Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:59:13 (1490069): wrapper (7.7.26015): starting
01:59:13 (1490069): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 01:59:13] Arguments: --nthreads 3
[2025-06-04 01:59:13] Threads: 3
[2025-06-04 01:59:13] Checking for CVMFS
[2025-06-04 01:59:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:59:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:59:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:59:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:59:14] 2.9.2.0 941083 1861 64852 146761 1 56 29478637 36864000 0 130560 0 1471431 99.992 444996 44687 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 01:59:14] CVMFS is ok
[2025-06-04 01:59:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:59:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:59:14] Further information can be found at the LHC@home message board.
[2025-06-04 01:59:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:59:14] Checking for apptainer binary...
[2025-06-04 01:59:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:59:14] Running /usr/bin/apptainer --version
[2025-06-04 01:59:14] apptainer version 1.3.6-6.1
[2025-06-04 01:59:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:59:14] thA387a
[2025-06-04 01:59:14] apptainer works
[2025-06-04 01:59:14] Set ATHENA_PROC_NUMBER=3
[2025-06-04 01:59:14] Set ATHENA_CORE_NUMBER=3
[2025-06-04 01:59:14] Starting ATLAS job with PandaID=6677618682
[2025-06-04 01:59:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:24:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:24:37]  lfn=log.45006595._032397.job.log.tgz.1
[2025-06-04 03:24:37]  mtime=0
[2025-06-04 03:24:37]  protocol_id=None
[2025-06-04 03:24:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 03:24:37]  replicas=None
[2025-06-04 03:24:37]  scope=mc23_13p6TeV
[2025-06-04 03:24:37]  status=None
[2025-06-04 03:24:37]  status_code=0
[2025-06-04 03:24:37]  storage_token=
[2025-06-04 03:24:37]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677618682/log.45006595._032397.job.log.tgz.1
[2025-06-04 03:24:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/be/log.45006595._032397.job.log.tgz.1
[2025-06-04 03:24:37]  workdir=None
[2025-06-04 03:24:37] ]
[2025-06-04 03:24:37] 2025-06-04 01:24:09,212 | INFO     | transferring file log.45006595._032397.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677618682/log.45006595._032397.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 03:24:37] 2025-06-04 01:24:09,212 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677618682/log.45006595._032397.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0323
[2025-06-04 03:24:37] 2025-06-04 01:24:09,225 | INFO     | adding to output.list: log.45006595._032397.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/be/log.45006595._032397.job.log.tg
[2025-06-04 03:24:37] 2025-06-04 01:24:09,226 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 03:24:37] 2025-06-04 01:24:09,226 | INFO     | summary of transferred files:
[2025-06-04 03:24:37] 2025-06-04 01:24:09,226 | INFO     |  -- lfn=log.45006595._032397.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 03:24:37] 2025-06-04 01:24:09,226 | INFO     | stage-out finished correctly
[2025-06-04 03:24:37] 2025-06-04 01:24:09,760 | WARNING  | process 1500212 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 03:24:37] 2025-06-04 01:24:09,760 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677618682/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:24:37] 2025-06-04 01:24:09,795 | INFO     | number of running child processes to parent process 1500212: 1
[2025-06-04 03:24:37] 2025-06-04 01:24:09,795 | INFO     | maximum number of monitored processes: 6
[2025-06-04 03:24:37] 2025-06-04 01:24:10,168 | INFO     | PID=1493711 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 03:24:37] 2025-06-04 01:24:10,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | job 6677618682 has state=finished
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | preparing for final server update for job 6677618682 in state='finished'
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | this job has now completed (state=finished)
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | log transfer has been attempted: DONE
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | job 6677618682 has finished - writing final server update
[2025-06-04 03:24:37] 2025-06-04 01:24:10,973 | INFO     | total number of processed events: 400 (read)
[2025-06-04 03:24:37] 2025-06-04 01:24:10,974 | INFO     | executing command: lscpu
[2025-06-04 03:24:37] 2025-06-04 01:24:10,988 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:24:37] 2025-06-04 01:24:12,299 | INFO     | monitor loop #392: job 0:6677618682 is in state 'finished'
[2025-06-04 03:24:37] 2025-06-04 01:24:12,299 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:24:37] 2025-06-04 01:24:14,802 | INFO     | monitor loop #393: job 0:6677618682 is in state 'finished'
[2025-06-04 03:24:37] 2025-06-04 01:24:14,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677618682/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | INFO     | extracted standard info from prmon json
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:24:37] 2025-06-04 01:24:17,111 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | sum of square deviations: 136095575.0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | sum of deviations: -8684778498.0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | mean x: 1748997782.5
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | mean y: 2418890.5789473685
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | -- intersect: 111612648205.57086
[2025-06-04 03:24:37] 2025-06-04 01:24:17,112 | INFO     | intersect: 111612648205.57086
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | chi2: 0.0949280359048774
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | -- intersect: 111612648205.57086
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | current memory leak: -63.81 B/s (using 76 data points, chi2=0.09)
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | ..............................
