Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:38:54 (13145): wrapper (7.7.26015): starting
01:38:54 (13145): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:38:54] Arguments: --nthreads 8
[2025-06-04 01:38:54] Threads: 8
[2025-06-04 01:38:54] Checking for CVMFS
[2025-06-04 01:38:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:38:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:38:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:38:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:38:58] 2.11.2.0 408 32438 98600 146761 3 111 23863155 25165824 3125 130560 0 16199447 99.792 18721148 2035 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:38:58] CVMFS is ok
[2025-06-04 01:38:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:38:58] Checking for apptainer binary...
[2025-06-04 01:38:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:38:58] Running /usr/bin/apptainer --version
[2025-06-04 01:38:58] apptainer version 1.3.2-1.el7
[2025-06-04 01:38:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:39:03] cg-vwn429.simple-grid.lan
[2025-06-04 01:39:03] apptainer works
[2025-06-04 01:39:03] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:39:03] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:39:03] Starting ATLAS job with PandaID=6677619491
[2025-06-04 01:39:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:32:18]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:32:18] 2025-06-04 03:32:04,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:32:18] 2025-06-04 03:32:04,078 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:32:18] 2025-06-04 03:32:04,078 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:32:18] 2025-06-04 03:32:04,083 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:32:18] 2025-06-04 03:32:04,084 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 05:32:18] 2025-06-04 03:32:04,085 | INFO     | sum of deviations: 71841411568.50002
[2025-06-04 05:32:18] 2025-06-04 03:32:04,086 | INFO     | mean x: 1749001244.5
[2025-06-04 05:32:18] 2025-06-04 03:32:04,086 | INFO     | mean y: 2424487.8211009176
[2025-06-04 05:32:18] 2025-06-04 03:32:04,086 | INFO     | -- intersect: -39111033131.483955
[2025-06-04 05:32:18] 2025-06-04 03:32:04,086 | INFO     | intersect: -39111033131.483955
[2025-06-04 05:32:18] 2025-06-04 03:32:04,086 | INFO     | chi2: 7.261633009144886
[2025-06-04 05:32:18] 2025-06-04 03:32:04,087 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,089 | INFO     | sum of deviations: 84470058965.00003
[2025-06-04 05:32:18] 2025-06-04 03:32:04,089 | INFO     | mean x: 1749001092.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,089 | INFO     | mean y: 2433214.920187793
[2025-06-04 05:32:18] 2025-06-04 03:32:04,089 | INFO     | -- intersect: -49301914355.60468
[2025-06-04 05:32:18] 2025-06-04 03:32:04,089 | INFO     | intersect: -49301914355.60468
[2025-06-04 05:32:18] 2025-06-04 03:32:04,090 | INFO     | chi2: 6.562707805479275
[2025-06-04 05:32:18] 2025-06-04 03:32:04,090 | INFO     | current chi2=6.562707805479275 (change=9.624903968369441 %)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,090 | INFO     | right removable region: 212
[2025-06-04 05:32:18] 2025-06-04 03:32:04,090 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,092 | INFO     | sum of deviations: -2889630756.000004
[2025-06-04 05:32:18] 2025-06-04 03:32:04,092 | INFO     | mean x: 1749001397.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,092 | INFO     | mean y: 2477199.3427230045
[2025-06-04 05:32:18] 2025-06-04 03:32:04,092 | INFO     | -- intersect: 1689126714.3885167
[2025-06-04 05:32:18] 2025-06-04 03:32:04,093 | INFO     | intersect: 1689126714.3885167
[2025-06-04 05:32:18] 2025-06-04 03:32:04,093 | INFO     | chi2: 2.3886307199922827
[2025-06-04 05:32:18] 2025-06-04 03:32:04,093 | INFO     | current chi2=2.3886307199922827 (change=67.10614930575288 %)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,094 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,095 | INFO     | sum of deviations: -39867477261.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,095 | INFO     | mean x: 1749001549.5
[2025-06-04 05:32:18] 2025-06-04 03:32:04,096 | INFO     | mean y: 2504381.2596153845
[2025-06-04 05:32:18] 2025-06-04 03:32:04,096 | INFO     | -- intersect: 24991601155.419773
[2025-06-04 05:32:18] 2025-06-04 03:32:04,096 | INFO     | intersect: 24991601155.419773
[2025-06-04 05:32:18] 2025-06-04 03:32:04,096 | INFO     | chi2: 0.9725042449866521
[2025-06-04 05:32:18] 2025-06-04 03:32:04,096 | INFO     | current chi2=0.9725042449866521 (change=59.286119999754746 %)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,097 | INFO     | sum of square deviations: 2593916542.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,099 | INFO     | sum of deviations: -40250937047.000015
[2025-06-04 05:32:18] 2025-06-04 03:32:04,099 | INFO     | mean x: 1749001702.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,099 | INFO     | mean y: 2504625.0591133004
[2025-06-04 05:32:18] 2025-06-04 03:32:04,099 | INFO     | -- intersect: 27142528701.553814
