Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:15:51 (1081479): wrapper (7.7.26015): starting
11:15:51 (1081479): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:15:51] Arguments: --nthreads 8
[2025-06-03 11:15:51] Threads: 8
[2025-06-03 11:15:51] Checking for CVMFS
[2025-06-03 11:15:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:15:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:15:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:15:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:15:52] 2.12.6.0 814677 89370 878564 146746 3 197 16951154 21551105 4128 16776704 1 293213264 99.328 535798199 27515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:15:52] CVMFS is ok
[2025-06-03 11:15:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:15:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:15:52] Further information can be found at the LHC@home message board.
[2025-06-03 11:15:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:15:52] Checking for apptainer binary...
[2025-06-03 11:15:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:15:52] Running /usr/bin/apptainer --version
[2025-06-03 11:15:52] apptainer version 1.4.1-1.el9
[2025-06-03 11:15:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:15:52] c-16-30.aglt2.org
[2025-06-03 11:15:52] apptainer works
[2025-06-03 11:15:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:15:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:15:52] Starting ATLAS job with PandaID=6677618780
[2025-06-03 11:15:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:40:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:40:55] 2025-06-03 17:40:34,933 | INFO     | -- intersect: -72816678420.01042
[2025-06-03 13:40:55] 2025-06-03 17:40:34,933 | INFO     | intersect: -72816678420.01042
[2025-06-03 13:40:55] 2025-06-03 17:40:34,934 | INFO     | chi2: 4.244981351687741
[2025-06-03 13:40:55] 2025-06-03 17:40:34,934 | INFO     | sum of square deviations: 797291228.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,935 | INFO     | sum of deviations: 37561375920.999985
[2025-06-03 13:40:55] 2025-06-03 17:40:34,935 | INFO     | mean x: 1748967940.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,936 | INFO     | mean y: 2005594.0291970803
[2025-06-03 13:40:55] 2025-06-03 17:40:34,936 | INFO     | -- intersect: -82394037358.6934
[2025-06-03 13:40:55] 2025-06-03 17:40:34,936 | INFO     | intersect: -82394037358.6934
[2025-06-03 13:40:55] 2025-06-03 17:40:34,936 | INFO     | chi2: 4.220985689322501
[2025-06-03 13:40:55] 2025-06-03 17:40:34,936 | INFO     | current chi2=4.220985689322501 (change=0.5652713257668349 %)
[2025-06-03 13:40:55] 2025-06-03 17:40:34,937 | INFO     | right removable region: 136
[2025-06-03 13:40:55] 2025-06-03 17:40:34,937 | INFO     | sum of square deviations: 797291228.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,938 | INFO     | sum of deviations: 7087581948.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,938 | INFO     | mean x: 1748968245.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,938 | INFO     | mean y: 2054828.2773722627
[2025-06-03 13:40:55] 2025-06-03 17:40:34,938 | INFO     | -- intersect: -15545533462.619066
[2025-06-03 13:40:55] 2025-06-03 17:40:34,939 | INFO     | intersect: -15545533462.619066
[2025-06-03 13:40:55] 2025-06-03 17:40:34,939 | INFO     | chi2: 1.4419263294625981
[2025-06-03 13:40:55] 2025-06-03 17:40:34,939 | INFO     | current chi2=1.4419263294625981 (change=66.03221050925679 %)
[2025-06-03 13:40:55] 2025-06-03 17:40:34,940 | INFO     | sum of square deviations: 713140813.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,940 | INFO     | sum of deviations: -12642616488.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,941 | INFO     | mean x: 1748968397.5
