] Checking for apptainer binary...
[2025-06-03 08:53:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:53:27] Running /usr/bin/apptainer --version
[2025-06-03 08:53:27] apptainer version 1.4.0-1.el9
[2025-06-03 08:53:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:53:27] wns0054.triumf.lcg
[2025-06-03 08:53:27] apptainer works
[2025-06-03 08:53:27] Set ATHENA_PROC_NUMBER=12
[2025-06-03 08:53:27] Set ATHENA_CORE_NUMBER=12
[2025-06-03 08:53:27] Starting ATLAS job with PandaID=6677660514
[2025-06-03 08:53:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:57:47]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | wrong length of table data, x=[1748966098.0], y=[1860.0] (must be same and length>=4)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | INFO     | ..............................
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . Timing measurements:
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . get job = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . initial setup = 5 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . payload setup = 15 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . stage-in = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . payload execution = 36 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . stage-out = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . log creation = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | ..............................
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677660514/pilotlog.txt
[2025-06-03 08:57:47] 2025-06-03 15:57:34,146 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 08:57:47] - Log from pilotlog.txt -
[2025-06-03 08:57:47] 2025-06-03 15:57:34,130 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 08:57:47] 2025-06-03 15:57:34,130 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677660514/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | INFO     | extracted standard info from prmon json
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | wrong length of table data, x=[1748966098.0], y=[1860.0] (must be same and length>=4)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | INFO     | ..............................
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . Timing measurements:
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . get job = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . initial setup = 5 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . payload setup = 15 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . stage-in = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . payload execution = 36 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . stage-out = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . log creation = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | ..............................
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677660514/pilotlog.txt
[2025-06-03 08:57:47] 2025-06-03 15:57:34,146 | WARNING  | 
[2025-06-03 08:57:47] [begin log extracts]
[2025-06-03 08:57:47] - Log from pilotlog.txt -
[2025-06-03 08:57:47] 2025-06-03 15:57:34,130 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 08:57:47] 2025-06-03 15:57:34,130 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677660514/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | INFO     | extracted standard info from prmon json
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:57:47] 2025-06-03 15:57:34,131 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | WARNING  | wrong length of table data, x=[1748966098.0], y=[1860.0] (must be same and length>=4)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,132 | INFO     | ..............................
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . Timing measurements:
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . get job = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . initial setup = 5 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . payload setup = 15 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . stage-in = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . payload execution = 36 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . stage-out = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | . log creation = 0 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | ..............................
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 08:57:47] 2025-06-03 15:57:34,133 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677660514/pilotlog.txt
[2025-06-03 08:57:47] [end log extracts]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,146 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,147 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 08:57:47] 2025-06-03 15:57:34,206 | INFO     | 
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | job summary report
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | --------------------------------------------------
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | PanDA job id: 6677660514
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | task id: 45006595
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 08:55:15,986 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | pilot state: failed 
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | transexitcode: 65
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | exeerrorcode: 65
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | exitcode: 65
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | nevents: 0
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | neventsw: 0
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | pid: 1804034
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | pgrp: 1804034
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | corecount: 12