[2025-06-04 05:32:18] 2025-06-04 03:32:04,099 | INFO     | intersect: 27142528701.553814
[2025-06-04 05:32:18] 2025-06-04 03:32:04,100 | INFO     | chi2: 0.9457504541895485
[2025-06-04 05:32:18] 2025-06-04 03:32:04,100 | INFO     | current chi2=0.9457504541895485 (change=2.751020464437233 %)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,100 | INFO     | left removable region: 30
[2025-06-04 05:32:18] 2025-06-04 03:32:04,100 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 05:32:18] 2025-06-04 03:32:04,102 | INFO     | sum of deviations: -5304575799.0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,102 | INFO     | mean x: 1749001976.5
[2025-06-04 05:32:18] 2025-06-04 03:32:04,102 | INFO     | mean y: 2497304.4285714286
[2025-06-04 05:32:18] 2025-06-04 03:32:04,102 | INFO     | -- intersect: 4965693957.71603
[2025-06-04 05:32:18] 2025-06-04 03:32:04,102 | INFO     | intersect: 4965693957.71603
[2025-06-04 05:32:18] 2025-06-04 03:32:04,103 | INFO     | chi2: 0.06734068022287132
[2025-06-04 05:32:18] 2025-06-04 03:32:04,103 | INFO     | -- intersect: 4965693957.71603
[2025-06-04 05:32:18] 2025-06-04 03:32:04,103 | INFO     | current memory leak: -2.84 B/s (using 182 data points, chi2=0.07)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,104 | INFO     | ..............................
[2025-06-04 05:32:18] 2025-06-04 03:32:04,104 | INFO     | . Timing measurements:
[2025-06-04 05:32:18] 2025-06-04 03:32:04,104 | INFO     | . get job = 0 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,104 | INFO     | . initial setup = 9 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,104 | INFO     | . payload setup = 147 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,104 | INFO     | . stage-in = 0 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,105 | INFO     | . payload execution = 13397 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,105 | INFO     | . stage-out = 6 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,105 | INFO     | . log creation = 0 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,105 | INFO     | ..............................
[2025-06-04 05:32:18] 2025-06-04 03:32:04,655 | INFO     | 
[2025-06-04 05:32:18] 2025-06-04 03:32:04,655 | INFO     | job summary report
[2025-06-04 05:32:18] 2025-06-04 03:32:04,655 | INFO     | --------------------------------------------------
[2025-06-04 05:32:18] 2025-06-04 03:32:04,655 | INFO     | PanDA job id: 6677619491
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | task id: 45006595
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | errors: (none)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | pilot state: finished 
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | transexitcode: 0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | exeerrorcode: 0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | exeerrordiag: 
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | exitcode: 0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | exitmsg: OK
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | cpuconsumptiontime: 48996 s
[2025-06-04 05:32:18] 2025-06-04 03:32:04,656 | INFO     | nevents: 400
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | neventsw: 0
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | pid: 27439
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | pgrp: 27439
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | corecount: 8
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | event service: False
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | sizes: {0: 2404356, 1: 2405042, 2: 2405241, 12: 2405241, 23: 2405269, 34: 2405297, 45: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 88: 2405593, 93: 2406107, 98
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | --------------------------------------------------
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | 
[2025-06-04 05:32:18] 2025-06-04 03:32:04,657 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 05:32:18] 2025-06-04 03:32:04,711 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,714 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:32:18] 2025-06-04 03:32:04,714 | INFO     | job 6677619491 has completed (purged errors)
[2025-06-04 05:32:18] 2025-06-04 03:32:04,714 | INFO     | overall cleanup function is called
[2025-06-04 05:32:18] 2025-06-04 03:32:05,722 | INFO     | --- collectZombieJob: --- 10, [27439]
[2025-06-04 05:32:18] 2025-06-04 03:32:05,723 | INFO     | zombie collector waiting for pid 27439
[2025-06-04 05:32:18] 2025-06-04 03:32:05,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:32:18] 2025-06-04 03:32:05,723 | INFO     | collected zombie processes
[2025-06-04 05:32:18] 2025-06-04 03:32:05,723 | INFO     | will attempt to kill all subprocesses of pid=27439
[2025-06-04 05:32:18] 2025-06-04 03:32:05,944 | INFO     | process IDs to be killed: [27439] (in reverse order)
[2025-06-04 05:32:18] 2025-06-04 03:32:06,139 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:32:18] 2025-06-04 03:32:06,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:32:18] 2025-06-04 03:32:06,143 | INFO     | did not find any defunct processes belonging to 27439