[2025-06-03 13:40:55] 2025-06-03 17:40:34,941 | INFO     | mean y: 2090496.0454545454
[2025-06-03 13:40:55] 2025-06-03 17:40:34,941 | INFO     | -- intersect: 31007939966.652653
[2025-06-03 13:40:55] 2025-06-03 17:40:34,941 | INFO     | intersect: 31007939966.652653
[2025-06-03 13:40:55] 2025-06-03 17:40:34,941 | INFO     | chi2: 0.2350354349473566
[2025-06-03 13:40:55] 2025-06-03 17:40:34,942 | INFO     | current chi2=0.2350354349473566 (change=83.69989990855125 %)
[2025-06-03 13:40:55] 2025-06-03 17:40:34,942 | INFO     | sum of square deviations: 635130048.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,943 | INFO     | sum of deviations: -14420637900.000002
[2025-06-03 13:40:55] 2025-06-03 17:40:34,943 | INFO     | mean x: 1748968550.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,943 | INFO     | mean y: 2093834.1732283465
[2025-06-03 13:40:55] 2025-06-03 17:40:34,943 | INFO     | -- intersect: 39712452740.13078
[2025-06-03 13:40:55] 2025-06-03 17:40:34,944 | INFO     | intersect: 39712452740.13078
[2025-06-03 13:40:55] 2025-06-03 17:40:34,944 | INFO     | chi2: 0.17209582353606223
[2025-06-03 13:40:55] 2025-06-03 17:40:34,944 | INFO     | current chi2=0.17209582353606223 (change=26.778775475022147 %)
[2025-06-03 13:40:55] 2025-06-03 17:40:34,944 | INFO     | sum of square deviations: 563026370.5
[2025-06-03 13:40:55] 2025-06-03 17:40:34,945 | INFO     | sum of deviations: -12907175958.500002
[2025-06-03 13:40:55] 2025-06-03 17:40:34,945 | INFO     | mean x: 1748968702.5
[2025-06-03 13:40:55] 2025-06-03 17:40:34,946 | INFO     | mean y: 2090606.9262295081
[2025-06-03 13:40:55] 2025-06-03 17:40:34,946 | INFO     | -- intersect: 40096565700.570076
[2025-06-03 13:40:55] 2025-06-03 17:40:34,946 | INFO     | intersect: 40096565700.570076
[2025-06-03 13:40:55] 2025-06-03 17:40:34,946 | INFO     | chi2: 0.16991833119471064
[2025-06-03 13:40:55] 2025-06-03 17:40:34,946 | INFO     | current chi2=0.16991833119471064 (change=1.2652790152663416 %)
[2025-06-03 13:40:55] 2025-06-03 17:40:34,947 | INFO     | left removable region: 40
[2025-06-03 13:40:55] 2025-06-03 17:40:34,947 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,948 | INFO     | sum of deviations: -5951462377.0
[2025-06-03 13:40:55] 2025-06-03 17:40:34,948 | INFO     | mean x: 1748969129.5
[2025-06-03 13:40:55] 2025-06-03 17:40:34,948 | INFO     | mean y: 2083469.5
[2025-06-03 13:40:55] 2025-06-03 17:40:34,948 | INFO     | -- intersect: 37947632403.88063
[2025-06-03 13:40:55] 2025-06-03 17:40:34,948 | INFO     | intersect: 37947632403.88063
[2025-06-03 13:40:55] 2025-06-03 17:40:34,949 | INFO     | chi2: 0.14065857120775294
[2025-06-03 13:40:55] 2025-06-03 17:40:34,949 | INFO     | -- intersect: 37947632403.88063
[2025-06-03 13:40:55] 2025-06-03 17:40:34,949 | INFO     | current memory leak: -21.70 B/s (using 96 data points, chi2=0.14)
[2025-06-03 13:40:55] 2025-06-03 17:40:34,949 | INFO     | ..............................
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . Timing measurements:
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . get job = 0 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . initial setup = 3 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . payload setup = 7 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . stage-in = 0 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . payload execution = 8637 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,950 | INFO     | . stage-out = 0 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,951 | INFO     | . log creation = 0 s
[2025-06-03 13:40:55] 2025-06-03 17:40:34,951 | INFO     | ..............................
