Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:11:04 (1909753): wrapper (7.7.26015): starting
11:11:04 (1909753): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:11:04] Arguments: --nthreads 8
[2025-06-03 11:11:04] Threads: 8
[2025-06-03 11:11:04] Checking for CVMFS
[2025-06-03 11:11:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:11:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:11:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:11:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:11:05] 2.12.6.0 907015 32101 403672 146746 3 195 19612952 25181185 5534 16776704 1 126394297 99.463 164293377 23019 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:11:05] CVMFS is ok
[2025-06-03 11:11:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:11:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:11:05] Further information can be found at the LHC@home message board.
[2025-06-03 11:11:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:11:05] Checking for apptainer binary...
[2025-06-03 11:11:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:11:05] Running /usr/bin/apptainer --version
[2025-06-03 11:11:05] apptainer version 1.4.1-1.el9
[2025-06-03 11:11:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:11:05] c-16-38.aglt2.org
[2025-06-03 11:11:05] apptainer works
[2025-06-03 11:11:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:11:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:11:05] Starting ATLAS job with PandaID=6677617953
[2025-06-03 11:11:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:54:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:54:40] 2025-06-03 16:54:19,904 | INFO     | -- intersect: -192574107360.27414
[2025-06-03 12:54:40] 2025-06-03 16:54:19,904 | INFO     | intersect: -192574107360.27414
[2025-06-03 12:54:40] 2025-06-03 16:54:19,905 | INFO     | chi2: 3.875765596550793
[2025-06-03 12:54:40] 2025-06-03 16:54:19,905 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,906 | INFO     | sum of deviations: 34342697043.5
[2025-06-03 12:54:40] 2025-06-03 16:54:19,906 | INFO     | mean x: 1748966398.5
[2025-06-03 12:54:40] 2025-06-03 16:54:19,906 | INFO     | mean y: 2051288.6770833333
[2025-06-03 12:54:40] 2025-06-03 16:54:19,906 | INFO     | -- intersect: -218961015902.61868
[2025-06-03 12:54:40] 2025-06-03 16:54:19,906 | INFO     | intersect: -218961015902.61868
[2025-06-03 12:54:40] 2025-06-03 16:54:19,906 | INFO     | chi2: 3.8295372855958223
[2025-06-03 12:54:40] 2025-06-03 16:54:19,907 | INFO     | current chi2=3.8295372855958223 (change=1.1927530136526145 %)
[2025-06-03 12:54:40] 2025-06-03 16:54:19,907 | INFO     | right removable region: 95
[2025-06-03 12:54:40] 2025-06-03 16:54:19,907 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | sum of deviations: 13994456703.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | mean x: 1748966703.5
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | mean y: 2125383.625
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | -- intersect: -89224113716.27109
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | intersect: -89224113716.27109
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | chi2: 1.306898045667019
[2025-06-03 12:54:40] 2025-06-03 16:54:19,908 | INFO     | current chi2=1.306898045667019 (change=66.28026094173283 %)
[2025-06-03 12:54:40] 2025-06-03 16:54:19,909 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,909 | INFO     | sum of deviations: -803034073.0000002
[2025-06-03 12:54:40] 2025-06-03 16:54:19,909 | INFO     | mean x: 1748966856.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,909 | INFO     | mean y: 2180665.945054945
[2025-06-03 12:54:40] 2025-06-03 16:54:19,910 | INFO     | -- intersect: 6013439097.783689
[2025-06-03 12:54:40] 2025-06-03 16:54:19,910 | INFO     | intersect: 6013439097.783689
[2025-06-03 12:54:40] 2025-06-03 16:54:19,910 | INFO     | chi2: 0.08173876786456483
[2025-06-03 12:54:40] 2025-06-03 16:54:19,910 | INFO     | current chi2=0.08173876786456483 (change=93.7455895556989 %)
[2025-06-03 12:54:40] 2025-06-03 16:54:19,910 | INFO     | sum of square deviations: 197203697.5
[2025-06-03 12:54:40] 2025-06-03 16:54:19,911 | INFO     | sum of deviations: -2936266445.5000005
[2025-06-03 12:54:40] 2025-06-03 16:54:19,911 | INFO     | mean x: 1748967008.5
[2025-06-03 12:54:40] 2025-06-03 16:54:19,911 | INFO     | mean y: 2189346.1279069767
[2025-06-03 12:54:40] 2025-06-03 16:54:19,911 | INFO     | -- intersect: 26043451282.127174
[2025-06-03 12:54:40] 2025-06-03 16:54:19,911 | INFO     | intersect: 26043451282.127174
[2025-06-03 12:54:40] 2025-06-03 16:54:19,912 | INFO     | chi2: 0.01895700046190654
[2025-06-03 12:54:40] 2025-06-03 16:54:19,912 | INFO     | current chi2=0.01895700046190654 (change=76.80782209328515 %)
[2025-06-03 12:54:40] 2025-06-03 16:54:19,912 | INFO     | sum of square deviations: 164765880.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,912 | INFO     | sum of deviations: -2543979319.0000005
[2025-06-03 12:54:40] 2025-06-03 16:54:19,913 | INFO     | mean x: 1748967161.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,913 | INFO     | mean y: 2187515.6790123456
