Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:27:23 (45976): wrapper (7.7.26015): starting
11:27:23 (45976): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:27:23] Arguments: --nthreads 8
[2025-06-03 11:27:23] Threads: 8
[2025-06-03 11:27:23] Checking for CVMFS
[2025-06-03 11:27:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:27:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:27:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:27:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:27:23] 2.11.2.0 21479 67697 433248 146748 0 187 16676784 18432001 3665 130560 0 106554429 98.640 312876174 36558 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 11:27:23] CVMFS is ok
[2025-06-03 11:27:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:27:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:27:23] Further information can be found at the LHC@home message board.
[2025-06-03 11:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:27:23] Checking for apptainer binary...
[2025-06-03 11:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:27:23] Running /usr/bin/apptainer --version
[2025-06-03 11:27:23] apptainer version 1.3.2-1.el7
[2025-06-03 11:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:27:24] c-211-24.aglt2.org
[2025-06-03 11:27:24] apptainer works
[2025-06-03 11:27:24] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:27:24] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:27:24] Starting ATLAS job with PandaID=6677619517
[2025-06-03 11:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:05:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:05:32] 2025-06-03 18:05:19,666 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 14:05:32] 2025-06-03 18:05:19,666 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677619517/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 14:05:32] 2025-06-03 18:05:19,667 | INFO     | extracted standard info from prmon json
[2025-06-03 14:05:32] 2025-06-03 18:05:19,667 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 14:05:32] 2025-06-03 18:05:19,667 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:05:32] 2025-06-03 18:05:19,668 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:05:32] 2025-06-03 18:05:19,668 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:05:32] 2025-06-03 18:05:19,670 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:05:32] 2025-06-03 18:05:19,671 | INFO     | sum of square deviations: 1154663510.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,671 | INFO     | sum of deviations: 11240627319.000002
[2025-06-03 14:05:32] 2025-06-03 18:05:19,671 | INFO     | mean x: 1748969178.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,671 | INFO     | mean y: 2478758.4903225806
[2025-06-03 14:05:32] 2025-06-03 18:05:19,672 | INFO     | -- intersect: -17023702940.380354
[2025-06-03 14:05:32] 2025-06-03 18:05:19,672 | INFO     | intersect: -17023702940.380354
[2025-06-03 14:05:32] 2025-06-03 18:05:19,672 | INFO     | chi2: 1.5670627324394732
[2025-06-03 14:05:32] 2025-06-03 18:05:19,672 | INFO     | sum of square deviations: 1046484737.5
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | sum of deviations: 11127205962.500002
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | mean x: 1748969025.5
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | mean y: 2478598.42
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | -- intersect: -18594198325.185318
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | intersect: -18594198325.185318
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | chi2: 1.5687506974565824
[2025-06-03 14:05:32] 2025-06-03 18:05:19,673 | INFO     | current chi2=1.5687506974565824 (change=-0.10771521663854654 %)
[2025-06-03 14:05:32] 2025-06-03 18:05:19,674 | INFO     | right removable region: 149
[2025-06-03 14:05:32] 2025-06-03 18:05:19,674 | INFO     | sum of square deviations: 1046484737.5
[2025-06-03 14:05:32] 2025-06-03 18:05:19,674 | INFO     | sum of deviations: -13310181913.500002
[2025-06-03 14:05:32] 2025-06-03 18:05:19,674 | INFO     | mean x: 1748969330.5
[2025-06-03 14:05:32] 2025-06-03 18:05:19,675 | INFO     | mean y: 2512912.2733333334
[2025-06-03 14:05:32] 2025-06-03 18:05:19,675 | INFO     | -- intersect: 22247557790.51964
[2025-06-03 14:05:32] 2025-06-03 18:05:19,675 | INFO     | intersect: 22247557790.51964
[2025-06-03 14:05:32] 2025-06-03 18:05:19,675 | INFO     | chi2: 0.06990398592039873
[2025-06-03 14:05:32] 2025-06-03 18:05:19,675 | INFO     | current chi2=0.06990398592039873 (change=95.5391711848333 %)
[2025-06-03 14:05:32] 2025-06-03 18:05:19,675 | INFO     | sum of square deviations: 945282840.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,676 | INFO     | sum of deviations: -15409358901.000006
[2025-06-03 14:05:32] 2025-06-03 18:05:19,676 | INFO     | mean x: 1748969483.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,676 | INFO     | mean y: 2515997.0896551725
[2025-06-03 14:05:32] 2025-06-03 18:05:19,676 | INFO     | -- intersect: 28513028755.835423
[2025-06-03 14:05:32] 2025-06-03 18:05:19,676 | INFO     | intersect: 28513028755.835423
[2025-06-03 14:05:32] 2025-06-03 18:05:19,677 | INFO     | chi2: 0.036956829558443406
[2025-06-03 14:05:32] 2025-06-03 18:05:19,677 | INFO     | current chi2=0.036956829558443406 (change=47.132013901858194 %)
