Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 17:37:38 (21704): Detected: vboxwrapper 26206
2025-06-03 17:37:38 (21704): Detected: BOINC client v8.0.2
2025-06-03 17:37:39 (21704): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-06-03 17:37:40 (21704): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 17:37:41 (21704): Create VM. (boinc_89359a4fb12592f0, slot#12)
2025-06-03 17:37:42 (21704): Setting Memory Size for VM. (4300MB)
2025-06-03 17:37:42 (21704): Setting CPU Count for VM. (3)
2025-06-03 17:37:43 (21704): Setting Chipset Options for VM.
2025-06-03 17:37:43 (21704): Setting Graphics Controller Options for VM.
2025-06-03 17:37:44 (21704): Setting Boot Options for VM.
2025-06-03 17:37:44 (21704): Setting Network Configuration for NAT.
2025-06-03 17:37:45 (21704): Enabling VM Network Access.
2025-06-03 17:37:45 (21704): Disabling USB Support for VM.
2025-06-03 17:37:46 (21704): Disabling COM Port Support for VM.
2025-06-03 17:37:46 (21704): Disabling LPT Port Support for VM.
2025-06-03 17:37:47 (21704): Disabling Audio Support for VM.
2025-06-03 17:37:47 (21704): Disabling Clipboard Support for VM.
2025-06-03 17:37:48 (21704): Disabling Drag and Drop Support for VM.
2025-06-03 17:37:48 (21704): Adding storage controller(s) to VM.
2025-06-03 17:37:49 (21704): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 17:37:52 (21704): Adding VirtualBox Guest Additions to VM.
2025-06-03 17:37:52 (21704): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 17:37:52 (21704): forwarding host port 53582 to guest port 80
2025-06-03 17:37:52 (21704): Enabling remote desktop for VM.
2025-06-03 17:37:53 (21704): Required extension pack not installed, remote desktop not enabled.
2025-06-03 17:37:53 (21704): Enabling shared directory for VM.
2025-06-03 17:37:53 (21704): Starting VM using VBoxManage interface. (boinc_89359a4fb12592f0, slot#12)
2025-06-03 17:37:58 (21704): Successfully started VM. (PID = '20700')
2025-06-03 17:37:58 (21704): Reporting VM Process ID to BOINC.
2025-06-03 17:37:58 (21704): Guest Log: BIOS: VirtualBox 7.0.10
2025-06-03 17:37:58 (21704): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 17:37:58 (21704): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 17:37:58 (21704): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 17:37:58 (21704): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 17:37:58 (21704): Detected: Web Application Enabled (http://localhost:53582)
2025-06-03 17:37:59 (21704): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 17:38:09 (21704): Preference change detected
2025-06-03 17:38:09 (21704): Setting CPU throttle for VM. (100%)
2025-06-03 17:38:10 (21704): Setting network throttle for VM. (2000KB)
2025-06-03 17:38:10 (21704): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 17:38:10 (21704): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 17:38:11 (21704): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 17:38:11 (21704): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 17:38:13 (21704): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 17:38:13 (21704): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 17:38:13 (21704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 17:38:20 (21704): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 17:38:20 (21704): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 17:38:23 (21704): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000075 main     Log opened 2025-06-03T17:38:10.525541000Z
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000146 main     OS Product: Linux
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000171 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000185 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000199 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000199 main     Process ID: 1278
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000199 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 17:38:23 (21704): Guest Log: 00:00:00.000659 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 17:38:23 (21704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 17:38:23 (21704): Guest Log: [INFO] Mounting shared directory
2025-06-03 17:38:23 (21704): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 17:38:25 (21704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 17:38:25 (21704): Guest Log: [INFO] Detected branch: prod
2025-06-03 17:38:25 (21704): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 17:38:25 (21704): Guest Log: Copying input files
2025-06-03 17:38:25 (21704): Guest Log: Copied input files into RunAtlas.
2025-06-03 17:38:25 (21704): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 17:38:25 (21704): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 17:38:25 (21704): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 17:38:25 (21704): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 17:38:33 (21704): Guest Log: 00:00:10.001625 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 177 467 873 000ns (GuestNow=1 748 965 113 059 084 000 ns GuestLast=1 748 972 290 526 957 000 ns fSetTimeLastLoop=true )
2025-06-03 17:38:38 (21704): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 17:38:38 (21704): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 17:38:38 (21704): Guest Log: 2.6.3.0 1551 0 32368 146748 4 1 3120513 4096000 0 65024 0 0 n/a 1290 1117 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 17:38:38 (21704): Guest Log: copied the webapp to /var/www
2025-06-03 17:38:38 (21704): Guest Log: ATHENA_PROC_NUMBER=3
2025-06-03 17:38:38 (21704): Guest Log: ATHENA_CORE_NUMBER=3
2025-06-03 17:38:38 (21704): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 17:38:38 (21704): Guest Log:  *** Starting ATLAS job. (PandaID=6677619831 taskID=45006595) ***
2025-06-03 18:04:01 (21704): VM state change detected. (old = 'running', new = 'paused')
2025-06-03 18:04:21 (21704): VM state change detected. (old = 'paused', new = 'running')
2025-06-03 18:39:27 (21704): Guest Log:  *** Job finished ***
2025-06-03 18:39:27 (21704): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:38:53,745 | INFO     | [data] queue_monitor thread has finished
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:38:59,001 | INFO     | job.realtimelogging is not enabled