[2025-06-03 12:54:40] 2025-06-03 16:54:19,913 | INFO     | -- intersect: 27006178191.382893
[2025-06-03 12:54:40] 2025-06-03 16:54:19,913 | INFO     | intersect: 27006178191.382893
[2025-06-03 12:54:40] 2025-06-03 16:54:19,913 | INFO     | chi2: 0.017560141275098654
[2025-06-03 12:54:40] 2025-06-03 16:54:19,913 | INFO     | current chi2=0.017560141275098654 (change=7.36856650721103 %)
[2025-06-03 12:54:40] 2025-06-03 16:54:19,914 | INFO     | left removable region: 40
[2025-06-03 12:54:40] 2025-06-03 16:54:19,914 | INFO     | sum of square deviations: 51573060.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,914 | INFO     | sum of deviations: -579070437.9999999
[2025-06-03 12:54:40] 2025-06-03 16:54:19,914 | INFO     | mean x: 1748967588.0
[2025-06-03 12:54:40] 2025-06-03 16:54:19,914 | INFO     | mean y: 2184902.309090909
[2025-06-03 12:54:40] 2025-06-03 16:54:19,915 | INFO     | -- intersect: 19639868360.12531
[2025-06-03 12:54:40] 2025-06-03 16:54:19,915 | INFO     | intersect: 19639868360.12531
[2025-06-03 12:54:40] 2025-06-03 16:54:19,915 | INFO     | chi2: 0.00583872797054579
[2025-06-03 12:54:40] 2025-06-03 16:54:19,915 | INFO     | -- intersect: 19639868360.12531
[2025-06-03 12:54:40] 2025-06-03 16:54:19,915 | INFO     | current memory leak: -11.23 B/s (using 55 data points, chi2=0.01)
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | ..............................
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | . Timing measurements:
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | . get job = 0 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | . initial setup = 2 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | . payload setup = 6 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | . stage-in = 0 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,916 | INFO     | . payload execution = 6152 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,917 | INFO     | . stage-out = 0 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,917 | INFO     | . log creation = 0 s
[2025-06-03 12:54:40] 2025-06-03 16:54:19,917 | INFO     | ..............................
[2025-06-03 12:54:40] 2025-06-03 16:54:20,029 | INFO     | 
[2025-06-03 12:54:40] 2025-06-03 16:54:20,030 | INFO     | job summary report
[2025-06-03 12:54:40] 2025-06-03 16:54:20,030 | INFO     | --------------------------------------------------
[2025-06-03 12:54:40] 2025-06-03 16:54:20,030 | INFO     | PanDA job id: 6677617953
[2025-06-03 12:54:40] 2025-06-03 16:54:20,030 | INFO     | task id: 45006595
[2025-06-03 12:54:40] 2025-06-03 16:54:20,030 | INFO     | errors: (none)
[2025-06-03 12:54:40] 2025-06-03 16:54:20,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | pilot state: finished 
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | transexitcode: 0
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | exeerrorcode: 0
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | exeerrordiag: 
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | exitcode: 0
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | exitmsg: OK
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | cpuconsumptiontime: 41917 s
[2025-06-03 12:54:40] 2025-06-03 16:54:20,031 | INFO     | nevents: 400
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | neventsw: 0
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | pid: 1920470
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | pgrp: 1920470
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | corecount: 8
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | event service: False
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 6161: 2432400, 6162: 2441525, 6169: 2441639}
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | --------------------------------------------------
[2025-06-03 12:54:40] 2025-06-03 16:54:20,032 | INFO     | 
[2025-06-03 12:54:40] 2025-06-03 16:54:20,033 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 12:54:40] 2025-06-03 16:54:20,050 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,050 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:54:40] 2025-06-03 16:54:20,052 | INFO     | job 6677617953 has completed (purged errors)
[2025-06-03 12:54:40] 2025-06-03 16:54:20,053 | INFO     | overall cleanup function is called
[2025-06-03 12:54:40] 2025-06-03 16:54:21,061 | INFO     | --- collectZombieJob: --- 10, [1920470]
[2025-06-03 12:54:40] 2025-06-03 16:54:21,061 | INFO     | zombie collector waiting for pid 1920470
[2025-06-03 12:54:40] 2025-06-03 16:54:21,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:54:40] 2025-06-03 16:54:21,062 | INFO     | collected zombie processes
[2025-06-03 12:54:40] 2025-06-03 16:54:21,062 | INFO     | will attempt to kill all subprocesses of pid=1920470
[2025-06-03 12:54:40] 2025-06-03 16:54:21,220 | INFO     | PID=1913356 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 12:54:40] 2025-06-03 16:54:21,276 | INFO     | .. there are 6 such processes running
[2025-06-03 12:54:40] 2025-06-03 16:54:21,423 | INFO     | process IDs to be killed: [1920470] (in reverse order)