[2025-06-03 13:40:55] 2025-06-03 17:40:35,102 | INFO     | 
[2025-06-03 13:40:55] 2025-06-03 17:40:35,102 | INFO     | job summary report
[2025-06-03 13:40:55] 2025-06-03 17:40:35,103 | INFO     | --------------------------------------------------
[2025-06-03 13:40:55] 2025-06-03 17:40:35,103 | INFO     | PanDA job id: 6677618780
[2025-06-03 13:40:55] 2025-06-03 17:40:35,103 | INFO     | task id: 45006595
[2025-06-03 13:40:55] 2025-06-03 17:40:35,103 | INFO     | errors: (none)
[2025-06-03 13:40:55] 2025-06-03 17:40:35,103 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:40:55] 2025-06-03 17:40:35,103 | INFO     | pilot state: finished 
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | transexitcode: 0
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | exeerrorcode: 0
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | exeerrordiag: 
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | exitcode: 0
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | exitmsg: OK
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | cpuconsumptiontime: 61617 s
[2025-06-03 13:40:55] 2025-06-03 17:40:35,104 | INFO     | nevents: 400
[2025-06-03 13:40:55] 2025-06-03 17:40:35,105 | INFO     | neventsw: 0
[2025-06-03 13:40:55] 2025-06-03 17:40:35,105 | INFO     | pid: 1093120
[2025-06-03 13:40:55] 2025-06-03 17:40:35,105 | INFO     | pgrp: 1093120
[2025-06-03 13:40:55] 2025-06-03 17:40:35,105 | INFO     | corecount: 8
[2025-06-03 13:40:55] 2025-06-03 17:40:35,105 | INFO     | event service: False
[2025-06-03 13:40:55] 2025-06-03 17:40:35,105 | INFO     | sizes: {0: 2405024, 1: 2405223, 5: 2405429, 12: 2405485, 8648: 2433134, 8649: 2442097, 8650: 2442281, 8655: 2442451}
[2025-06-03 13:40:55] 2025-06-03 17:40:35,106 | INFO     | --------------------------------------------------
[2025-06-03 13:40:55] 2025-06-03 17:40:35,106 | INFO     | 
[2025-06-03 13:40:55] 2025-06-03 17:40:35,106 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/3
[2025-06-03 13:40:55] 2025-06-03 17:40:35,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,125 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:40:55] 2025-06-03 17:40:35,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:40:55] 2025-06-03 17:40:35,127 | INFO     | job 6677618780 has completed (purged errors)
[2025-06-03 13:40:55] 2025-06-03 17:40:35,128 | INFO     | overall cleanup function is called
[2025-06-03 13:40:55] 2025-06-03 17:40:36,133 | INFO     | --- collectZombieJob: --- 10, [1093120]
[2025-06-03 13:40:55] 2025-06-03 17:40:36,133 | INFO     | zombie collector waiting for pid 1093120
[2025-06-03 13:40:55] 2025-06-03 17:40:36,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:40:55] 2025-06-03 17:40:36,133 | INFO     | collected zombie processes
[2025-06-03 13:40:55] 2025-06-03 17:40:36,133 | INFO     | will attempt to kill all subprocesses of pid=1093120
[2025-06-03 13:40:55] 2025-06-03 17:40:36,489 | INFO     | process IDs to be killed: [1093120] (in reverse order)
[2025-06-03 13:40:55] 2025-06-03 17:40:36,580 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:40:55] 2025-06-03 17:40:36,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:40:55] 2025-06-03 17:40:36,625 | INFO     | did not find any defunct processes belonging to 1093120
[2025-06-03 13:40:55] 2025-06-03 17:40:36,662 | INFO     | did not find any defunct processes belonging to 1093120
[2025-06-03 13:40:55] 2025-06-03 17:40:36,662 | INFO     | ready for new job
[2025-06-03 13:40:55] 2025-06-03 17:40:36,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:40:55] 2025-06-03 17:40:36,665 | INFO     | **************************************
[2025-06-03 13:40:55] 2025-06-03 17:40:36,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:40:55] 2025-06-03 17:40:36,665 | INFO     | **************************************
[2025-06-03 13:40:55] 2025-06-03 17:40:36,666 | INFO     | 
[2025-06-03 13:40:55] 2025-06-03 17:40:36,680 | INFO     | architecture information:
[2025-06-03 13:40:55] 2025-06-03 17:40:36,680 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:40:55] 2025-06-03 17:40:36,693 | INFO     | cat /etc/os-release:
[2025-06-03 13:40:55] NAME="CentOS Linux"
[2025-06-03 13:40:55] VERSION="7 (Core)"
[2025-06-03 13:40:55] ID="centos"
[2025-06-03 13:40:55] ID_LIKE="rhel fedora"
[2025-06-03 13:40:55] VERSION_ID="7"
[2025-06-03 13:40:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:40:55] ANSI_COLOR="0;31"
[2025-06-03 13:40:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:40:55] HOME_URL="https://www.centos.org/"
