Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:17:08 (2547487): wrapper (7.7.26015): starting
11:17:08 (2547487): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:17:08] Arguments: --nthreads 8
[2025-06-03 11:17:08] Threads: 8
[2025-06-03 11:17:08] Checking for CVMFS
[2025-06-03 11:17:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:17:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:17:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:17:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:17:09] 2.12.6.0 4122838 22017 427112 146748 2 65 22439613 32935936 4955 16776704 0 61109445 99.621 74451914 33516 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:17:09] CVMFS is ok
[2025-06-03 11:17:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:17:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:17:09] Further information can be found at the LHC@home message board.
[2025-06-03 11:17:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:17:09] Checking for apptainer binary...
[2025-06-03 11:17:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:17:09] Running /usr/bin/apptainer --version
[2025-06-03 11:17:09] apptainer version 1.4.1-1.el9
[2025-06-03 11:17:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:17:09] c6-6-39-3.aglt2.org
[2025-06-03 11:17:09] apptainer works
[2025-06-03 11:17:09] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:17:09] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:17:09] Starting ATLAS job with PandaID=6677618737
[2025-06-03 11:17:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:26:14]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:26:14]  lfn=log.45006595._032452.job.log.tgz.1
[2025-06-03 12:26:14]  mtime=0
[2025-06-03 12:26:14]  protocol_id=None
[2025-06-03 12:26:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 12:26:14]  replicas=None
[2025-06-03 12:26:14]  scope=mc23_13p6TeV
[2025-06-03 12:26:14]  status=None
[2025-06-03 12:26:14]  status_code=0
[2025-06-03 12:26:14]  storage_token=
[2025-06-03 12:26:14]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677618737/log.45006595._032452.job.log.tgz.1
[2025-06-03 12:26:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/11/log.45006595._032452.job.log.tgz.1
[2025-06-03 12:26:14]  workdir=None
[2025-06-03 12:26:14] ]
[2025-06-03 12:26:14] 2025-06-03 16:25:50,466 | INFO     | transferring file log.45006595._032452.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677618737/log.45006595._032452.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 12:26:14] 2025-06-03 16:25:50,467 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677618737/log.45006595._032452.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._032452.job
[2025-06-03 12:26:14] 2025-06-03 16:25:50,479 | INFO     | adding to output.list: log.45006595._032452.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/11/log.45006595._032452.job.log.tg
[2025-06-03 12:26:14] 2025-06-03 16:25:50,480 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 12:26:14] 2025-06-03 16:25:50,480 | INFO     | summary of transferred files:
[2025-06-03 12:26:14] 2025-06-03 16:25:50,481 | INFO     |  -- lfn=log.45006595._032452.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 12:26:14] 2025-06-03 16:25:50,481 | INFO     | stage-out finished correctly
[2025-06-03 12:26:14] 2025-06-03 16:25:50,567 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 12:26:14] 2025-06-03 16:25:50,897 | INFO     | PID=2551573 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 12:26:14] 2025-06-03 16:25:50,897 | INFO     | .. there are 8 such processes running
[2025-06-03 12:26:14] 2025-06-03 16:25:52,533 | INFO     | job 6677618737 has state=finished
[2025-06-03 12:26:14] 2025-06-03 16:25:52,533 | INFO     | preparing for final server update for job 6677618737 in state='finished'
[2025-06-03 12:26:14] 2025-06-03 16:25:52,590 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 12:26:14] 2025-06-03 16:25:52,591 | INFO     | this job has now completed (state=finished)
[2025-06-03 12:26:14] 2025-06-03 16:25:52,591 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:26:14] 2025-06-03 16:25:52,591 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:26:14] 2025-06-03 16:25:52,591 | INFO     | job 6677618737 has finished - writing final server update
[2025-06-03 12:26:14] 2025-06-03 16:25:52,591 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:26:14] 2025-06-03 16:25:52,606 | INFO     | executing command: lscpu
[2025-06-03 12:26:14] 2025-06-03 16:25:52,665 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:26:14] 2025-06-03 16:25:52,713 | INFO     | monitor loop #311: job 0:6677618737 is in state 'finished'
[2025-06-03 12:26:14] 2025-06-03 16:25:52,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,217 | INFO     | monitor loop #312: job 0:6677618737 is in state 'finished'
[2025-06-03 12:26:14] 2025-06-03 16:25:55,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,634 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 12:26:14] 2025-06-03 16:25:55,634 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677618737/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,635 | INFO     | extracted standard info from prmon json
[2025-06-03 12:26:14] 2025-06-03 16:25:55,636 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:26:14] 2025-06-03 16:25:55,636 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:26:14] 2025-06-03 16:25:55,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:26:14] 2025-06-03 16:25:55,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | sum of square deviations: 66959395.0
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | sum of deviations: 2132451938.499999
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | mean x: 1748965962.5
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | mean y: 2305345.683333333
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | -- intersect: -55696911427.46167
[2025-06-03 12:26:14] 2025-06-03 16:25:55,638 | INFO     | intersect: -55696911427.46167
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | chi2: 0.8032922625673129
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | -- intersect: -55696911427.46167
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | current memory leak: 31.85 B/s (using 60 data points, chi2=0.80)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | ..............................