[2025-06-03 12:54:40] 2025-06-03 16:54:21,470 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:54:40] 2025-06-03 16:54:21,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:54:40] 2025-06-03 16:54:21,479 | INFO     | did not find any defunct processes belonging to 1920470
[2025-06-03 12:54:40] 2025-06-03 16:54:21,487 | INFO     | did not find any defunct processes belonging to 1920470
[2025-06-03 12:54:40] 2025-06-03 16:54:21,488 | INFO     | ready for new job
[2025-06-03 12:54:40] 2025-06-03 16:54:21,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:54:40] 2025-06-03 16:54:21,490 | INFO     | **************************************
[2025-06-03 12:54:40] 2025-06-03 16:54:21,490 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:54:40] 2025-06-03 16:54:21,490 | INFO     | **************************************
[2025-06-03 12:54:40] 2025-06-03 16:54:21,490 | INFO     | 
[2025-06-03 12:54:40] 2025-06-03 16:54:21,505 | INFO     | architecture information:
[2025-06-03 12:54:40] 2025-06-03 16:54:21,505 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:54:40] 2025-06-03 16:54:21,514 | INFO     | cat /etc/os-release:
[2025-06-03 12:54:40] NAME="CentOS Linux"
[2025-06-03 12:54:40] VERSION="7 (Core)"
[2025-06-03 12:54:40] ID="centos"
[2025-06-03 12:54:40] ID_LIKE="rhel fedora"
[2025-06-03 12:54:40] VERSION_ID="7"
[2025-06-03 12:54:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:54:40] ANSI_COLOR="0;31"
[2025-06-03 12:54:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:54:40] HOME_URL="https://www.centos.org/"
[2025-06-03 12:54:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:54:40] 
[2025-06-03 12:54:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:54:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:54:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:54:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:54:40] 
[2025-06-03 12:54:40] 2025-06-03 16:54:21,515 | INFO     | **************************************
[2025-06-03 12:54:40] 2025-06-03 16:54:22,018 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 12:54:40] 2025-06-03 16:54:22,031 | INFO     | sufficient remaining disk space (61875421184 B)
[2025-06-03 12:54:40] 2025-06-03 16:54:22,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:54:40] 2025-06-03 16:54:22,031 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:54:40] 2025-06-03 16:54:22,032 | INFO     | update_server=False
[2025-06-03 12:54:40] 2025-06-03 16:54:22,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:54:40] 2025-06-03 16:54:22,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:54:40] 2025-06-03 16:54:22,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:54:40] 2025-06-03 16:54:22,032 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:54:40] 2025-06-03 16:54:22,033 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:54:40] 2025-06-03 16:54:22,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:54:40] 2025-06-03 16:54:22,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:54:40] 2025-06-03 16:54:22,183 | INFO     | all payload control threads have been joined
[2025-06-03 12:54:40] 2025-06-03 16:54:22,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:54:40] 2025-06-03 16:54:22,274 | INFO     | aborting loop
[2025-06-03 12:54:40] 2025-06-03 16:54:22,379 | INFO     | all job control threads have been joined
[2025-06-03 12:54:40] 2025-06-03 16:54:22,998 | INFO     | all data control threads have been joined
[2025-06-03 12:54:40] 2025-06-03 16:54:23,037 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,038 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,071 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,188 | INFO     | [payload] control thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,276 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,281 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,384 | INFO     | [job] control thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,464 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,476 | INFO     | [job] validate thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,626 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,787 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,886 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:23,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:54:40] 2025-06-03 16:54:24,004 | INFO     | [data] control thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:24,038 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:27,996 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:32,921 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:54:40] 2025-06-03 16:54:33,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:54:40] 2025-06-03 16:54:35,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201019799360)>', '<ExcThread(monitor, started 140200516761344)>']
[2025-06-03 12:54:40] 2025-06-03 16:54:36,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:54:40] 2025-06-03 16:54:36,104 | INFO     | [monitor] control thread has ended
[2025-06-03 12:54:40] 2025-06-03 16:54:40,461 | INFO     | all workflow threads have been joined
