Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:29 (1719875): wrapper (7.7.26015): starting
11:13:29 (1719875): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:13:29] Arguments: --nthreads 8
[2025-06-03 11:13:29] Threads: 8
[2025-06-03 11:13:29] Checking for CVMFS
[2025-06-03 11:13:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:13:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:13:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:13:29] 2.12.6.0 956287 147006 212992 146746 3 132 18530111 32935937 2904 130560 0 382332046 99.654 358330363 26170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:13:29] CVMFS is ok
[2025-06-03 11:13:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:13:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:13:29] Further information can be found at the LHC@home message board.
[2025-06-03 11:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:13:29] Checking for apptainer binary...
[2025-06-03 11:13:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:13:29] Running /usr/bin/apptainer --version
[2025-06-03 11:13:29] apptainer version 1.4.1-1.el9
[2025-06-03 11:13:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:13:29] c-6-4.aglt2.org
[2025-06-03 11:13:29] apptainer works
[2025-06-03 11:13:29] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:13:29] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:13:29] Starting ATLAS job with PandaID=6677618707
[2025-06-03 11:13:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:49:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:49:24]  lfn=log.45006595._032422.job.log.tgz.1
[2025-06-03 12:49:24]  mtime=0
[2025-06-03 12:49:24]  protocol_id=None
[2025-06-03 12:49:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 12:49:24]  replicas=None
[2025-06-03 12:49:24]  scope=mc23_13p6TeV
[2025-06-03 12:49:24]  status=None
[2025-06-03 12:49:24]  status_code=0
[2025-06-03 12:49:24]  storage_token=
[2025-06-03 12:49:24]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6677618707/log.45006595._032422.job.log.tgz.1
[2025-06-03 12:49:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/cd/log.45006595._032422.job.log.tgz.1
[2025-06-03 12:49:24]  workdir=None
[2025-06-03 12:49:24] ]
[2025-06-03 12:49:24] 2025-06-03 16:48:55,736 | INFO     | transferring file log.45006595._032422.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6677618707/log.45006595._032422.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 12:49:24] 2025-06-03 16:48:55,736 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6677618707/log.45006595._032422.job.log.tgz.1 /tmp/boinchome/slots/4/log.45006595._032422.job
[2025-06-03 12:49:24] 2025-06-03 16:48:55,752 | INFO     | adding to output.list: log.45006595._032422.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/cd/log.45006595._032422.job.log.tg
[2025-06-03 12:49:24] 2025-06-03 16:48:55,753 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 12:49:24] 2025-06-03 16:48:55,753 | INFO     | summary of transferred files:
[2025-06-03 12:49:24] 2025-06-03 16:48:55,753 | INFO     |  -- lfn=log.45006595._032422.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 12:49:24] 2025-06-03 16:48:55,753 | INFO     | stage-out finished correctly
[2025-06-03 12:49:24] 2025-06-03 16:48:57,351 | INFO     | monitor loop #425: job 0:6677618707 is in state 'finished'
[2025-06-03 12:49:24] 2025-06-03 16:48:57,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:49:24] 2025-06-03 16:48:59,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 12:49:24] 2025-06-03 16:48:59,860 | INFO     | monitor loop #426: job 0:6677618707 is in state 'finished'
[2025-06-03 12:49:24] 2025-06-03 16:48:59,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:49:24] 2025-06-03 16:49:00,997 | INFO     | job 6677618707 has state=finished
[2025-06-03 12:49:24] 2025-06-03 16:49:00,997 | INFO     | preparing for final server update for job 6677618707 in state='finished'
[2025-06-03 12:49:24] 2025-06-03 16:49:01,060 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 12:49:24] 2025-06-03 16:49:01,060 | INFO     | this job has now completed (state=finished)
[2025-06-03 12:49:24] 2025-06-03 16:49:01,060 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:49:24] 2025-06-03 16:49:01,060 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:49:24] 2025-06-03 16:49:01,061 | INFO     | job 6677618707 has finished - writing final server update
[2025-06-03 12:49:24] 2025-06-03 16:49:01,061 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:49:24] 2025-06-03 16:49:01,075 | INFO     | executing command: lscpu
[2025-06-03 12:49:24] 2025-06-03 16:49:01,131 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:49:24] 2025-06-03 16:49:01,925 | INFO     | PID=1723551 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 12:49:24] 2025-06-03 16:49:01,925 | INFO     | .. there are 5 such processes running
[2025-06-03 12:49:24] 2025-06-03 16:49:02,363 | INFO     | monitor loop #427: job 0:6677618707 is in state 'finished'
