Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:14:18 (19168): wrapper (7.7.26015): starting
11:14:18 (19168): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:14:18] Arguments: --nthreads 8
[2025-06-03 11:14:18] Threads: 8
[2025-06-03 11:14:18] Checking for CVMFS
[2025-06-03 11:14:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:14:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:14:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:14:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:14:19] 2.11.2.0 2871 7259 67952 146746 3 56 16298192 20275200 1 130560 0 1872436 99.983 971738 47110 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 11:14:19] CVMFS is ok
[2025-06-03 11:14:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:14:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:14:19] Further information can be found at the LHC@home message board.
[2025-06-03 11:14:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:14:19] Checking for apptainer binary...
[2025-06-03 11:14:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:14:19] Running /usr/bin/apptainer --version
[2025-06-03 11:14:19] apptainer version 1.3.2-1.el7
[2025-06-03 11:14:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:14:20] c-115-7.aglt2.org
[2025-06-03 11:14:20] apptainer works
[2025-06-03 11:14:20] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:14:20] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:14:20] Starting ATLAS job with PandaID=6677616842
[2025-06-03 11:14:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:52:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:52:24]  filesize=309253
[2025-06-03 12:52:24]  filetype=log
[2025-06-03 12:52:24]  guid=714d7805-6301-4cb1-97c8-01cb8e31761c
[2025-06-03 12:52:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 12:52:24]  is_altstaged=None
[2025-06-03 12:52:24]  is_tar=False
[2025-06-03 12:52:24]  lfn=log.45006595._031673.job.log.tgz.1
[2025-06-03 12:52:24]  mtime=0
[2025-06-03 12:52:24]  protocol_id=None
[2025-06-03 12:52:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 12:52:24]  replicas=None
[2025-06-03 12:52:24]  scope=mc23_13p6TeV
[2025-06-03 12:52:24]  status=None
[2025-06-03 12:52:24]  status_code=0
[2025-06-03 12:52:24]  storage_token=
[2025-06-03 12:52:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677616842/log.45006595._031673.job.log.tgz.1
[2025-06-03 12:52:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/13/log.45006595._031673.job.log.tgz.1
[2025-06-03 12:52:24]  workdir=None
[2025-06-03 12:52:24] ]
[2025-06-03 12:52:24] 2025-06-03 16:51:58,016 | INFO     | transferring file log.45006595._031673.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677616842/log.45006595._031673.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 12:52:24] 2025-06-03 16:51:58,016 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677616842/log.45006595._031673.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._031673.job
[2025-06-03 12:52:24] 2025-06-03 16:51:58,042 | INFO     | adding to output.list: log.45006595._031673.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/13/log.45006595._031673.job.log.tg
[2025-06-03 12:52:24] 2025-06-03 16:51:58,043 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 12:52:24] 2025-06-03 16:51:58,044 | INFO     | summary of transferred files:
[2025-06-03 12:52:24] 2025-06-03 16:51:58,044 | INFO     |  -- lfn=log.45006595._031673.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 12:52:24] 2025-06-03 16:51:58,044 | INFO     | stage-out finished correctly
[2025-06-03 12:52:24] 2025-06-03 16:51:58,240 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 12:52:24] 2025-06-03 16:51:58,321 | INFO     | job 6677616842 has state=finished
[2025-06-03 12:52:24] 2025-06-03 16:51:58,322 | INFO     | preparing for final server update for job 6677616842 in state='finished'
[2025-06-03 12:52:24] 2025-06-03 16:51:58,323 | INFO     | this job has now completed (state=finished)
[2025-06-03 12:52:24] 2025-06-03 16:51:58,323 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:52:24] 2025-06-03 16:51:58,323 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:52:24] 2025-06-03 16:51:58,323 | INFO     | job 6677616842 has finished - writing final server update
[2025-06-03 12:52:24] 2025-06-03 16:51:58,324 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:52:24] 2025-06-03 16:51:58,325 | INFO     | executing command: lscpu
[2025-06-03 12:52:24] 2025-06-03 16:51:58,354 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:52:24] 2025-06-03 16:52:00,178 | INFO     | monitor loop #433: job 0:6677616842 is in state 'finished'
[2025-06-03 12:52:24] 2025-06-03 16:52:00,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:52:24] 2025-06-03 16:52:02,681 | INFO     | monitor loop #434: job 0:6677616842 is in state 'finished'
[2025-06-03 12:52:24] 2025-06-03 16:52:02,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:52:24] 2025-06-03 16:52:03,779 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 12:52:24] 2025-06-03 16:52:03,780 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677616842/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:52:24] 2025-06-03 16:52:03,781 | INFO     | extracted standard info from prmon json
[2025-06-03 12:52:24] 2025-06-03 16:52:03,781 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:52:24] 2025-06-03 16:52:03,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:52:24] 2025-06-03 16:52:03,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:52:24] 2025-06-03 16:52:03,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:52:24] 2025-06-03 16:52:03,783 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:52:24] 2025-06-03 16:52:03,784 | INFO     | sum of square deviations: 218571540.0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,784 | INFO     | sum of deviations: -1655938696.0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,784 | INFO     | mean x: 1748966697.0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,784 | INFO     | mean y: 2558730.808988764
[2025-06-03 12:52:24] 2025-06-03 16:52:03,784 | INFO     | -- intersect: 13253056172.413725
[2025-06-03 12:52:24] 2025-06-03 16:52:03,784 | INFO     | intersect: 13253056172.413725
[2025-06-03 12:52:24] 2025-06-03 16:52:03,785 | INFO     | chi2: 0.032438658923683555
[2025-06-03 12:52:24] 2025-06-03 16:52:03,785 | INFO     | -- intersect: 13253056172.413725
[2025-06-03 12:52:24] 2025-06-03 16:52:03,785 | INFO     | current memory leak: -7.58 B/s (using 89 data points, chi2=0.03)
[2025-06-03 12:52:24] 2025-06-03 16:52:03,785 | INFO     | ..............................