[2025-06-04 05:32:18] 2025-06-04 03:32:06,147 | INFO     | did not find any defunct processes belonging to 27439
[2025-06-04 05:32:18] 2025-06-04 03:32:06,147 | INFO     | ready for new job
[2025-06-04 05:32:18] 2025-06-04 03:32:06,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:32:18] 2025-06-04 03:32:06,149 | INFO     | **************************************
[2025-06-04 05:32:18] 2025-06-04 03:32:06,149 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:32:18] 2025-06-04 03:32:06,149 | INFO     | **************************************
[2025-06-04 05:32:18] 2025-06-04 03:32:06,149 | INFO     | 
[2025-06-04 05:32:18] 2025-06-04 03:32:06,151 | INFO     | pilot is running in a VM
[2025-06-04 05:32:18] 2025-06-04 03:32:06,151 | INFO     | architecture information:
[2025-06-04 05:32:18] 2025-06-04 03:32:06,152 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:32:18] 2025-06-04 03:32:06,248 | INFO     | cat /etc/os-release:
[2025-06-04 05:32:18] NAME="CentOS Linux"
[2025-06-04 05:32:18] VERSION="7 (Core)"
[2025-06-04 05:32:18] ID="centos"
[2025-06-04 05:32:18] ID_LIKE="rhel fedora"
[2025-06-04 05:32:18] VERSION_ID="7"
[2025-06-04 05:32:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:32:18] ANSI_COLOR="0;31"
[2025-06-04 05:32:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:32:18] HOME_URL="https://www.centos.org/"
[2025-06-04 05:32:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:32:18] 
[2025-06-04 05:32:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:32:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:32:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:32:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:32:18] 
[2025-06-04 05:32:18] 2025-06-04 03:32:06,249 | INFO     | **************************************
[2025-06-04 05:32:18] 2025-06-04 03:32:06,757 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 05:32:18] 2025-06-04 03:32:06,850 | INFO     | PID=16837 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:32:18] 2025-06-04 03:32:06,851 | INFO     | .. there are 9 such processes running
[2025-06-04 05:32:18] 2025-06-04 03:32:06,859 | INFO     | sufficient remaining disk space (497232642048 B)
[2025-06-04 05:32:18] 2025-06-04 03:32:06,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:32:18] 2025-06-04 03:32:06,860 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:32:18] 2025-06-04 03:32:06,860 | INFO     | update_server=False
[2025-06-04 05:32:18] 2025-06-04 03:32:06,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:32:18] 2025-06-04 03:32:06,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:32:18] 2025-06-04 03:32:06,861 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:32:18] 2025-06-04 03:32:06,861 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:32:18] 2025-06-04 03:32:06,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:32:18] 2025-06-04 03:32:06,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:32:18] 2025-06-04 03:32:06,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:32:18] 2025-06-04 03:32:06,889 | INFO     | all data control threads have been joined
[2025-06-04 05:32:18] 2025-06-04 03:32:07,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:32:18] 2025-06-04 03:32:07,246 | INFO     | aborting loop
[2025-06-04 05:32:18] 2025-06-04 03:32:07,299 | INFO     | all job control threads have been joined
[2025-06-04 05:32:18] 2025-06-04 03:32:07,614 | INFO     | all payload control threads have been joined
[2025-06-04 05:32:18] 2025-06-04 03:32:07,865 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:07,895 | INFO     | [data] control thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,235 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,252 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,296 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,305 | INFO     | [job] control thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,567 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,619 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,620 | INFO     | [payload] control thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,866 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,886 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,956 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:08,978 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:09,253 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:32:18] 2025-06-04 03:32:09,294 | INFO     | [job] validate thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:10,259 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:10,873 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:32:18] 2025-06-04 03:32:11,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712500901696)>', '<ExcThread(monitor, started 139711913907968)>']
[2025-06-04 05:32:18] 2025-06-04 03:32:11,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:32:18] 2025-06-04 03:32:11,893 | INFO     | [monitor] control thread has ended
[2025-06-04 05:32:18] 2025-06-04 03:32:16,271 | INFO     | all workflow threads have been joined