[2025-06-03 12:49:24] 2025-06-03 16:49:02,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:49:24] 2025-06-03 16:49:04,402 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 12:49:24] 2025-06-03 16:49:04,402 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6677618707/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:49:24] 2025-06-03 16:49:04,403 | INFO     | extracted standard info from prmon json
[2025-06-03 12:49:24] 2025-06-03 16:49:04,403 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:49:24] 2025-06-03 16:49:04,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:49:24] 2025-06-03 16:49:04,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:49:24] 2025-06-03 16:49:04,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:49:24] 2025-06-03 16:49:04,406 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:49:24] 2025-06-03 16:49:04,407 | INFO     | sum of square deviations: 204163828.0
[2025-06-03 12:49:24] 2025-06-03 16:49:04,407 | INFO     | sum of deviations: 6290214897.000002
[2025-06-03 12:49:24] 2025-06-03 16:49:04,407 | INFO     | mean x: 1748966572.0
[2025-06-03 12:49:24] 2025-06-03 16:49:04,407 | INFO     | mean y: 2074852.5402298851
[2025-06-03 12:49:24] 2025-06-03 16:49:04,407 | INFO     | -- intersect: -53882962929.71289
[2025-06-03 12:49:24] 2025-06-03 16:49:04,408 | INFO     | intersect: -53882962929.71289
[2025-06-03 12:49:24] 2025-06-03 16:49:04,408 | INFO     | chi2: 1.4498476700136476
[2025-06-03 12:49:24] 2025-06-03 16:49:04,408 | INFO     | -- intersect: -53882962929.71289
[2025-06-03 12:49:24] 2025-06-03 16:49:04,408 | INFO     | current memory leak: 30.81 B/s (using 87 data points, chi2=1.45)
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | ..............................
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . Timing measurements:
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . get job = 0 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . initial setup = 2 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . payload setup = 5 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . stage-in = 0 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . payload execution = 5691 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . stage-out = 0 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,409 | INFO     | . log creation = 0 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,410 | INFO     | ..............................
[2025-06-03 12:49:24] 2025-06-03 16:49:04,909 | INFO     | 
[2025-06-03 12:49:24] 2025-06-03 16:49:04,909 | INFO     | job summary report
[2025-06-03 12:49:24] 2025-06-03 16:49:04,909 | INFO     | --------------------------------------------------
[2025-06-03 12:49:24] 2025-06-03 16:49:04,909 | INFO     | PanDA job id: 6677618707
[2025-06-03 12:49:24] 2025-06-03 16:49:04,909 | INFO     | task id: 45006595
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | errors: (none)
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | pilot state: finished 
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | transexitcode: 0
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | exeerrorcode: 0
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | exeerrordiag: 
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | exitcode: 0
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | exitmsg: OK
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | cpuconsumptiontime: 37055 s
[2025-06-03 12:49:24] 2025-06-03 16:49:04,910 | INFO     | nevents: 400
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | neventsw: 0
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | pid: 1732987
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | pgrp: 1732987
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | corecount: 8
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | event service: False
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 5701: 2432018, 5702: 2440959, 5705: 2441143, 5710: 2441313}
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | --------------------------------------------------
[2025-06-03 12:49:24] 2025-06-03 16:49:04,911 | INFO     | 
[2025-06-03 12:49:24] 2025-06-03 16:49:04,912 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 12:49:24] 2025-06-03 16:49:04,928 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:49:24] 2025-06-03 16:49:04,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,931 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:49:24] 2025-06-03 16:49:04,931 | INFO     | job 6677618707 has completed (purged errors)
[2025-06-03 12:49:24] 2025-06-03 16:49:04,931 | INFO     | overall cleanup function is called
[2025-06-03 12:49:24] 2025-06-03 16:49:05,939 | INFO     | --- collectZombieJob: --- 10, [1732987]
[2025-06-03 12:49:24] 2025-06-03 16:49:05,939 | INFO     | zombie collector waiting for pid 1732987
[2025-06-03 12:49:24] 2025-06-03 16:49:05,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:49:24] 2025-06-03 16:49:05,940 | INFO     | collected zombie processes
[2025-06-03 12:49:24] 2025-06-03 16:49:05,940 | INFO     | will attempt to kill all subprocesses of pid=1732987
[2025-06-03 12:49:24] 2025-06-03 16:49:06,203 | INFO     | process IDs to be killed: [1732987] (in reverse order)