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | . Timing measurements:
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | . get job = 0 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | . initial setup = 2 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,639 | INFO     | . payload setup = 4 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,640 | INFO     | . stage-in = 0 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,640 | INFO     | . payload execution = 4090 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,640 | INFO     | . stage-out = 0 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,640 | INFO     | . log creation = 0 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,640 | INFO     | ..............................
[2025-06-03 12:26:14] 2025-06-03 16:25:55,720 | INFO     | 
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | job summary report
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | --------------------------------------------------
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | PanDA job id: 6677618737
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | task id: 45006595
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | errors: (none)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | pilot state: finished 
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | transexitcode: 0
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | exeerrorcode: 0
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | exeerrordiag: 
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | exitcode: 0
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | exitmsg: OK
[2025-06-03 12:26:14] 2025-06-03 16:25:55,721 | INFO     | cpuconsumptiontime: 27919 s
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | nevents: 400
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | neventsw: 0
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | pid: 2558110
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | pgrp: 2558110
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | corecount: 8
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | event service: False
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 4098: 2431269, 4099: 2431268, 4101: 2440449, 4106: 2440563}
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | --------------------------------------------------
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | 
[2025-06-03 12:26:14] 2025-06-03 16:25:55,722 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 12:26:14] 2025-06-03 16:25:55,736 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | job 6677618737 has completed (purged errors)
[2025-06-03 12:26:14] 2025-06-03 16:25:55,737 | INFO     | overall cleanup function is called
[2025-06-03 12:26:14] 2025-06-03 16:25:56,744 | INFO     | --- collectZombieJob: --- 10, [2558110]
[2025-06-03 12:26:14] 2025-06-03 16:25:56,744 | INFO     | zombie collector waiting for pid 2558110
[2025-06-03 12:26:14] 2025-06-03 16:25:56,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:26:14] 2025-06-03 16:25:56,744 | INFO     | collected zombie processes
[2025-06-03 12:26:14] 2025-06-03 16:25:56,745 | INFO     | will attempt to kill all subprocesses of pid=2558110
[2025-06-03 12:26:14] 2025-06-03 16:25:56,885 | INFO     | process IDs to be killed: [2558110] (in reverse order)
[2025-06-03 12:26:14] 2025-06-03 16:25:56,937 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:26:14] 2025-06-03 16:25:56,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:26:14] 2025-06-03 16:25:56,944 | INFO     | did not find any defunct processes belonging to 2558110
[2025-06-03 12:26:14] 2025-06-03 16:25:56,949 | INFO     | did not find any defunct processes belonging to 2558110
[2025-06-03 12:26:14] 2025-06-03 16:25:56,949 | INFO     | ready for new job
[2025-06-03 12:26:14] 2025-06-03 16:25:56,949 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:26:14] 2025-06-03 16:25:56,950 | INFO     | **************************************
[2025-06-03 12:26:14] 2025-06-03 16:25:56,950 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:26:14] 2025-06-03 16:25:56,950 | INFO     | **************************************
[2025-06-03 12:26:14] 2025-06-03 16:25:56,950 | INFO     | 
[2025-06-03 12:26:14] 2025-06-03 16:25:56,966 | INFO     | architecture information:
[2025-06-03 12:26:14] 2025-06-03 16:25:56,967 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:26:14] 2025-06-03 16:25:56,980 | INFO     | cat /etc/os-release:
[2025-06-03 12:26:14] NAME="CentOS Linux"
[2025-06-03 12:26:14] VERSION="7 (Core)"
[2025-06-03 12:26:14] ID="centos"