[2025-06-03 14:05:32] 2025-06-03 18:05:19,677 | INFO     | sum of square deviations: 850825255.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,677 | INFO     | sum of deviations: -14305172952.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,677 | INFO     | mean x: 1748969635.5
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | mean y: 2514209.5142857144
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | -- intersect: 29408450359.850937
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | intersect: 29408450359.850937
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | chi2: 0.036589511543666665
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | current chi2=0.036589511543666665 (change=0.9939110555895097 %)
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | left removable region: 30
[2025-06-03 14:05:32] 2025-06-03 18:05:19,678 | INFO     | sum of square deviations: 522502820.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,679 | INFO     | sum of deviations: -7442126453.000001
[2025-06-03 14:05:32] 2025-06-03 18:05:19,679 | INFO     | mean x: 1748969910.0
[2025-06-03 14:05:32] 2025-06-03 18:05:19,679 | INFO     | mean y: 2503023.8571428573
[2025-06-03 14:05:32] 2025-06-03 18:05:19,679 | INFO     | -- intersect: 24913479069.33003
[2025-06-03 14:05:32] 2025-06-03 18:05:19,679 | INFO     | intersect: 24913479069.33003
[2025-06-03 14:05:32] 2025-06-03 18:05:19,679 | INFO     | chi2: 0.030524597662461156
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | -- intersect: 24913479069.33003
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | current memory leak: -14.24 B/s (using 119 data points, chi2=0.03)
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | ..............................
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | . Timing measurements:
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | . get job = 0 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | . initial setup = 2 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | . payload setup = 6 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,680 | INFO     | . stage-in = 0 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,681 | INFO     | . payload execution = 9435 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,681 | INFO     | . stage-out = 1 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,681 | INFO     | . log creation = 0 s
[2025-06-03 14:05:32] 2025-06-03 18:05:19,681 | INFO     | ..............................
[2025-06-03 14:05:32] 2025-06-03 18:05:20,075 | INFO     | 
[2025-06-03 14:05:32] 2025-06-03 18:05:20,075 | INFO     | job summary report
[2025-06-03 14:05:32] 2025-06-03 18:05:20,075 | INFO     | --------------------------------------------------
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | PanDA job id: 6677619517
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | task id: 45006595
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | errors: (none)
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | pilot state: finished 
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | transexitcode: 0
[2025-06-03 14:05:32] 2025-06-03 18:05:20,076 | INFO     | exeerrorcode: 0
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | exeerrordiag: 
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | exitcode: 0
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | exitmsg: OK
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | cpuconsumptiontime: 69892 s
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | nevents: 400
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | neventsw: 0
[2025-06-03 14:05:32] 2025-06-03 18:05:20,077 | INFO     | pid: 7328
[2025-06-03 14:05:32] 2025-06-03 18:05:20,078 | INFO     | pgrp: 7328
[2025-06-03 14:05:32] 2025-06-03 18:05:20,078 | INFO     | corecount: 8
[2025-06-03 14:05:32] 2025-06-03 18:05:20,078 | INFO     | event service: False
[2025-06-03 14:05:32] 2025-06-03 18:05:20,078 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 9445: 2433638, 9447: 2442635, 9450: 2442749}
[2025-06-03 14:05:32] 2025-06-03 18:05:20,078 | INFO     | --------------------------------------------------
[2025-06-03 14:05:32] 2025-06-03 18:05:20,078 | INFO     | 
[2025-06-03 14:05:32] 2025-06-03 18:05:20,079 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 14:05:32] 2025-06-03 18:05:20,097 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,098 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,098 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,098 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,098 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,098 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:05:32] 2025-06-03 18:05:20,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,101 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:05:32] 2025-06-03 18:05:20,101 | INFO     | job 6677619517 has completed (purged errors)
[2025-06-03 14:05:32] 2025-06-03 18:05:20,101 | INFO     | overall cleanup function is called
[2025-06-03 14:05:32] 2025-06-03 18:05:21,109 | INFO     | --- collectZombieJob: --- 10, [7328]
[2025-06-03 14:05:32] 2025-06-03 18:05:21,109 | INFO     | zombie collector waiting for pid 7328