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . Timing measurements:
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . get job = 0 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . initial setup = 1 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . payload setup = 5 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . stage-in = 0 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . payload execution = 5057 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . stage-out = 0 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | . log creation = 0 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,113 | INFO     | ..............................
[2025-06-04 03:24:37] 2025-06-04 01:24:17,293 | INFO     | 
[2025-06-04 03:24:37] 2025-06-04 01:24:17,294 | INFO     | job summary report
[2025-06-04 03:24:37] 2025-06-04 01:24:17,294 | INFO     | --------------------------------------------------
[2025-06-04 03:24:37] 2025-06-04 01:24:17,294 | INFO     | PanDA job id: 6677618682
[2025-06-04 03:24:37] 2025-06-04 01:24:17,294 | INFO     | task id: 45006595
[2025-06-04 03:24:37] 2025-06-04 01:24:17,294 | INFO     | errors: (none)
[2025-06-04 03:24:37] 2025-06-04 01:24:17,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | pilot state: finished 
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | transexitcode: 0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | exeerrorcode: 0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | exeerrordiag: 
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | exitcode: 0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | exitmsg: OK
[2025-06-04 03:24:37] 2025-06-04 01:24:17,295 | INFO     | cpuconsumptiontime: 14566 s
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | nevents: 400
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | neventsw: 0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | pid: 1500212
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | pgrp: 1500212
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | corecount: 3
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | event service: False
[2025-06-04 03:24:37] 2025-06-04 01:24:17,296 | INFO     | sizes: {0: 2405187, 5: 2405393, 11: 2405449, 5067: 2431729, 5068: 2440676, 5070: 2440732, 5076: 2441030}
[2025-06-04 03:24:37] 2025-06-04 01:24:17,297 | INFO     | --------------------------------------------------
[2025-06-04 03:24:37] 2025-06-04 01:24:17,297 | INFO     | 
[2025-06-04 03:24:37] 2025-06-04 01:24:17,297 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 03:24:37] 2025-06-04 01:24:17,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,310 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,310 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,310 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | job 6677618682 has completed (purged errors)
[2025-06-04 03:24:37] 2025-06-04 01:24:17,311 | INFO     | overall cleanup function is called
[2025-06-04 03:24:37] 2025-06-04 01:24:18,318 | INFO     | --- collectZombieJob: --- 10, [1500212]
[2025-06-04 03:24:37] 2025-06-04 01:24:18,318 | INFO     | zombie collector waiting for pid 1500212
[2025-06-04 03:24:37] 2025-06-04 01:24:18,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:24:37] 2025-06-04 01:24:18,319 | INFO     | collected zombie processes
[2025-06-04 03:24:37] 2025-06-04 01:24:18,319 | INFO     | will attempt to kill all subprocesses of pid=1500212
[2025-06-04 03:24:37] 2025-06-04 01:24:18,361 | INFO     | process IDs to be killed: [1500212] (in reverse order)
[2025-06-04 03:24:37] 2025-06-04 01:24:18,387 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:24:37] 2025-06-04 01:24:18,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:24:37] 2025-06-04 01:24:18,391 | INFO     | did not find any defunct processes belonging to 1500212
[2025-06-04 03:24:37] 2025-06-04 01:24:18,394 | INFO     | did not find any defunct processes belonging to 1500212
[2025-06-04 03:24:37] 2025-06-04 01:24:18,395 | INFO     | ready for new job
[2025-06-04 03:24:37] 2025-06-04 01:24:18,395 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:24:37] 2025-06-04 01:24:18,397 | INFO     | **************************************
[2025-06-04 03:24:37] 2025-06-04 01:24:18,397 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:24:37] 2025-06-04 01:24:18,398 | INFO     | **************************************
[2025-06-04 03:24:37] 2025-06-04 01:24:18,398 | INFO     | 