[2025-06-03 12:52:24] 2025-06-03 16:52:03,785 | INFO     | . Timing measurements:
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . get job = 0 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . initial setup = 2 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . payload setup = 11 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . stage-in = 0 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . payload execution = 5809 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . stage-out = 0 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | . log creation = 0 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,786 | INFO     | ..............................
[2025-06-03 12:52:24] 2025-06-03 16:52:03,872 | INFO     | 
[2025-06-03 12:52:24] 2025-06-03 16:52:03,872 | INFO     | job summary report
[2025-06-03 12:52:24] 2025-06-03 16:52:03,872 | INFO     | --------------------------------------------------
[2025-06-03 12:52:24] 2025-06-03 16:52:03,873 | INFO     | PanDA job id: 6677616842
[2025-06-03 12:52:24] 2025-06-03 16:52:03,873 | INFO     | task id: 45006595
[2025-06-03 12:52:24] 2025-06-03 16:52:03,873 | INFO     | errors: (none)
[2025-06-03 12:52:24] 2025-06-03 16:52:03,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:52:24] 2025-06-03 16:52:03,873 | INFO     | pilot state: finished 
[2025-06-03 12:52:24] 2025-06-03 16:52:03,873 | INFO     | transexitcode: 0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,874 | INFO     | exeerrorcode: 0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,874 | INFO     | exeerrordiag: 
[2025-06-03 12:52:24] 2025-06-03 16:52:03,874 | INFO     | exitcode: 0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,874 | INFO     | exitmsg: OK
[2025-06-03 12:52:24] 2025-06-03 16:52:03,874 | INFO     | cpuconsumptiontime: 43366 s
[2025-06-03 12:52:24] 2025-06-03 16:52:03,874 | INFO     | nevents: 400
[2025-06-03 12:52:24] 2025-06-03 16:52:03,875 | INFO     | neventsw: 0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,875 | INFO     | pid: 30147
[2025-06-03 12:52:24] 2025-06-03 16:52:03,875 | INFO     | pgrp: 30147
[2025-06-03 12:52:24] 2025-06-03 16:52:03,875 | INFO     | corecount: 8
[2025-06-03 12:52:24] 2025-06-03 16:52:03,875 | INFO     | event service: False
[2025-06-03 12:52:24] 2025-06-03 16:52:03,875 | INFO     | sizes: {0: 2405184, 6: 2405390, 11: 2405418, 5824: 2431939, 5825: 2431938, 5826: 2441119, 5832: 2441233}
[2025-06-03 12:52:24] 2025-06-03 16:52:03,876 | INFO     | --------------------------------------------------
[2025-06-03 12:52:24] 2025-06-03 16:52:03,876 | INFO     | 
[2025-06-03 12:52:24] 2025-06-03 16:52:03,876 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 12:52:24] 2025-06-03 16:52:03,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:52:24] 2025-06-03 16:52:03,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,908 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:52:24] 2025-06-03 16:52:03,908 | INFO     | job 6677616842 has completed (purged errors)
[2025-06-03 12:52:24] 2025-06-03 16:52:03,908 | INFO     | overall cleanup function is called
[2025-06-03 12:52:24] 2025-06-03 16:52:04,916 | INFO     | --- collectZombieJob: --- 10, [30147]
[2025-06-03 12:52:24] 2025-06-03 16:52:04,916 | INFO     | zombie collector waiting for pid 30147
[2025-06-03 12:52:24] 2025-06-03 16:52:04,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:52:24] 2025-06-03 16:52:04,923 | INFO     | collected zombie processes
[2025-06-03 12:52:24] 2025-06-03 16:52:04,923 | INFO     | will attempt to kill all subprocesses of pid=30147
[2025-06-03 12:52:24] 2025-06-03 16:52:05,005 | INFO     | process IDs to be killed: [30147] (in reverse order)
[2025-06-03 12:52:24] 2025-06-03 16:52:05,057 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:52:24] 2025-06-03 16:52:05,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:52:24] 2025-06-03 16:52:05,061 | INFO     | did not find any defunct processes belonging to 30147
[2025-06-03 12:52:24] 2025-06-03 16:52:05,063 | INFO     | did not find any defunct processes belonging to 30147
[2025-06-03 12:52:24] 2025-06-03 16:52:05,064 | INFO     | ready for new job
[2025-06-03 12:52:24] 2025-06-03 16:52:05,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:52:24] 2025-06-03 16:52:05,065 | INFO     | **************************************
[2025-06-03 12:52:24] 2025-06-03 16:52:05,065 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:52:24] 2025-06-03 16:52:05,065 | INFO     | **************************************
[2025-06-03 12:52:24] 2025-06-03 16:52:05,065 | INFO     | 
[2025-06-03 12:52:24] 2025-06-03 16:52:05,066 | INFO     | architecture information:
[2025-06-03 12:52:24] 2025-06-03 16:52:05,066 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:52:24] 2025-06-03 16:52:05,085 | INFO     | cat /etc/os-release:
[2025-06-03 12:52:24] NAME="CentOS Linux"
[2025-06-03 12:52:24] VERSION="7 (Core)"
[2025-06-03 12:52:24] ID="centos"
[2025-06-03 12:52:24] ID_LIKE="rhel fedora"
[2025-06-03 12:52:24] VERSION_ID="7"
[2025-06-03 12:52:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:52:24] ANSI_COLOR="0;31"
[2025-06-03 12:52:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:52:24] HOME_URL="https://www.centos.org/"
[2025-06-03 12:52:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:52:24] 
[2025-06-03 12:52:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:52:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:52:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:52:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:52:24] 
[2025-06-03 12:52:24] 2025-06-03 16:52:05,085 | INFO     | **************************************
[2025-06-03 12:52:24] 2025-06-03 16:52:05,588 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 12:52:24] 2025-06-03 16:52:05,609 | INFO     | sufficient remaining disk space (18648924160 B)
[2025-06-03 12:52:24] 2025-06-03 16:52:05,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:52:24] 2025-06-03 16:52:05,610 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:52:24] 2025-06-03 16:52:05,610 | INFO     | update_server=False
[2025-06-03 12:52:24] 2025-06-03 16:52:05,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:52:24] 2025-06-03 16:52:05,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:52:24] 2025-06-03 16:52:05,755 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:52:24] 2025-06-03 16:52:05,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:52:24] 2025-06-03 16:52:05,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:52:24] 2025-06-03 16:52:06,087 | INFO     | all data control threads have been joined
[2025-06-03 12:52:24] 2025-06-03 16:52:06,114 | INFO     | all payload control threads have been joined
[2025-06-03 12:52:24] 2025-06-03 16:52:06,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:52:24] 2025-06-03 16:52:06,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:52:24] 2025-06-03 16:52:06,190 | INFO     | aborting loop
[2025-06-03 12:52:24] 2025-06-03 16:52:06,458 | INFO     | all job control threads have been joined
[2025-06-03 12:52:24] 2025-06-03 16:52:06,611 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:06,616 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:06,798 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,093 | INFO     | [data] control thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,120 | INFO     | [payload] control thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,195 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,411 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,464 | INFO     | [job] control thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,478 | INFO     | [job] validate thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,665 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,668 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,670 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:07,935 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:08,147 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:08,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:52:24] 2025-06-03 16:52:12,842 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:15,783 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:52:24] 2025-06-03 16:52:16,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:52:24] 2025-06-03 16:52:18,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205404096320)>', '<ExcThread(monitor, started 140204283250432)>']
[2025-06-03 12:52:24] 2025-06-03 16:52:19,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:52:24] 2025-06-03 16:52:19,812 | INFO     | [monitor] control thread has ended
[2025-06-03 12:52:24] 2025-06-03 16:52:23,859 | INFO     | all workflow threads have been joined
[2025-06-03 12:52:24] 2025-06-03 16:52:23,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:52:24] 2025-06-03 16:52:23,864 | INFO     | traces error code: 0
[2025-06-03 12:52:24] 2025-06-03 16:52:23,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:52:24] 2025-06-03 16:52:23,959 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:52:24] 2025-06-03 16:52:23,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:52:24] 2025-06-03 16:52:23,969 [wrapper] pilotpid: 22759
[2025-06-03 12:52:24] 2025-06-03 16:52:23,974 [wrapper] Pilot exit status: 0
[2025-06-03 12:52:24] 2025-06-03 16:52:23,991 [wrapper] pandaids: 6677616842