[2025-06-03 08:57:47] 2025-06-03 15:57:34,207 | INFO     | event service: False
[2025-06-03 08:57:47] 2025-06-03 15:57:34,208 | INFO     | sizes: {0: 2405010, 1: 2405209, 12: 2405209, 19: 2405443, 22: 2405471, 55: 2428704, 56: 2428808, 57: 2433071, 59: 2433099, 184: 2433241}
[2025-06-03 08:57:47] 2025-06-03 15:57:34,208 | INFO     | --------------------------------------------------
[2025-06-03 08:57:47] 2025-06-03 15:57:34,208 | INFO     | 
[2025-06-03 08:57:47] 2025-06-03 15:57:34,208 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | job 6677660514 has completed (purged errors)
[2025-06-03 08:57:47] 2025-06-03 15:57:34,253 | INFO     | overall cleanup function is called
[2025-06-03 08:57:47] 2025-06-03 15:57:35,030 | INFO     | PID=1795824 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 08:57:47] 2025-06-03 15:57:35,031 | INFO     | .. there are 21 such processes running
[2025-06-03 08:57:47] 2025-06-03 15:57:35,260 | INFO     | --- collectZombieJob: --- 10, [1804034]
[2025-06-03 08:57:47] 2025-06-03 15:57:35,260 | INFO     | zombie collector waiting for pid 1804034
[2025-06-03 08:57:47] 2025-06-03 15:57:35,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:57:47] 2025-06-03 15:57:35,261 | INFO     | collected zombie processes
[2025-06-03 08:57:47] 2025-06-03 15:57:35,261 | INFO     | will attempt to kill all subprocesses of pid=1804034
[2025-06-03 08:57:47] 2025-06-03 15:57:35,677 | INFO     | process IDs to be killed: [1804034] (in reverse order)
[2025-06-03 08:57:47] 2025-06-03 15:57:35,806 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:57:47] 2025-06-03 15:57:35,807 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:57:47] 2025-06-03 15:57:35,850 | INFO     | did not find any defunct processes belonging to 1804034
[2025-06-03 08:57:47] 2025-06-03 15:57:35,897 | INFO     | did not find any defunct processes belonging to 1804034
[2025-06-03 08:57:47] 2025-06-03 15:57:35,897 | INFO     | ready for new job
[2025-06-03 08:57:47] 2025-06-03 15:57:35,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:57:47] 2025-06-03 15:57:35,899 | INFO     | **************************************
[2025-06-03 08:57:47] 2025-06-03 15:57:35,900 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:57:47] 2025-06-03 15:57:35,900 | INFO     | **************************************
[2025-06-03 08:57:47] 2025-06-03 15:57:35,900 | INFO     | 
[2025-06-03 08:57:47] 2025-06-03 15:57:35,922 | INFO     | architecture information:
[2025-06-03 08:57:47] 2025-06-03 15:57:35,967 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:57:47] 2025-06-03 15:57:35,980 | INFO     | cat /etc/os-release:
[2025-06-03 08:57:47] NAME="CentOS Linux"
[2025-06-03 08:57:47] VERSION="7 (Core)"
[2025-06-03 08:57:47] ID="centos"
[2025-06-03 08:57:47] ID_LIKE="rhel fedora"
[2025-06-03 08:57:47] VERSION_ID="7"
[2025-06-03 08:57:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:57:47] ANSI_COLOR="0;31"
[2025-06-03 08:57:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:57:47] HOME_URL="https://www.centos.org/"
[2025-06-03 08:57:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:57:47] 
[2025-06-03 08:57:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:57:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:57:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:57:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:57:47] 
[2025-06-03 08:57:47] 2025-06-03 15:57:35,981 | INFO     | **************************************
[2025-06-03 08:57:47] 2025-06-03 15:57:36,485 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 08:57:47] 2025-06-03 15:57:36,551 | INFO     | sufficient remaining disk space (2106491666432 B)
[2025-06-03 08:57:47] 2025-06-03 15:57:36,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:57:47] 2025-06-03 15:57:36,552 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:57:47] 2025-06-03 15:57:36,552 | INFO     | update_server=False
[2025-06-03 08:57:47] 2025-06-03 15:57:36,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:57:47] 2025-06-03 15:57:36,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:57:47] 2025-06-03 15:57:37,014 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 08:57:47] 2025-06-03 15:57:37,014 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 08:57:47] 2025-06-03 15:57:37,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:57:47] 2025-06-03 15:57:37,015 | INFO     | will abort loop
[2025-06-03 08:57:47] 2025-06-03 15:57:37,038 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:57:47] 2025-06-03 15:57:37,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:57:47] 2025-06-03 15:57:37,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:57:47] 2025-06-03 15:57:37,115 | INFO     | all data control threads have been joined
[2025-06-03 08:57:47] 2025-06-03 15:57:37,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:57:47] 2025-06-03 15:57:37,238 | INFO     | all job control threads have been joined
[2025-06-03 08:57:47] 2025-06-03 15:57:37,289 | INFO     | all payload control threads have been joined
[2025-06-03 08:57:47] 2025-06-03 15:57:37,557 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,020 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,121 | INFO     | [data] control thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,132 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,151 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,243 | INFO     | [job] control thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,295 | INFO     | [payload] control thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,426 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,460 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,465 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,573 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,913 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,977 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:38,992 | INFO     | [job] validate thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:39,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:57:47] 2025-06-03 15:57:40,226 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:41,128 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:57:47] 2025-06-03 15:57:41,342 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140593637279552)>', '<ExcThread(monitor, started 140593246226176)>']
