Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:17:54 (29499): wrapper (7.7.26015): starting
11:17:54 (29499): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:17:54] Arguments: --nthreads 8
[2025-06-03 11:17:54] Threads: 8
[2025-06-03 11:17:54] Checking for CVMFS
[2025-06-03 11:17:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:17:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:17:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:17:54] 2.11.2.0 2952 34412 93544 146748 3 55 14306147 20275201 1 130560 0 11553282 99.959 7011468 8331 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 11:17:54] CVMFS is ok
[2025-06-03 11:17:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:17:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:17:54] Further information can be found at the LHC@home message board.
[2025-06-03 11:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:17:54] Checking for apptainer binary...
[2025-06-03 11:17:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:17:54] Running /usr/bin/apptainer --version
[2025-06-03 11:17:54] apptainer version 1.3.2-1.el7
[2025-06-03 11:17:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:17:56] c-204-35.aglt2.org
[2025-06-03 11:17:56] apptainer works
[2025-06-03 11:17:56] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:17:56] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:17:56] Starting ATLAS job with PandaID=6677617748
[2025-06-03 11:17:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:21:34]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:21:34] 2025-06-03 17:21:18,470 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 13:21:34] 2025-06-03 17:21:18,470 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677617748/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,471 | INFO     | extracted standard info from prmon json
[2025-06-03 13:21:34] 2025-06-03 17:21:18,471 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:21:34] 2025-06-03 17:21:18,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:21:34] 2025-06-03 17:21:18,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:21:34] 2025-06-03 17:21:18,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:21:34] 2025-06-03 17:21:18,474 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:21:34] 2025-06-03 17:21:18,475 | INFO     | sum of square deviations: 549294020.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,475 | INFO     | sum of deviations: -15244535253.999996
[2025-06-03 13:21:34] 2025-06-03 17:21:18,475 | INFO     | mean x: 1748967585.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,476 | INFO     | mean y: 2558670.9338842975
[2025-06-03 13:21:34] 2025-06-03 17:21:18,476 | INFO     | -- intersect: 48541587017.96693
[2025-06-03 13:21:34] 2025-06-03 17:21:18,476 | INFO     | intersect: 48541587017.96693
[2025-06-03 13:21:34] 2025-06-03 17:21:18,476 | INFO     | chi2: 2.4917946451344726
[2025-06-03 13:21:34] 2025-06-03 17:21:18,476 | INFO     | sum of square deviations: 483971865.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,477 | INFO     | sum of deviations: -5675947824.999997
[2025-06-03 13:21:34] 2025-06-03 17:21:18,477 | INFO     | mean x: 1748967432.5
[2025-06-03 13:21:34] 2025-06-03 17:21:18,477 | INFO     | mean y: 2580391.0517241377
[2025-06-03 13:21:34] 2025-06-03 17:21:18,477 | INFO     | -- intersect: 20514202269.10078
[2025-06-03 13:21:34] 2025-06-03 17:21:18,478 | INFO     | intersect: 20514202269.10078
[2025-06-03 13:21:34] 2025-06-03 17:21:18,478 | INFO     | chi2: 1.729163660323351
[2025-06-03 13:21:34] 2025-06-03 17:21:18,478 | INFO     | current chi2=1.729163660323351 (change=30.60569161669281 %)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,478 | INFO     | sum of square deviations: 424045160.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,479 | INFO     | sum of deviations: -4235992255.999996
[2025-06-03 13:21:34] 2025-06-03 17:21:18,479 | INFO     | mean x: 1748967280.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,479 | INFO     | mean y: 2584057.6936936937
[2025-06-03 13:21:34] 2025-06-03 17:21:18,479 | INFO     | -- intersect: 17473864366.79421
[2025-06-03 13:21:34] 2025-06-03 17:21:18,479 | INFO     | intersect: 17473864366.79421
[2025-06-03 13:21:34] 2025-06-03 17:21:18,479 | INFO     | chi2: 1.7319563619663567
[2025-06-03 13:21:34] 2025-06-03 17:21:18,480 | INFO     | current chi2=1.7319563619663567 (change=-0.16150591798138952 %)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,480 | INFO     | right removable region: 110
[2025-06-03 13:21:34] 2025-06-03 17:21:18,480 | INFO     | sum of square deviations: 483971865.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,480 | INFO     | sum of deviations: -34479834071.5
[2025-06-03 13:21:34] 2025-06-03 17:21:18,481 | INFO     | mean x: 1748967737.5
[2025-06-03 13:21:34] 2025-06-03 17:21:18,481 | INFO     | mean y: 2602762.4051724137
[2025-06-03 13:21:34] 2025-06-03 17:21:18,481 | INFO     | -- intersect: 124605129782.04248
[2025-06-03 13:21:34] 2025-06-03 17:21:18,481 | INFO     | intersect: 124605129782.04248
[2025-06-03 13:21:34] 2025-06-03 17:21:18,481 | INFO     | chi2: 0.9233296080131156