[2025-06-04 05:32:18] 2025-06-04 03:32:16,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:32:18] 2025-06-04 03:32:16,272 | INFO     | traces error code: 0
[2025-06-04 05:32:18] 2025-06-04 03:32:16,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:32:18] 2025-06-04 03:32:16,539 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:32:18] 2025-06-04 03:32:16,585 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:32:18] 2025-06-04 03:32:16,630 [wrapper] pilotpid: 16837
[2025-06-04 05:32:18] 2025-06-04 03:32:16,668 [wrapper] Pilot exit status: 0
[2025-06-04 05:32:18] 2025-06-04 03:32:17,011 [wrapper] pandaids: 6677619491
[2025-06-04 05:32:18] 2025-06-04 03:32:17,661 [wrapper] cleanup supervisor_pilot 26082 16838
[2025-06-04 05:32:18] 2025-06-04 03:32:17,789 [wrapper] Test setup, not cleaning
[2025-06-04 05:32:18] 2025-06-04 03:32:17,912 [wrapper] apfmon messages muted
[2025-06-04 05:32:18] 2025-06-04 03:32:17,968 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:32:18] 2025-06-04 03:32:18,045 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:32:18]  *** Error codes and diagnostics ***
[2025-06-04 05:32:18]     "exeErrorCode": 0,
[2025-06-04 05:32:18]     "exeErrorDiag": "",
[2025-06-04 05:32:18]     "pilotErrorCode": 0,
[2025-06-04 05:32:18]     "pilotErrorDiag": "",
[2025-06-04 05:32:18]  *** Listing of results directory ***
[2025-06-04 05:32:18] total 388312
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:33 pilot3.tar.gz
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:37 queuedata.json
[2025-06-04 05:32:18] -rwx------. 1 boinc boinc     37140 Jun  3 14:37 runpilot2-wrapper.sh
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:32:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:38 run_atlas
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:38 job.xml
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc      6393 Jun  4 01:38 init_data.xml
[2025-06-04 05:32:18] -rw-r--r--. 2 boinc boinc 213814920 Jun  4 01:38 EVNT.45006593._001316.pool.root.1
[2025-06-04 05:32:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:38 start_atlas.sh
[2025-06-04 05:32:18] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:38 shared
[2025-06-04 05:32:18] -rw-r--r--. 2 boinc boinc    508881 Jun  4 01:38 input.tar.gz
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:38 boinc_lockfile
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc      2525 Jun  4 01:39 pandaJob.out
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc    986077 Jun  4 01:42 agis_schedconf.cvmfs.json
[2025-06-04 05:32:18] drwx------. 4 boinc boinc      4096 Jun  4 01:42 pilot3
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc 176855976 Jun  4 05:30 HITS.45006595._032711.pool.root.1
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:30 boinc_task_state.xml
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc      1018 Jun  4 05:31 memory_monitor_summary.json
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc   1603667 Jun  4 05:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc    392522 Jun  4 05:31 log.45006595._032711.job.log.tgz.1
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc        95 Jun  4 05:31 pilot_heartbeat.json
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc      7688 Jun  4 05:32 heartbeat.json
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc      8192 Jun  4 05:32 boinc_mmap_file
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc        28 Jun  4 05:32 wrapper_checkpoint.txt
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc      4932 Jun  4 05:32 pilotlog.txt
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc   1180523 Jun  4 05:32 log.45006595._032711.job.log.1
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc       357 Jun  4 05:32 output.list
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:32 runtime_log
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc   1587200 Jun  4 05:32 result.tar.gz
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc      8673 Jun  4 05:32 runtime_log.err
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc       656 Jun  4 05:32 gg4KDmQ4fg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW8jKDmSoSxMn.diag
[2025-06-04 05:32:18] -rw-r--r--. 1 boinc boinc     20627 Jun  4 05:32 stderr.txt
[2025-06-04 05:32:18] HITS file was successfully produced:
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc 176855976 Jun  4 05:30 shared/HITS.pool.root.1
[2025-06-04 05:32:18]  *** Contents of shared directory: ***
[2025-06-04 05:32:18] total 383584
[2025-06-04 05:32:18] -rw-r--r--. 2 boinc boinc 213814920 Jun  4 01:38 ATLAS.root_0
[2025-06-04 05:32:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:38 start_atlas.sh
[2025-06-04 05:32:18] -rw-r--r--. 2 boinc boinc    508881 Jun  4 01:38 input.tar.gz
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc 176855976 Jun  4 05:30 HITS.pool.root.1
[2025-06-04 05:32:18] -rw-------. 1 boinc boinc   1587200 Jun  4 05:32 result.tar.gz
05:32:20 (13145): run_atlas exited; CPU time 49188.084508
05:32:20 (13145): called boinc_finish(0)

</stderr_txt>
]]>

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