[2025-06-03 12:26:14] ID_LIKE="rhel fedora"
[2025-06-03 12:26:14] VERSION_ID="7"
[2025-06-03 12:26:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:26:14] ANSI_COLOR="0;31"
[2025-06-03 12:26:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:26:14] HOME_URL="https://www.centos.org/"
[2025-06-03 12:26:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:26:14] 
[2025-06-03 12:26:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:26:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:26:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:26:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:26:14] 
[2025-06-03 12:26:14] 2025-06-03 16:25:56,981 | INFO     | **************************************
[2025-06-03 12:26:14] 2025-06-03 16:25:57,483 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 12:26:14] 2025-06-03 16:25:57,496 | INFO     | sufficient remaining disk space (73087844352 B)
[2025-06-03 12:26:14] 2025-06-03 16:25:57,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:26:14] 2025-06-03 16:25:57,496 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:26:14] 2025-06-03 16:25:57,497 | INFO     | update_server=False
[2025-06-03 12:26:14] 2025-06-03 16:25:57,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:26:14] 2025-06-03 16:25:57,497 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:26:14] 2025-06-03 16:25:57,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:26:14] 2025-06-03 16:25:57,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:26:14] 2025-06-03 16:25:57,498 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:26:14] 2025-06-03 16:25:57,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:26:14] 2025-06-03 16:25:57,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:26:14] 2025-06-03 16:25:57,719 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 12:26:14] 2025-06-03 16:25:57,719 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 12:26:14] 2025-06-03 16:25:57,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:26:14] 2025-06-03 16:25:57,720 | INFO     | will abort loop
[2025-06-03 12:26:14] 2025-06-03 16:25:58,163 | INFO     | all payload control threads have been joined
[2025-06-03 12:26:14] 2025-06-03 16:25:58,197 | INFO     | all data control threads have been joined
[2025-06-03 12:26:14] 2025-06-03 16:25:58,501 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:58,503 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:58,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:26:14] 2025-06-03 16:25:58,725 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:58,942 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,003 | INFO     | all job control threads have been joined
[2025-06-03 12:26:14] 2025-06-03 16:25:59,168 | INFO     | [payload] control thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,203 | INFO     | [data] control thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,522 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,549 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,646 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,680 | INFO     | [job] validate thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,794 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:25:59,879 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:26:00,008 | INFO     | [job] control thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:26:00,583 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:26:01,504 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:26:08,359 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:26:14] 2025-06-03 16:26:09,364 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:26:14] 2025-06-03 16:26:09,452 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270854494016)>', '<ExcThread(monitor, started 140269915719424)>']
[2025-06-03 12:26:14] 2025-06-03 16:26:09,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:26:14] 2025-06-03 16:26:09,558 | INFO     | [monitor] control thread has ended
[2025-06-03 12:26:14] 2025-06-03 16:26:14,477 | INFO     | all workflow threads have been joined
[2025-06-03 12:26:14] 2025-06-03 16:26:14,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:26:14] 2025-06-03 16:26:14,478 | INFO     | traces error code: 0
[2025-06-03 12:26:14] 2025-06-03 16:26:14,479 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:26:14] 2025-06-03 16:26:14,598 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:26:14] 2025-06-03 16:26:14,600 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:26:14] 2025-06-03 16:26:14,601 [wrapper] pilotpid: 2551573