[2025-06-03 13:21:34] 2025-06-03 17:21:18,481 | INFO     | current chi2=0.9233296080131156 (change=62.945196554779216 %)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,482 | INFO     | sum of square deviations: 424045160.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,482 | INFO     | sum of deviations: -33528421067.000008
[2025-06-03 13:21:34] 2025-06-03 17:21:18,482 | INFO     | mean x: 1748967890.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,482 | INFO     | mean y: 2600233.09009009
[2025-06-03 13:21:34] 2025-06-03 17:21:18,483 | INFO     | -- intersect: 138290069069.15118
[2025-06-03 13:21:34] 2025-06-03 17:21:18,483 | INFO     | intersect: 138290069069.15118
[2025-06-03 13:21:34] 2025-06-03 17:21:18,483 | INFO     | chi2: 0.898010567265739
[2025-06-03 13:21:34] 2025-06-03 17:21:18,483 | INFO     | current chi2=0.898010567265739 (change=2.742145440549646 %)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,483 | INFO     | left removable region: 20
[2025-06-03 13:21:34] 2025-06-03 17:21:18,483 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 13:21:34] 2025-06-03 17:21:18,484 | INFO     | sum of deviations: -17500808988.0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,484 | INFO     | mean x: 1748967859.5
[2025-06-03 13:21:34] 2025-06-03 17:21:18,484 | INFO     | mean y: 2618717.111111111
[2025-06-03 13:21:34] 2025-06-03 17:21:18,484 | INFO     | -- intersect: 135424119025.2524
[2025-06-03 13:21:34] 2025-06-03 17:21:18,484 | INFO     | intersect: 135424119025.2524
[2025-06-03 13:21:34] 2025-06-03 17:21:18,485 | INFO     | chi2: 0.0794013128836154
[2025-06-03 13:21:34] 2025-06-03 17:21:18,485 | INFO     | -- intersect: 135424119025.2524
[2025-06-03 13:21:34] 2025-06-03 17:21:18,485 | INFO     | current memory leak: -77.43 B/s (using 90 data points, chi2=0.08)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,485 | INFO     | ..............................
[2025-06-03 13:21:34] 2025-06-03 17:21:18,485 | INFO     | . Timing measurements:
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . get job = 0 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . initial setup = 3 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . payload setup = 11 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . stage-in = 0 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . payload execution = 7345 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . stage-out = 0 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | . log creation = 0 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,486 | INFO     | ..............................
[2025-06-03 13:21:34] 2025-06-03 17:21:18,987 | INFO     | 
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | job summary report
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | --------------------------------------------------
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | PanDA job id: 6677617748
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | task id: 45006595
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | errors: (none)
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:21:34] 2025-06-03 17:21:18,988 | INFO     | pilot state: finished 
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | transexitcode: 0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | exeerrorcode: 0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | exeerrordiag: 
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | exitcode: 0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | exitmsg: OK
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | cpuconsumptiontime: 49921 s
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | nevents: 400
[2025-06-03 13:21:34] 2025-06-03 17:21:18,989 | INFO     | neventsw: 0
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | pid: 7456
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | pgrp: 7456
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | corecount: 8
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | event service: False
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 7360: 2432602, 7362: 2441543, 7364: 2441727, 7370: 2441897}
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | --------------------------------------------------
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | 
[2025-06-03 13:21:34] 2025-06-03 17:21:18,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 13:21:34] 2025-06-03 17:21:19,012 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,012 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,012 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,013 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,015 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:21:34] 2025-06-03 17:21:19,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,015 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:21:34] 2025-06-03 17:21:19,015 | INFO     | job 6677617748 has completed (purged errors)
[2025-06-03 13:21:34] 2025-06-03 17:21:19,015 | INFO     | overall cleanup function is called
[2025-06-03 13:21:34] 2025-06-03 17:21:20,022 | INFO     | --- collectZombieJob: --- 10, [7456]
[2025-06-03 13:21:34] 2025-06-03 17:21:20,023 | INFO     | zombie collector waiting for pid 7456
[2025-06-03 13:21:34] 2025-06-03 17:21:20,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:21:34] 2025-06-03 17:21:20,023 | INFO     | collected zombie processes