[2025-06-03 12:54:40] 2025-06-03 16:54:40,461 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:54:40] 2025-06-03 16:54:40,462 | INFO     | traces error code: 0
[2025-06-03 12:54:40] 2025-06-03 16:54:40,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:54:40] 2025-06-03 16:54:40,568 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:54:40] 2025-06-03 16:54:40,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:54:40] 2025-06-03 16:54:40,573 [wrapper] pilotpid: 1913356
[2025-06-03 12:54:40] 2025-06-03 16:54:40,575 [wrapper] Pilot exit status: 0
[2025-06-03 12:54:40] 2025-06-03 16:54:40,584 [wrapper] pandaids: 6677617953
[2025-06-03 12:54:40] 2025-06-03 16:54:40,635 [wrapper] cleanup supervisor_pilot 2169755 1913357
[2025-06-03 12:54:40] 2025-06-03 16:54:40,638 [wrapper] Test setup, not cleaning
[2025-06-03 12:54:40] 2025-06-03 16:54:40,640 [wrapper] apfmon messages muted
[2025-06-03 12:54:40] 2025-06-03 16:54:40,642 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:54:40] 2025-06-03 16:54:40,644 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:54:40]  *** Error codes and diagnostics ***
[2025-06-03 12:54:40]     "exeErrorCode": 0,
[2025-06-03 12:54:40]     "exeErrorDiag": "",
[2025-06-03 12:54:40]     "pilotErrorCode": 0,
[2025-06-03 12:54:40]     "pilotErrorDiag": "",
[2025-06-03 12:54:40]  *** Listing of results directory ***
[2025-06-03 12:54:40] total 392388
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:14 pilot3.tar.gz
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:25 queuedata.json
[2025-06-03 12:54:40] -rwx------. 1 boincer umatlas     37140 Jun  3 08:26 runpilot2-wrapper.sh
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:54:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:11 run_atlas
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:11 job.xml
[2025-06-03 12:54:40] -rw-r--r--. 2 boincer umatlas 215315478 Jun  3 11:11 EVNT.45006593._001297.pool.root.1
[2025-06-03 12:54:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:11 start_atlas.sh
[2025-06-03 12:54:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:11 shared
[2025-06-03 12:54:40] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 11:11 input.tar.gz
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:11 boinc_lockfile
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:11 pandaJob.out
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas    982716 Jun  3 11:11 agis_schedconf.cvmfs.json
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:54:40] drwx------. 4 boincer umatlas      4096 Jun  3 11:11 pilot3
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas      6613 Jun  3 12:46 init_data.xml
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas 180832758 Jun  3 12:53 HITS.45006595._032230.pool.root.1
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas       530 Jun  3 12:53 boinc_task_state.xml
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas        95 Jun  3 12:54 pilot_heartbeat.json
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas      1032 Jun  3 12:54 memory_monitor_summary.json
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas    323452 Jun  3 12:54 log.45006595._032230.job.log.tgz.1
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas      7710 Jun  3 12:54 heartbeat.json
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:54 wrapper_checkpoint.txt
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:54 boinc_mmap_file
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas      4548 Jun  3 12:54 pilotlog.txt
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas    591292 Jun  3 12:54 log.45006595._032230.job.log.1
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas       357 Jun  3 12:54 output.list
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:54 runtime_log
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas    931840 Jun  3 12:54 result.tar.gz
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas       650 Jun  3 12:54 ubqLDmYtfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm3jKDmpLhMrm.diag
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 12:54 runtime_log.err
[2025-06-03 12:54:40] -rw-r--r--. 1 boincer umatlas     20892 Jun  3 12:54 stderr.txt
[2025-06-03 12:54:40] HITS file was successfully produced:
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas 180832758 Jun  3 12:53 shared/HITS.pool.root.1
[2025-06-03 12:54:40]  *** Contents of shared directory: ***
[2025-06-03 12:54:40] total 388300
[2025-06-03 12:54:40] -rw-r--r--. 2 boincer umatlas 215315478 Jun  3 11:11 ATLAS.root_0
[2025-06-03 12:54:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:11 start_atlas.sh
[2025-06-03 12:54:40] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 11:11 input.tar.gz
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas 180832758 Jun  3 12:53 HITS.pool.root.1
[2025-06-03 12:54:40] -rw-------. 1 boincer umatlas    931840 Jun  3 12:54 result.tar.gz
12:54:41 (1909753): run_atlas exited; CPU time 42130.912377
12:54:41 (1909753): called boinc_finish(0)

</stderr_txt>
]]>

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