[2025-06-03 13:40:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:40:55] 
[2025-06-03 13:40:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:40:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:40:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:40:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:40:55] 
[2025-06-03 13:40:55] 2025-06-03 17:40:36,694 | INFO     | **************************************
[2025-06-03 13:40:55] 2025-06-03 17:40:36,838 | INFO     | PID=1085218 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 13:40:55] 2025-06-03 17:40:36,838 | INFO     | .. there are 7 such processes running
[2025-06-03 13:40:55] 2025-06-03 17:40:37,199 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/3
[2025-06-03 13:40:55] 2025-06-03 17:40:37,216 | INFO     | sufficient remaining disk space (1861621907456 B)
[2025-06-03 13:40:55] 2025-06-03 17:40:37,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:40:55] 2025-06-03 17:40:37,217 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:40:55] 2025-06-03 17:40:37,217 | INFO     | update_server=False
[2025-06-03 13:40:55] 2025-06-03 17:40:37,217 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:40:55] 2025-06-03 17:40:37,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:40:55] 2025-06-03 17:40:37,218 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 13:40:55] 2025-06-03 17:40:37,218 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:40:55] 2025-06-03 17:40:37,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:40:55] 2025-06-03 17:40:37,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:40:55] 2025-06-03 17:40:37,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:40:55] 2025-06-03 17:40:37,219 | INFO     | aborting loop
[2025-06-03 13:40:55] 2025-06-03 17:40:37,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:40:55] 2025-06-03 17:40:37,765 | INFO     | all data control threads have been joined
[2025-06-03 13:40:55] 2025-06-03 17:40:38,218 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,224 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,418 | INFO     | [job] validate thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,433 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,568 | INFO     | all payload control threads have been joined
[2025-06-03 13:40:55] 2025-06-03 17:40:38,770 | INFO     | [data] control thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,829 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,860 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:38,861 | INFO     | all job control threads have been joined
[2025-06-03 13:40:55] 2025-06-03 17:40:39,349 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:39,365 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:39,368 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:39,399 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:39,574 | INFO     | [payload] control thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:39,866 | INFO     | [job] control thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:40,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:40:55] 2025-06-03 17:40:41,118 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:41,224 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:47,803 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:40:55] 2025-06-03 17:40:48,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:40:55] 2025-06-03 17:40:50,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432869394240)>', '<ExcThread(monitor, started 140432361101056)>']
[2025-06-03 13:40:55] 2025-06-03 17:40:51,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:40:55] 2025-06-03 17:40:51,281 | INFO     | [monitor] control thread has ended
[2025-06-03 13:40:55] 2025-06-03 17:40:55,612 | INFO     | all workflow threads have been joined
[2025-06-03 13:40:55] 2025-06-03 17:40:55,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:40:55] 2025-06-03 17:40:55,613 | INFO     | traces error code: 0
[2025-06-03 13:40:55] 2025-06-03 17:40:55,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:40:55] 2025-06-03 17:40:55,731 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:40:55] 2025-06-03 17:40:55,734 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:40:55] 2025-06-03 17:40:55,736 [wrapper] pilotpid: 1085218
[2025-06-03 13:40:55] 2025-06-03 17:40:55,739 [wrapper] Pilot exit status: 0
[2025-06-03 13:40:55] 2025-06-03 17:40:55,749 [wrapper] pandaids: 6677618780