[2025-06-03 13:21:34] 2025-06-03 17:21:20,023 | INFO     | will attempt to kill all subprocesses of pid=7456
[2025-06-03 13:21:34] 2025-06-03 17:21:20,124 | INFO     | process IDs to be killed: [7456] (in reverse order)
[2025-06-03 13:21:34] 2025-06-03 17:21:20,202 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:21:34] 2025-06-03 17:21:20,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:21:34] 2025-06-03 17:21:20,205 | INFO     | did not find any defunct processes belonging to 7456
[2025-06-03 13:21:34] 2025-06-03 17:21:20,208 | INFO     | did not find any defunct processes belonging to 7456
[2025-06-03 13:21:34] 2025-06-03 17:21:20,209 | INFO     | ready for new job
[2025-06-03 13:21:34] 2025-06-03 17:21:20,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:21:34] 2025-06-03 17:21:20,210 | INFO     | **************************************
[2025-06-03 13:21:34] 2025-06-03 17:21:20,210 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:21:34] 2025-06-03 17:21:20,210 | INFO     | **************************************
[2025-06-03 13:21:34] 2025-06-03 17:21:20,211 | INFO     | 
[2025-06-03 13:21:34] 2025-06-03 17:21:20,211 | INFO     | architecture information:
[2025-06-03 13:21:34] 2025-06-03 17:21:20,212 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:21:34] 2025-06-03 17:21:20,227 | INFO     | cat /etc/os-release:
[2025-06-03 13:21:34] NAME="CentOS Linux"
[2025-06-03 13:21:34] VERSION="7 (Core)"
[2025-06-03 13:21:34] ID="centos"
[2025-06-03 13:21:34] ID_LIKE="rhel fedora"
[2025-06-03 13:21:34] VERSION_ID="7"
[2025-06-03 13:21:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:21:34] ANSI_COLOR="0;31"
[2025-06-03 13:21:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:21:34] HOME_URL="https://www.centos.org/"
[2025-06-03 13:21:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:21:34] 
[2025-06-03 13:21:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:21:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:21:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:21:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:21:34] 
[2025-06-03 13:21:34] 2025-06-03 17:21:20,228 | INFO     | **************************************
[2025-06-03 13:21:34] 2025-06-03 17:21:20,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 13:21:34] 2025-06-03 17:21:20,747 | INFO     | sufficient remaining disk space (18605932544 B)
[2025-06-03 13:21:34] 2025-06-03 17:21:20,748 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:21:34] 2025-06-03 17:21:20,748 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:21:34] 2025-06-03 17:21:20,748 | INFO     | update_server=False
[2025-06-03 13:21:34] 2025-06-03 17:21:20,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:21:34] 2025-06-03 17:21:20,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:21:34] 2025-06-03 17:21:20,749 | INFO     | aborting loop
[2025-06-03 13:21:34] 2025-06-03 17:21:21,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:21:34] 2025-06-03 17:21:21,415 | INFO     | all payload control threads have been joined
[2025-06-03 13:21:34] 2025-06-03 17:21:21,420 | INFO     | all data control threads have been joined
[2025-06-03 13:21:34] 2025-06-03 17:21:21,441 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:21:34] 2025-06-03 17:21:21,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:21:34] 2025-06-03 17:21:21,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:21:34] 2025-06-03 17:21:21,754 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:21,754 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:21,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,345 | INFO     | [job] validate thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,421 | INFO     | [payload] control thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,426 | INFO     | [data] control thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,437 | INFO     | all job control threads have been joined
[2025-06-03 13:21:34] 2025-06-03 17:21:22,539 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,593 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,694 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:22,745 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:23,060 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:23,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:21:34] 2025-06-03 17:21:23,204 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:23,284 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:23,443 | INFO     | [job] control thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:23,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:21:34] 2025-06-03 17:21:24,595 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:27,125 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:21:34] 2025-06-03 17:21:29,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883532044096)>', '<ExcThread(monitor, started 139882487854848)>']
[2025-06-03 13:21:34] 2025-06-03 17:21:29,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:21:34] 2025-06-03 17:21:29,472 | INFO     | [monitor] control thread has ended
[2025-06-03 13:21:34] 2025-06-03 17:21:34,104 | INFO     | all workflow threads have been joined