[2025-06-03 14:05:32] 2025-06-03 18:05:21,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:05:32] 2025-06-03 18:05:21,110 | INFO     | collected zombie processes
[2025-06-03 14:05:32] 2025-06-03 18:05:21,110 | INFO     | will attempt to kill all subprocesses of pid=7328
[2025-06-03 14:05:32] 2025-06-03 18:05:21,303 | INFO     | process IDs to be killed: [7328] (in reverse order)
[2025-06-03 14:05:32] 2025-06-03 18:05:21,373 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:05:32] 2025-06-03 18:05:21,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:05:32] 2025-06-03 18:05:21,377 | INFO     | did not find any defunct processes belonging to 7328
[2025-06-03 14:05:32] 2025-06-03 18:05:21,380 | INFO     | did not find any defunct processes belonging to 7328
[2025-06-03 14:05:32] 2025-06-03 18:05:21,381 | INFO     | ready for new job
[2025-06-03 14:05:32] 2025-06-03 18:05:21,381 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:05:32] 2025-06-03 18:05:21,382 | INFO     | **************************************
[2025-06-03 14:05:32] 2025-06-03 18:05:21,382 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:05:32] 2025-06-03 18:05:21,382 | INFO     | **************************************
[2025-06-03 14:05:32] 2025-06-03 18:05:21,383 | INFO     | 
[2025-06-03 14:05:32] 2025-06-03 18:05:21,384 | INFO     | architecture information:
[2025-06-03 14:05:32] 2025-06-03 18:05:21,384 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:05:32] 2025-06-03 18:05:21,397 | INFO     | cat /etc/os-release:
[2025-06-03 14:05:32] NAME="CentOS Linux"
[2025-06-03 14:05:32] VERSION="7 (Core)"
[2025-06-03 14:05:32] ID="centos"
[2025-06-03 14:05:32] ID_LIKE="rhel fedora"
[2025-06-03 14:05:32] VERSION_ID="7"
[2025-06-03 14:05:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:05:32] ANSI_COLOR="0;31"
[2025-06-03 14:05:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:05:32] HOME_URL="https://www.centos.org/"
[2025-06-03 14:05:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:05:32] 
[2025-06-03 14:05:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:05:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:05:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:05:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:05:32] 
[2025-06-03 14:05:32] 2025-06-03 18:05:21,398 | INFO     | **************************************
[2025-06-03 14:05:32] 2025-06-03 18:05:21,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 14:05:32] 2025-06-03 18:05:21,916 | INFO     | sufficient remaining disk space (55669948416 B)
[2025-06-03 14:05:32] 2025-06-03 18:05:21,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:05:32] 2025-06-03 18:05:21,917 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:05:32] 2025-06-03 18:05:21,917 | INFO     | update_server=False
[2025-06-03 14:05:32] 2025-06-03 18:05:21,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:05:32] 2025-06-03 18:05:21,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:05:32] 2025-06-03 18:05:22,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:05:32] 2025-06-03 18:05:22,212 | INFO     | aborting loop
[2025-06-03 14:05:32] 2025-06-03 18:05:22,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:05:32] 2025-06-03 18:05:22,387 | INFO     | all data control threads have been joined
[2025-06-03 14:05:32] 2025-06-03 18:05:22,544 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:05:32] 2025-06-03 18:05:22,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:05:32] 2025-06-03 18:05:22,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:05:32] 2025-06-03 18:05:22,687 | INFO     | all job control threads have been joined
[2025-06-03 14:05:32] 2025-06-03 18:05:22,921 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:22,930 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,106 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,156 | INFO     | all payload control threads have been joined
[2025-06-03 14:05:32] 2025-06-03 18:05:23,218 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,392 | INFO     | [data] control thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,420 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,582 | INFO     | [job] validate thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,591 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,691 | INFO     | [job] control thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,924 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:23,958 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:24,162 | INFO     | [payload] control thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:24,457 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:24,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:05:32] 2025-06-03 18:05:25,788 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:26,324 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:05:32] 2025-06-03 18:05:27,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695127504704)>', '<ExcThread(monitor, started 140694832260864)>']
[2025-06-03 14:05:32] 2025-06-03 18:05:27,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:05:32] 2025-06-03 18:05:27,559 | INFO     | [monitor] control thread has ended
[2025-06-03 14:05:32] 2025-06-03 18:05:32,030 | INFO     | all workflow threads have been joined