[2025-06-03 13:40:55] 2025-06-03 17:40:55,808 [wrapper] cleanup supervisor_pilot 1396810 1085219
[2025-06-03 13:40:55] 2025-06-03 17:40:55,811 [wrapper] Test setup, not cleaning
[2025-06-03 13:40:55] 2025-06-03 17:40:55,814 [wrapper] apfmon messages muted
[2025-06-03 13:40:55] 2025-06-03 17:40:55,816 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:40:55] 2025-06-03 17:40:55,819 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:40:55]  *** Error codes and diagnostics ***
[2025-06-03 13:40:55]     "exeErrorCode": 0,
[2025-06-03 13:40:55]     "exeErrorDiag": "",
[2025-06-03 13:40:55]     "pilotErrorCode": 0,
[2025-06-03 13:40:55]     "pilotErrorDiag": "",
[2025-06-03 13:40:55]  *** Listing of results directory ***
[2025-06-03 13:40:55] total 393912
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:28 queuedata.json
[2025-06-03 13:40:55] -rwx------. 1 boincer umatlas     37140 Jun  3 08:29 runpilot2-wrapper.sh
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:40:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:15 run_atlas
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:15 job.xml
[2025-06-03 13:40:55] -rw-r--r--. 2 boincer umatlas 215319735 Jun  3 11:15 EVNT.45006593._001308.pool.root.1
[2025-06-03 13:40:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:15 start_atlas.sh
[2025-06-03 13:40:55] drwxrwx--x. 2 boincer umatlas        68 Jun  3 11:15 shared
[2025-06-03 13:40:55] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 11:15 input.tar.gz
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:15 boinc_lockfile
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:15 pandaJob.out
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas    982716 Jun  3 11:16 agis_schedconf.cvmfs.json
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:16 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:40:55] drwx------. 4 boincer umatlas      4096 Jun  3 11:16 pilot3
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas      6549 Jun  3 13:37 init_data.xml
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas 181911803 Jun  3 13:39 HITS.45006595._032495.pool.root.1
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:40 boinc_task_state.xml
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas        95 Jun  3 13:40 pilot_heartbeat.json
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas      1033 Jun  3 13:40 memory_monitor_summary.json
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas    333349 Jun  3 13:40 log.45006595._032495.job.log.tgz.1
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:40 boinc_mmap_file
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:40 wrapper_checkpoint.txt
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas      7704 Jun  3 13:40 heartbeat.json
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas      4956 Jun  3 13:40 pilotlog.txt
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas    822342 Jun  3 13:40 log.45006595._032495.job.log.1
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas       357 Jun  3 13:40 output.list
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:40 runtime_log
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas   1177600 Jun  3 13:40 result.tar.gz
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas      8808 Jun  3 13:40 runtime_log.err
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas       652 Jun  3 13:40 563NDmOxfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX5jKDmFEY2Rm.diag
[2025-06-03 13:40:55] -rw-r--r--. 1 boincer umatlas     20935 Jun  3 13:40 stderr.txt
[2025-06-03 13:40:55] HITS file was successfully produced:
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas 181911803 Jun  3 13:39 shared/HITS.pool.root.1
[2025-06-03 13:40:55]  *** Contents of shared directory: ***
[2025-06-03 13:40:55] total 389596
[2025-06-03 13:40:55] -rw-r--r--. 2 boincer umatlas 215319735 Jun  3 11:15 ATLAS.root_0
[2025-06-03 13:40:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:15 start_atlas.sh
[2025-06-03 13:40:55] -rw-r--r--. 2 boincer umatlas    508884 Jun  3 11:15 input.tar.gz
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas 181911803 Jun  3 13:39 HITS.pool.root.1
[2025-06-03 13:40:55] -rw-------. 1 boincer umatlas   1177600 Jun  3 13:40 result.tar.gz
13:40:57 (1081479): run_atlas exited; CPU time 61945.663620
13:40:57 (1081479): called boinc_finish(0)

</stderr_txt>
]]>

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