[2025-06-03 12:49:24] 2025-06-03 16:49:06,273 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:49:24] 2025-06-03 16:49:06,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:49:24] 2025-06-03 16:49:06,281 | INFO     | did not find any defunct processes belonging to 1732987
[2025-06-03 12:49:24] 2025-06-03 16:49:06,288 | INFO     | did not find any defunct processes belonging to 1732987
[2025-06-03 12:49:24] 2025-06-03 16:49:06,288 | INFO     | ready for new job
[2025-06-03 12:49:24] 2025-06-03 16:49:06,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:49:24] 2025-06-03 16:49:06,290 | INFO     | **************************************
[2025-06-03 12:49:24] 2025-06-03 16:49:06,290 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:49:24] 2025-06-03 16:49:06,290 | INFO     | **************************************
[2025-06-03 12:49:24] 2025-06-03 16:49:06,290 | INFO     | 
[2025-06-03 12:49:24] 2025-06-03 16:49:06,304 | INFO     | architecture information:
[2025-06-03 12:49:24] 2025-06-03 16:49:06,304 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:49:24] 2025-06-03 16:49:06,317 | INFO     | cat /etc/os-release:
[2025-06-03 12:49:24] NAME="CentOS Linux"
[2025-06-03 12:49:24] VERSION="7 (Core)"
[2025-06-03 12:49:24] ID="centos"
[2025-06-03 12:49:24] ID_LIKE="rhel fedora"
[2025-06-03 12:49:24] VERSION_ID="7"
[2025-06-03 12:49:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:49:24] ANSI_COLOR="0;31"
[2025-06-03 12:49:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:49:24] HOME_URL="https://www.centos.org/"
[2025-06-03 12:49:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:49:24] 
[2025-06-03 12:49:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:49:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:49:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:49:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:49:24] 
[2025-06-03 12:49:24] 2025-06-03 16:49:06,318 | INFO     | **************************************
[2025-06-03 12:49:24] 2025-06-03 16:49:06,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 12:49:24] 2025-06-03 16:49:06,834 | INFO     | sufficient remaining disk space (74221355008 B)
[2025-06-03 12:49:24] 2025-06-03 16:49:06,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:49:24] 2025-06-03 16:49:06,835 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:49:24] 2025-06-03 16:49:06,835 | INFO     | update_server=False
[2025-06-03 12:49:24] 2025-06-03 16:49:06,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:49:24] 2025-06-03 16:49:06,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:49:24] 2025-06-03 16:49:06,836 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:49:24] 2025-06-03 16:49:06,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:49:24] 2025-06-03 16:49:06,836 | INFO     | aborting loop
[2025-06-03 12:49:24] 2025-06-03 16:49:06,836 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:49:24] 2025-06-03 16:49:06,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:49:24] 2025-06-03 16:49:06,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:49:24] 2025-06-03 16:49:07,371 | INFO     | all job control threads have been joined
[2025-06-03 12:49:24] 2025-06-03 16:49:07,563 | INFO     | all data control threads have been joined
[2025-06-03 12:49:24] 2025-06-03 16:49:07,841 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:07,842 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:07,961 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:07,965 | INFO     | all payload control threads have been joined
[2025-06-03 12:49:24] 2025-06-03 16:49:08,106 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:08,375 | INFO     | [job] control thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:08,468 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:08,568 | INFO     | [data] control thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:08,747 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:08,842 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:08,970 | INFO     | [payload] control thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:09,043 | INFO     | [job] validate thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:09,188 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:09,238 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:09,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:49:24] 2025-06-03 16:49:09,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:49:24] 2025-06-03 16:49:10,525 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:13,939 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:17,811 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:49:24] 2025-06-03 16:49:18,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:49:24] 2025-06-03 16:49:18,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221922285376)>', '<ExcThread(monitor, started 140221572159232)>']
[2025-06-03 12:49:24] 2025-06-03 16:49:19,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:49:24] 2025-06-03 16:49:19,893 | INFO     | [monitor] control thread has ended