[2025-06-04 03:24:37] 2025-06-04 01:24:18,399 | INFO     | architecture information:
[2025-06-04 03:24:37] 2025-06-04 01:24:18,400 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:24:37] 2025-06-04 01:24:18,430 | INFO     | cat /etc/os-release:
[2025-06-04 03:24:37] NAME="CentOS Linux"
[2025-06-04 03:24:37] VERSION="7 (Core)"
[2025-06-04 03:24:37] ID="centos"
[2025-06-04 03:24:37] ID_LIKE="rhel fedora"
[2025-06-04 03:24:37] VERSION_ID="7"
[2025-06-04 03:24:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:24:37] ANSI_COLOR="0;31"
[2025-06-04 03:24:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:24:37] HOME_URL="https://www.centos.org/"
[2025-06-04 03:24:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:24:37] 
[2025-06-04 03:24:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:24:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:24:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:24:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:24:37] 
[2025-06-04 03:24:37] 2025-06-04 01:24:18,430 | INFO     | **************************************
[2025-06-04 03:24:37] 2025-06-04 01:24:18,934 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 03:24:37] 2025-06-04 01:24:18,947 | INFO     | sufficient remaining disk space (827839217664 B)
[2025-06-04 03:24:37] 2025-06-04 01:24:18,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:24:37] 2025-06-04 01:24:18,947 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:24:37] 2025-06-04 01:24:18,947 | INFO     | update_server=False
[2025-06-04 03:24:37] 2025-06-04 01:24:18,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | INFO     | aborting loop
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:24:37] 2025-06-04 01:24:18,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:24:37] 2025-06-04 01:24:19,262 | INFO     | all job control threads have been joined
[2025-06-04 03:24:37] 2025-06-04 01:24:19,268 | INFO     | all data control threads have been joined
[2025-06-04 03:24:37] 2025-06-04 01:24:19,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:24:37] 2025-06-04 01:24:19,861 | INFO     | all payload control threads have been joined
[2025-06-04 03:24:37] 2025-06-04 01:24:19,953 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:19,954 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:19,955 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,044 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,062 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,233 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,267 | INFO     | [job] control thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,274 | INFO     | [data] control thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,344 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,841 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:20,867 | INFO     | [payload] control thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:21,000 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:21,211 | INFO     | [job] validate thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:21,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:24:37] 2025-06-04 01:24:21,779 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:25,490 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:29,144 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:24:37] 2025-06-04 01:24:30,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:24:37] 2025-06-04 01:24:31,987 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684800628544)>', '<ExcThread(monitor, started 139684005013248)>']
[2025-06-04 03:24:37] 2025-06-04 01:24:32,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:24:37] 2025-06-04 01:24:32,016 | INFO     | [monitor] control thread has ended
[2025-06-04 03:24:37] 2025-06-04 01:24:37,013 | INFO     | all workflow threads have been joined
[2025-06-04 03:24:37] 2025-06-04 01:24:37,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:24:37] 2025-06-04 01:24:37,015 | INFO     | traces error code: 0
[2025-06-04 03:24:37] 2025-06-04 01:24:37,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:24:37] 2025-06-04 01:24:37,064 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:24:37] 2025-06-04 01:24:37,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:24:37] 2025-06-04 01:24:37,070 [wrapper] pilotpid: 1493711
[2025-06-04 03:24:37] 2025-06-04 01:24:37,073 [wrapper] Pilot exit status: 0
[2025-06-04 03:24:37] 2025-06-04 01:24:37,081 [wrapper] pandaids: 6677618682