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:00,003 | INFO     | [payload] run_realtimelog thread has finished
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:01,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043255351104)>', '<ExcThread(monitor, started 140042332776192)>']
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:02,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:02,030 | INFO     | [monitor] control thread has ended
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,842 | INFO     | all workflow threads have been joined
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,843 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,843 | INFO     | traces error code: 0
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,894 [wrapper] ==== pilot stdout END ====
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,897 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,900 [wrapper] pilotpid: 5833
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,903 [wrapper] Pilot exit status: 0
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,974 [wrapper] pandaids: 6677619831
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,992 [wrapper] cleanup supervisor_pilot 30645 5834
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,995 [wrapper] Test setup, not cleaning
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:06,998 [wrapper] apfmon messages muted
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:07,000 [wrapper] ==== wrapper stdout END ====
2025-06-03 18:39:27 (21704): Guest Log: 2025-06-03 16:39:07,002 [wrapper] ==== wrapper stderr END ====
2025-06-03 18:39:27 (21704): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 18:39:27 (21704): Guest Log:     "exeErrorCode": 0,
2025-06-03 18:39:27 (21704): Guest Log:     "exeErrorDiag": "",
2025-06-03 18:39:27 (21704): Guest Log:     "pilotErrorCode": 0,
2025-06-03 18:39:27 (21704): Guest Log:     "pilotErrorDiag": "",
2025-06-03 18:39:27 (21704): Guest Log:  *** Listing of results directory ***
2025-06-03 18:39:27 (21704): Guest Log: total 176216
2025-06-03 18:39:27 (21704): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 12:45 pilot3.tar.gz
2025-06-03 18:39:27 (21704): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 12:46 queuedata.json
2025-06-03 18:39:27 (21704): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 12:49 runpilot2-wrapper.sh
2025-06-03 18:39:27 (21704): Guest Log: -rwxr-xr-x. 1 atlas atlas      9328 Jun  3 15:38 init_data.xml
2025-06-03 18:39:27 (21704): Guest Log: -rwxr-xr-x. 1 atlas atlas    508880 Jun  3 15:38 input.tar.gz
2025-06-03 18:39:27 (21704): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  3 15:38 start_atlas.sh
2025-06-03 18:39:27 (21704): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 15:38 EVNT.45006593._001324.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 18:39:27 (21704): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  3 15:38 pandaJob.out
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas    983735 Jun  3 15:39 agis_schedconf.cvmfs.json
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 15:39 agis_ddmendpoints.agis.ALL.json
2025-06-03 18:39:27 (21704): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 15:39 pilot3
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas 175573386 Jun  3 16:38 HITS.45006595._032899.pool.root.1
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 16:38 pilot_heartbeat.json
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas      1024 Jun  3 16:38 memory_monitor_summary.json
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas    207078 Jun  3 16:38 log.45006595._032899.job.log.tgz.1
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas      7703 Jun  3 16:38 heartbeat.json
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  3 16:39 pilotlog.txt
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas    347303 Jun  3 16:39 log.45006595._032899.job.log.1
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 16:39 output.list
2025-06-03 18:39:27 (21704): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 16:39 runtime_log
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas    573440 Jun  3 16:39 result.tar.gz
2025-06-03 18:39:27 (21704): Guest Log: -rw-r--r--. 1 atlas atlas      8586 Jun  3 16:39 runtime_log.err
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas       649 Jun  3 16:39 kzzKDmcGgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRBkKDma812un.diag
2025-06-03 18:39:27 (21704): Guest Log: Looking for outputfile HITS.45006595._032899.pool.root.1
2025-06-03 18:39:27 (21704): Guest Log: HITS file was successfully produced
2025-06-03 18:39:27 (21704): Guest Log: -rw-------. 1 atlas atlas 175573386 Jun  3 16:38 /home/atlas/RunAtlas/HITS.45006595._032899.pool.root.1
2025-06-03 18:39:27 (21704): Guest Log: Successfully finished the ATLAS job!
2025-06-03 18:39:27 (21704): Guest Log: Copying the results back to the shared directory!
2025-06-03 18:39:27 (21704): Guest Log:  *** Contents of shared directory: ***
2025-06-03 18:39:27 (21704): Guest Log: total 381292
2025-06-03 18:39:27 (21704): Guest Log: -rwxrwxrwx. 1 root root 213751588 Jun  3 15:37 ATLAS.root_0
2025-06-03 18:39:27 (21704): Guest Log: -rwxrwxrwx. 1 root root 175573386 Jun  3  2025 HITS.pool.root.1
2025-06-03 18:39:27 (21704): Guest Log: -rwxrwxrwx. 1 root root      9328 Jun  3 15:37 init_data.xml
2025-06-03 18:39:27 (21704): Guest Log: -rwxrwxrwx. 1 root root    508880 Jun  3 15:36 input.tar.gz
2025-06-03 18:39:27 (21704): Guest Log: -rwxrwxrwx. 1 root root    573440 Jun  3  2025 result.tar.gz
2025-06-03 18:39:27 (21704): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  3 15:36 start_atlas.sh
2025-06-03 18:39:27 (21704): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 18:39:27 (21704): VM Completion File Detected.
2025-06-03 18:39:27 (21704): Powering off VM.
2025-06-03 18:39:28 (21704): Successfully stopped VM.
2025-06-03 18:39:28 (21704): Deregistering VM. (boinc_89359a4fb12592f0, slot#12)
2025-06-03 18:39:28 (21704): Removing network bandwidth throttle group from VM.
2025-06-03 18:39:28 (21704): Removing VM from VirtualBox.
18:39:34 (21704): called boinc_finish(0)

</stderr_txt>
]]>

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