[2025-06-03 12:52:24] 2025-06-03 16:52:24,034 [wrapper] cleanup supervisor_pilot 15308 22760
[2025-06-03 12:52:24] 2025-06-03 16:52:24,040 [wrapper] Test setup, not cleaning
[2025-06-03 12:52:24] 2025-06-03 16:52:24,045 [wrapper] apfmon messages muted
[2025-06-03 12:52:24] 2025-06-03 16:52:24,050 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:52:24] 2025-06-03 16:52:24,055 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:52:24]  *** Error codes and diagnostics ***
[2025-06-03 12:52:24]     "exeErrorCode": 0,
[2025-06-03 12:52:24]     "exeErrorDiag": "",
[2025-06-03 12:52:24]     "pilotErrorCode": 0,
[2025-06-03 12:52:24]     "pilotErrorDiag": "",
[2025-06-03 12:52:24]  *** Listing of results directory ***
[2025-06-03 12:52:24] total 388232
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 08:06 queuedata.json
[2025-06-03 12:52:24] -rwx------ 1 boincer umatlas     37140 Jun  3 08:07 runpilot2-wrapper.sh
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas       100 Jun  3 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:52:24] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 11:14 run_atlas
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas       105 Jun  3 11:14 job.xml
[2025-06-03 12:52:24] -rw-r--r-- 2 boincer umatlas 213290313 Jun  3 11:14 EVNT.45006593._001275.pool.root.1
[2025-06-03 12:52:24] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:14 start_atlas.sh
[2025-06-03 12:52:24] drwxrwx--x 2 boincer umatlas      4096 Jun  3 11:14 shared
[2025-06-03 12:52:24] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 11:14 input.tar.gz
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas         0 Jun  3 11:14 boinc_lockfile
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 11:14 pandaJob.out
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas    982716 Jun  3 11:14 agis_schedconf.cvmfs.json
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas   1603667 Jun  3 11:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:52:24] drwx------ 4 boincer umatlas      4096 Jun  3 11:14 pilot3
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas      5823 Jun  3 12:49 init_data.xml
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas 178730497 Jun  3 12:51 HITS.45006595._031673.pool.root.1
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas       529 Jun  3 12:51 boinc_task_state.xml
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas        95 Jun  3 12:51 pilot_heartbeat.json
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas      1051 Jun  3 12:51 memory_monitor_summary.json
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas    309253 Jun  3 12:51 log.45006595._031673.job.log.tgz.1
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas      7745 Jun  3 12:52 heartbeat.json
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 12:52 boinc_mmap_file
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas        27 Jun  3 12:52 wrapper_checkpoint.txt
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas      4425 Jun  3 12:52 pilotlog.txt
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas    543950 Jun  3 12:52 log.45006595._031673.job.log.1
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas       357 Jun  3 12:52 output.list
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas       620 Jun  3 12:52 runtime_log
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas    870400 Jun  3 12:52 result.tar.gz
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas       657 Jun  3 12:52 WF0LDmQbfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFxjKDmdFgQUm.diag
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 12:52 runtime_log.err
[2025-06-03 12:52:24] -rw-r--r-- 1 boincer umatlas     21060 Jun  3 12:52 stderr.txt
[2025-06-03 12:52:24] HITS file was successfully produced:
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas 178730497 Jun  3 12:51 shared/HITS.pool.root.1
[2025-06-03 12:52:24]  *** Contents of shared directory: ***
[2025-06-03 12:52:24] total 384204
[2025-06-03 12:52:24] -rw-r--r-- 2 boincer umatlas 213290313 Jun  3 11:14 ATLAS.root_0
[2025-06-03 12:52:24] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 11:14 start_atlas.sh
[2025-06-03 12:52:24] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 11:14 input.tar.gz
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas 178730497 Jun  3 12:51 HITS.pool.root.1
[2025-06-03 12:52:24] -rw------- 1 boincer umatlas    870400 Jun  3 12:52 result.tar.gz
12:52:25 (19168): run_atlas exited; CPU time 43353.306235
12:52:25 (19168): called boinc_finish(0)

</stderr_txt>
]]>

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