[2025-06-03 08:57:47] 2025-06-03 15:57:42,072 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:57:47] 2025-06-03 15:57:42,072 | INFO     | [monitor] control thread has ended
[2025-06-03 08:57:47] 2025-06-03 15:57:46,376 | INFO     | all workflow threads have been joined
[2025-06-03 08:57:47] 2025-06-03 15:57:46,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:57:47] 2025-06-03 15:57:46,377 | INFO     | traces error code: 0
[2025-06-03 08:57:47] 2025-06-03 15:57:46,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:57:47] 2025-06-03 15:57:46,671 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:57:47] 2025-06-03 15:57:46,673 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:57:47] 2025-06-03 15:57:46,676 [wrapper] pilotpid: 1795824
[2025-06-03 08:57:47] 2025-06-03 15:57:46,678 [wrapper] Pilot exit status: 0
[2025-06-03 08:57:47] 2025-06-03 15:57:46,822 [wrapper] pandaids: 6677660514
[2025-06-03 08:57:47] 2025-06-03 15:57:47,215 [wrapper] cleanup supervisor_pilot 1795830 1795825
[2025-06-03 08:57:47] 2025-06-03 15:57:47,217 [wrapper] Test setup, not cleaning
[2025-06-03 08:57:47] 2025-06-03 15:57:47,265 [wrapper] apfmon messages muted
[2025-06-03 08:57:47] 2025-06-03 15:57:47,276 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:57:47] 2025-06-03 15:57:47,281 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:57:47]  *** Error codes and diagnostics ***
[2025-06-03 08:57:47]     "exeErrorCode": 65,
[2025-06-03 08:57:47]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 08:57:47]     "pilotErrorCode": 1305,
[2025-06-03 08:57:47]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 08:57:47]  *** Listing of results directory ***
[2025-06-03 08:57:47] total 216688
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc    495897 Jun  3 07:09 pilot3.tar.gz
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc      5111 Jun  3 07:30 queuedata.json
[2025-06-03 08:57:47] -rwx------. 1 boinc boinc     37140 Jun  3 07:30 runpilot2-wrapper.sh
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:57:47] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:53 run_atlas
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:53 job.xml
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc      6600 Jun  3 08:53 init_data.xml
[2025-06-03 08:57:47] -rw-r--r--. 2 boinc boinc 217855175 Jun  3 08:53 EVNT.45006593._001425.pool.root.1
[2025-06-03 08:57:47] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:53 start_atlas.sh
[2025-06-03 08:57:47] drwxrwx--x. 2 boinc boinc      4096 Jun  3 08:53 shared
[2025-06-03 08:57:47] -rw-r--r--. 2 boinc boinc    508882 Jun  3 08:53 input.tar.gz
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:53 boinc_lockfile
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc      2525 Jun  3 08:53 pandaJob.out
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc    983735 Jun  3 08:53 agis_schedconf.cvmfs.json
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc   1603667 Jun  3 08:53 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:57:47] drwx------. 4 boinc boinc      4096 Jun  3 08:53 pilot3
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc       522 Jun  3 08:55 boinc_task_state.xml
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc       961 Jun  3 08:55 memory_monitor_summary.json
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc     20982 Jun  3 08:55 log.45006595._035455.job.log.tgz.1
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc        95 Jun  3 08:56 pilot_heartbeat.json
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc      8343 Jun  3 08:57 heartbeat.json
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:57 boinc_mmap_file
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc        22 Jun  3 08:57 wrapper_checkpoint.txt
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc      4538 Jun  3 08:57 pilotlog.txt
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc     77801 Jun  3 08:57 log.45006595._035455.job.log.1
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc       188 Jun  3 08:57 output.list
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:57 runtime_log
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc    122880 Jun  3 08:57 result.tar.gz
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc       644 Jun  3 08:57 skuNDmNqhg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjZkKDm6EKsan.diag
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc      8484 Jun  3 08:57 runtime_log.err
[2025-06-03 08:57:47] -rw-r--r--. 1 boinc boinc     21757 Jun  3 08:57 stderr.txt
[2025-06-03 08:57:47] No HITS result produced
[2025-06-03 08:57:47]  *** Contents of shared directory: ***
[2025-06-03 08:57:47] total 213388
[2025-06-03 08:57:47] -rw-r--r--. 2 boinc boinc 217855175 Jun  3 08:53 ATLAS.root_0
[2025-06-03 08:57:47] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:53 start_atlas.sh
[2025-06-03 08:57:47] -rw-r--r--. 2 boinc boinc    508882 Jun  3 08:53 input.tar.gz
[2025-06-03 08:57:47] -rw-------. 1 boinc boinc    122880 Jun  3 08:57 result.tar.gz
08:57:49 (1792267): run_atlas exited; CPU time 25.114182
08:57:49 (1792267): called boinc_finish(0)

</stderr_txt>
]]>

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