[2025-06-03 12:49:24] 2025-06-03 16:49:23,932 | INFO     | all workflow threads have been joined
[2025-06-03 12:49:24] 2025-06-03 16:49:23,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:49:24] 2025-06-03 16:49:23,933 | INFO     | traces error code: 0
[2025-06-03 12:49:24] 2025-06-03 16:49:23,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:49:24] 2025-06-03 16:49:24,044 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:49:24] 2025-06-03 16:49:24,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:49:24] 2025-06-03 16:49:24,049 [wrapper] pilotpid: 1723551
[2025-06-03 12:49:24] 2025-06-03 16:49:24,052 [wrapper] Pilot exit status: 0
[2025-06-03 12:49:24] 2025-06-03 16:49:24,060 [wrapper] pandaids: 6677618707
[2025-06-03 12:49:24] 2025-06-03 16:49:24,109 [wrapper] cleanup supervisor_pilot 1964096 1723552
[2025-06-03 12:49:24] 2025-06-03 16:49:24,112 [wrapper] Test setup, not cleaning
[2025-06-03 12:49:24] 2025-06-03 16:49:24,114 [wrapper] apfmon messages muted
[2025-06-03 12:49:24] 2025-06-03 16:49:24,116 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:49:24] 2025-06-03 16:49:24,119 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:49:24]  *** Error codes and diagnostics ***
[2025-06-03 12:49:24]     "exeErrorCode": 0,
[2025-06-03 12:49:24]     "exeErrorDiag": "",
[2025-06-03 12:49:24]     "pilotErrorCode": 0,
[2025-06-03 12:49:24]     "pilotErrorDiag": "",
[2025-06-03 12:49:24]  *** Listing of results directory ***
[2025-06-03 12:49:24] total 385824
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:28 queuedata.json
[2025-06-03 12:49:24] -rwx------. 1 boincer umatlas     37140 Jun  3 08:29 runpilot2-wrapper.sh
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:49:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:13 run_atlas
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:13 job.xml
[2025-06-03 12:49:24] -rw-r--r--. 2 boincer umatlas 215427981 Jun  3 11:13 EVNT.45006593._001305.pool.root.1
[2025-06-03 12:49:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:13 start_atlas.sh
[2025-06-03 12:49:24] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:13 shared
[2025-06-03 12:49:24] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 11:13 input.tar.gz
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:13 boinc_lockfile
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:13 pandaJob.out
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas    982716 Jun  3 11:13 agis_schedconf.cvmfs.json
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:49:24] drwx------. 4 boincer umatlas      4096 Jun  3 11:13 pilot3
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 12:45 init_data.xml
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas       529 Jun  3 12:48 boinc_task_state.xml
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas 174102600 Jun  3 12:48 HITS.45006595._032422.pool.root.1
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas        95 Jun  3 12:48 pilot_heartbeat.json
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas      1032 Jun  3 12:48 memory_monitor_summary.json
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas    307204 Jun  3 12:48 log.45006595._032422.job.log.tgz.1
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas      7707 Jun  3 12:49 heartbeat.json
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:49 boinc_mmap_file
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:49 wrapper_checkpoint.txt
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas      4548 Jun  3 12:49 pilotlog.txt
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas    555889 Jun  3 12:49 log.45006595._032422.job.log.1
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas       357 Jun  3 12:49 output.list
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:49 runtime_log
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas    880640 Jun  3 12:49 result.tar.gz
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 12:49 runtime_log.err
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas       649 Jun  3 12:49 EU6MDmRwfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma4jKDmF8wg1m.diag
[2025-06-03 12:49:24] -rw-r--r--. 1 boincer umatlas     21662 Jun  3 12:49 stderr.txt
[2025-06-03 12:49:24] HITS file was successfully produced:
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas 174102600 Jun  3 12:48 shared/HITS.pool.root.1
[2025-06-03 12:49:24]  *** Contents of shared directory: ***
[2025-06-03 12:49:24] total 381784
[2025-06-03 12:49:24] -rw-r--r--. 2 boincer umatlas 215427981 Jun  3 11:13 ATLAS.root_0
[2025-06-03 12:49:24] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:13 start_atlas.sh
[2025-06-03 12:49:24] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 11:13 input.tar.gz
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas 174102600 Jun  3 12:48 HITS.pool.root.1
[2025-06-03 12:49:24] -rw-------. 1 boincer umatlas    880640 Jun  3 12:49 result.tar.gz
12:49:25 (1719875): run_atlas exited; CPU time 37216.655505
12:49:25 (1719875): called boinc_finish(0)

</stderr_txt>
]]>

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