[2025-06-03 13:21:34] 2025-06-03 17:21:34,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:21:34] 2025-06-03 17:21:34,110 | INFO     | traces error code: 0
[2025-06-03 13:21:34] 2025-06-03 17:21:34,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:21:34] 2025-06-03 17:21:34,211 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:21:34] 2025-06-03 17:21:34,215 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:21:34] 2025-06-03 17:21:34,219 [wrapper] pilotpid: 680
[2025-06-03 13:21:34] 2025-06-03 17:21:34,223 [wrapper] Pilot exit status: 0
[2025-06-03 13:21:34] 2025-06-03 17:21:34,237 [wrapper] pandaids: 6677617748
[2025-06-03 13:21:34] 2025-06-03 17:21:34,285 [wrapper] cleanup supervisor_pilot 16530 681
[2025-06-03 13:21:34] 2025-06-03 17:21:34,290 [wrapper] Test setup, not cleaning
[2025-06-03 13:21:34] 2025-06-03 17:21:34,294 [wrapper] apfmon messages muted
[2025-06-03 13:21:34] 2025-06-03 17:21:34,299 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:21:34] 2025-06-03 17:21:34,303 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:21:34]  *** Error codes and diagnostics ***
[2025-06-03 13:21:34]     "exeErrorCode": 0,
[2025-06-03 13:21:34]     "exeErrorDiag": "",
[2025-06-03 13:21:34]     "pilotErrorCode": 0,
[2025-06-03 13:21:34]     "pilotErrorDiag": "",
[2025-06-03 13:21:34]  *** Listing of results directory ***
[2025-06-03 13:21:34] total 390904
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 08:20 queuedata.json
[2025-06-03 13:21:34] -rwx------ 1 boincer umatlas     37140 Jun  3 08:20 runpilot2-wrapper.sh
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas       100 Jun  3 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:21:34] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 11:17 run_atlas
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas       105 Jun  3 11:17 job.xml
[2025-06-03 13:21:34] -rw-r--r-- 2 boincer umatlas 215434628 Jun  3 11:17 EVNT.45006593._001289.pool.root.1
[2025-06-03 13:21:34] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:17 start_atlas.sh
[2025-06-03 13:21:34] drwxrwx--x 2 boincer umatlas      4096 Jun  3 11:17 shared
[2025-06-03 13:21:34] -rw-r--r-- 2 boincer umatlas    508886 Jun  3 11:17 input.tar.gz
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas         0 Jun  3 11:17 boinc_lockfile
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 11:17 pandaJob.out
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas    983735 Jun  3 11:18 agis_schedconf.cvmfs.json
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas   1603667 Jun  3 11:18 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:21:34] drwx------ 4 boincer umatlas      4096 Jun  3 11:18 pilot3
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas      5904 Jun  3 13:18 init_data.xml
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas 179010599 Jun  3 13:20 HITS.45006595._032025.pool.root.1
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas       529 Jun  3 13:20 boinc_task_state.xml
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas      1060 Jun  3 13:21 memory_monitor_summary.json
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas        95 Jun  3 13:21 pilot_heartbeat.json
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas    326376 Jun  3 13:21 log.45006595._032025.job.log.tgz.1
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas      7765 Jun  3 13:21 heartbeat.json
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 13:21 boinc_mmap_file
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas        27 Jun  3 13:21 wrapper_checkpoint.txt
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas      4353 Jun  3 13:21 pilotlog.txt
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas    675943 Jun  3 13:21 log.45006595._032025.job.log.1
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas       357 Jun  3 13:21 output.list
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas       620 Jun  3 13:21 runtime_log
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas   1024000 Jun  3 13:21 result.tar.gz
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 13:21 runtime_log.err
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas       660 Jun  3 13:21 B3hNDmSofg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkZYKDmjajPan.diag
[2025-06-03 13:21:34] -rw-r--r-- 1 boincer umatlas     20760 Jun  3 13:21 stderr.txt
[2025-06-03 13:21:34] HITS file was successfully produced:
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas 179010599 Jun  3 13:20 shared/HITS.pool.root.1
[2025-06-03 13:21:34]  *** Contents of shared directory: ***
[2025-06-03 13:21:34] total 386724
[2025-06-03 13:21:34] -rw-r--r-- 2 boincer umatlas 215434628 Jun  3 11:17 ATLAS.root_0
[2025-06-03 13:21:34] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:17 start_atlas.sh
[2025-06-03 13:21:34] -rw-r--r-- 2 boincer umatlas    508886 Jun  3 11:17 input.tar.gz
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas 179010599 Jun  3 13:20 HITS.pool.root.1
[2025-06-03 13:21:34] -rw------- 1 boincer umatlas   1024000 Jun  3 13:21 result.tar.gz
13:21:35 (29499): run_atlas exited; CPU time 49783.590092
13:21:35 (29499): called boinc_finish(0)

</stderr_txt>
]]>

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