[2025-06-03 12:26:14] 2025-06-03 16:26:14,603 [wrapper] Pilot exit status: 0
[2025-06-03 12:26:14] 2025-06-03 16:26:14,610 [wrapper] pandaids: 6677618737
[2025-06-03 12:26:14] 2025-06-03 16:26:14,647 [wrapper] cleanup supervisor_pilot 2730694 2551574
[2025-06-03 12:26:14] 2025-06-03 16:26:14,650 [wrapper] Test setup, not cleaning
[2025-06-03 12:26:14] 2025-06-03 16:26:14,652 [wrapper] apfmon messages muted
[2025-06-03 12:26:14] 2025-06-03 16:26:14,654 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:26:14] 2025-06-03 16:26:14,656 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:26:14]  *** Error codes and diagnostics ***
[2025-06-03 12:26:14]     "exeErrorCode": 0,
[2025-06-03 12:26:14]     "exeErrorDiag": "",
[2025-06-03 12:26:14]     "pilotErrorCode": 0,
[2025-06-03 12:26:14]     "pilotErrorDiag": "",
[2025-06-03 12:26:14]  *** Listing of results directory ***
[2025-06-03 12:26:14] total 393672
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:28 queuedata.json
[2025-06-03 12:26:14] -rwx------. 1 boincer umatlas     37140 Jun  3 08:29 runpilot2-wrapper.sh
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:26:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:17 run_atlas
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:17 job.xml
[2025-06-03 12:26:14] -rw-r--r--. 2 boincer umatlas 216521734 Jun  3 11:17 EVNT.45006593._001306.pool.root.1
[2025-06-03 12:26:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:17 start_atlas.sh
[2025-06-03 12:26:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:17 shared
[2025-06-03 12:26:14] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 11:17 input.tar.gz
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:17 boinc_lockfile
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:17 pandaJob.out
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas    983735 Jun  3 11:17 agis_schedconf.cvmfs.json
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:17 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:26:14] drwx------. 4 boincer umatlas      4096 Jun  3 11:17 pilot3
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas      6840 Jun  3 12:19 init_data.xml
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas        95 Jun  3 12:25 pilot_heartbeat.json
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas       529 Jun  3 12:25 boinc_task_state.xml
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas 181330020 Jun  3 12:25 HITS.45006595._032452.pool.root.1
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas      1034 Jun  3 12:25 memory_monitor_summary.json
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas    299373 Jun  3 12:25 log.45006595._032452.job.log.tgz.1
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas      7713 Jun  3 12:25 heartbeat.json
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:26 wrapper_checkpoint.txt
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:26 boinc_mmap_file
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas      4734 Jun  3 12:26 pilotlog.txt
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas    415109 Jun  3 12:26 log.45006595._032452.job.log.1
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas       357 Jun  3 12:26 output.list
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:26 runtime_log
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas    737280 Jun  3 12:26 result.tar.gz
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas      8664 Jun  3 12:26 runtime_log.err
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas       651 Jun  3 12:26 3KmNDmRwfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm34jKDmW5qPsn.diag
[2025-06-03 12:26:14] -rw-r--r--. 1 boincer umatlas     21624 Jun  3 12:26 stderr.txt
[2025-06-03 12:26:14] HITS file was successfully produced:
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas 181330020 Jun  3 12:25 shared/HITS.pool.root.1
[2025-06-03 12:26:14]  *** Contents of shared directory: ***
[2025-06-03 12:26:14] total 389772
[2025-06-03 12:26:14] -rw-r--r--. 2 boincer umatlas 216521734 Jun  3 11:17 ATLAS.root_0
[2025-06-03 12:26:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:17 start_atlas.sh
[2025-06-03 12:26:14] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 11:17 input.tar.gz
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas 181330020 Jun  3 12:25 HITS.pool.root.1
[2025-06-03 12:26:14] -rw-------. 1 boincer umatlas    737280 Jun  3 12:26 result.tar.gz
12:26:16 (2547487): run_atlas exited; CPU time 27998.988698
12:26:16 (2547487): called boinc_finish(0)

</stderr_txt>
]]>

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