[2025-06-03 14:05:32] 2025-06-03 18:05:32,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:05:32] 2025-06-03 18:05:32,031 | INFO     | traces error code: 0
[2025-06-03 14:05:32] 2025-06-03 18:05:32,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:05:32] 2025-06-03 18:05:32,182 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:05:32] 2025-06-03 18:05:32,185 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:05:32] 2025-06-03 18:05:32,187 [wrapper] pilotpid: 753
[2025-06-03 14:05:32] 2025-06-03 18:05:32,190 [wrapper] Pilot exit status: 0
[2025-06-03 14:05:32] 2025-06-03 18:05:32,200 [wrapper] pandaids: 6677619517
[2025-06-03 14:05:32] 2025-06-03 18:05:32,237 [wrapper] cleanup supervisor_pilot 33006 754
[2025-06-03 14:05:32] 2025-06-03 18:05:32,240 [wrapper] Test setup, not cleaning
[2025-06-03 14:05:32] 2025-06-03 18:05:32,242 [wrapper] apfmon messages muted
[2025-06-03 14:05:32] 2025-06-03 18:05:32,245 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:05:32] 2025-06-03 18:05:32,247 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:05:32]  *** Error codes and diagnostics ***
[2025-06-03 14:05:32]     "exeErrorCode": 0,
[2025-06-03 14:05:32]     "exeErrorDiag": "",
[2025-06-03 14:05:32]     "pilotErrorCode": 0,
[2025-06-03 14:05:32]     "pilotErrorDiag": "",
[2025-06-03 14:05:32]  *** Listing of results directory ***
[2025-06-03 14:05:32] total 393176
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 08:33 pilot3.tar.gz
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 08:40 queuedata.json
[2025-06-03 14:05:32] -rwx------ 1 boincer umatlas     37140 Jun  3 08:41 runpilot2-wrapper.sh
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas       100 Jun  3 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:05:32] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 11:27 run_atlas
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas       105 Jun  3 11:27 job.xml
[2025-06-03 14:05:32] -rw-r--r-- 2 boincer umatlas 213133043 Jun  3 11:27 EVNT.45006593._001317.pool.root.1
[2025-06-03 14:05:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:27 start_atlas.sh
[2025-06-03 14:05:32] drwxrwx--x 2 boincer umatlas      4096 Jun  3 11:27 shared
[2025-06-03 14:05:32] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 11:27 input.tar.gz
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas         0 Jun  3 11:27 boinc_lockfile
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 11:27 pandaJob.out
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas    983735 Jun  3 11:27 agis_schedconf.cvmfs.json
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas   1603667 Jun  3 11:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:05:32] drwx------ 4 boincer umatlas      4096 Jun  3 11:27 pilot3
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas      6035 Jun  3 14:02 init_data.xml
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas 183186512 Jun  3 14:04 HITS.45006595._032737.pool.root.1
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas        95 Jun  3 14:04 pilot_heartbeat.json
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas       530 Jun  3 14:04 boinc_task_state.xml
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas      1046 Jun  3 14:05 memory_monitor_summary.json
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas    362486 Jun  3 14:05 log.45006595._032737.job.log.tgz.1
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas      7733 Jun  3 14:05 heartbeat.json
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 14:05 boinc_mmap_file
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas        27 Jun  3 14:05 wrapper_checkpoint.txt
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas      4353 Jun  3 14:05 pilotlog.txt
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas    863952 Jun  3 14:05 log.45006595._032737.job.log.1
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas       357 Jun  3 14:05 output.list
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas       620 Jun  3 14:05 runtime_log
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas   1249280 Jun  3 14:05 result.tar.gz
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 14:05 runtime_log.err
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas       657 Jun  3 14:05 boJMDmK8fg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm08jKDm240B7n.diag
[2025-06-03 14:05:32] -rw-r--r-- 1 boincer umatlas     20769 Jun  3 14:05 stderr.txt
[2025-06-03 14:05:32] HITS file was successfully produced:
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas 183186512 Jun  3 14:04 shared/HITS.pool.root.1
[2025-06-03 14:05:32]  *** Contents of shared directory: ***
[2025-06-03 14:05:32] total 388780
[2025-06-03 14:05:32] -rw-r--r-- 2 boincer umatlas 213133043 Jun  3 11:27 ATLAS.root_0
[2025-06-03 14:05:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:27 start_atlas.sh
[2025-06-03 14:05:32] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 11:27 input.tar.gz
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas 183186512 Jun  3 14:04 HITS.pool.root.1
[2025-06-03 14:05:32] -rw------- 1 boincer umatlas   1249280 Jun  3 14:05 result.tar.gz
14:05:33 (45976): run_atlas exited; CPU time 70074.854966
14:05:33 (45976): called boinc_finish(0)

</stderr_txt>
]]>

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