[2025-06-04 03:24:37] 2025-06-04 01:24:37,097 [wrapper] cleanup supervisor_pilot 1512362 1493712
[2025-06-04 03:24:37] 2025-06-04 01:24:37,100 [wrapper] Test setup, not cleaning
[2025-06-04 03:24:37] 2025-06-04 01:24:37,103 [wrapper] apfmon messages muted
[2025-06-04 03:24:37] 2025-06-04 01:24:37,105 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:24:37] 2025-06-04 01:24:37,107 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:24:37]  *** Error codes and diagnostics ***
[2025-06-04 03:24:37]     "exeErrorCode": 0,
[2025-06-04 03:24:37]     "exeErrorDiag": "",
[2025-06-04 03:24:37]     "pilotErrorCode": 0,
[2025-06-04 03:24:37]     "pilotErrorDiag": "",
[2025-06-04 03:24:37]  *** Listing of results directory ***
[2025-06-04 03:24:37] total 393628
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:27 queuedata.json
[2025-06-04 03:24:37] -rwx------ 1 boinc boinc     37140 Jun  3 14:28 runpilot2-wrapper.sh
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc       100 Jun  4 01:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:24:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 01:59 run_atlas
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc       105 Jun  4 01:59 job.xml
[2025-06-04 03:24:37] -rw-r--r-- 2 boinc boinc 214582569 Jun  4 01:59 EVNT.45006593._001304.pool.root.1
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc      6680 Jun  4 01:59 init_data.xml
[2025-06-04 03:24:37] drwxrwx--x 2 boinc boinc      4096 Jun  4 01:59 shared
[2025-06-04 03:24:37] -rw-r--r-- 2 boinc boinc    508885 Jun  4 01:59 input.tar.gz
[2025-06-04 03:24:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:59 start_atlas.sh
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc         0 Jun  4 01:59 boinc_lockfile
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc      2525 Jun  4 01:59 pandaJob.out
[2025-06-04 03:24:37] -rw------- 1 boinc boinc    986077 Jun  4 01:59 agis_schedconf.cvmfs.json
[2025-06-04 03:24:37] -rw------- 1 boinc boinc   1603667 Jun  4 01:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:24:37] drwx------ 4 boinc boinc      4096 Jun  4 01:59 pilot3
[2025-06-04 03:24:37] -rw------- 1 boinc boinc 183233832 Jun  4 03:23 HITS.45006595._032397.pool.root.1
[2025-06-04 03:24:37] -rw------- 1 boinc boinc        95 Jun  4 03:23 pilot_heartbeat.json
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc       529 Jun  4 03:23 boinc_task_state.xml
[2025-06-04 03:24:37] -rw------- 1 boinc boinc      1015 Jun  4 03:24 memory_monitor_summary.json
[2025-06-04 03:24:37] -rw------- 1 boinc boinc    219642 Jun  4 03:24 log.45006595._032397.job.log.tgz.1
[2025-06-04 03:24:37] -rw------- 1 boinc boinc      7654 Jun  4 03:24 heartbeat.json
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc      8192 Jun  4 03:24 boinc_mmap_file
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc        27 Jun  4 03:24 wrapper_checkpoint.txt
[2025-06-04 03:24:37] -rw------- 1 boinc boinc      4552 Jun  4 03:24 pilotlog.txt
[2025-06-04 03:24:37] -rw------- 1 boinc boinc    492656 Jun  4 03:24 log.45006595._032397.job.log.1
[2025-06-04 03:24:37] -rw------- 1 boinc boinc       357 Jun  4 03:24 output.list
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc       620 Jun  4 03:24 runtime_log
[2025-06-04 03:24:37] -rw------- 1 boinc boinc    727040 Jun  4 03:24 result.tar.gz
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc      8738 Jun  4 03:24 runtime_log.err
[2025-06-04 03:24:37] -rw------- 1 boinc boinc       659 Jun  4 03:24 QjdLDmTvfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXbYKDmh4iCmm.diag
[2025-06-04 03:24:37] -rw-r--r-- 1 boinc boinc     21680 Jun  4 03:24 stderr.txt
[2025-06-04 03:24:37] HITS file was successfully produced:
[2025-06-04 03:24:37] -rw------- 1 boinc boinc 183233832 Jun  4 03:23 shared/HITS.pool.root.1
[2025-06-04 03:24:37]  *** Contents of shared directory: ***
[2025-06-04 03:24:37] total 389732
[2025-06-04 03:24:37] -rw-r--r-- 2 boinc boinc 214582569 Jun  4 01:59 ATLAS.root_0
[2025-06-04 03:24:37] -rw-r--r-- 2 boinc boinc    508885 Jun  4 01:59 input.tar.gz
[2025-06-04 03:24:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:59 start_atlas.sh
[2025-06-04 03:24:37] -rw------- 1 boinc boinc 183233832 Jun  4 03:23 HITS.pool.root.1
[2025-06-04 03:24:37] -rw------- 1 boinc boinc    727040 Jun  4 03:24 result.tar.gz
03:24:39 (1490069): run_atlas exited; CPU time 14593.701651
03:24:39 (1490069): called boinc_finish(0)

</stderr_txt>
]]>

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