Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:54 (1728154): wrapper (7.7.26015): starting
11:13:54 (1728154): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 11:13:54] Arguments: --nthreads 8
[2025-06-03 11:13:54] Threads: 8
[2025-06-03 11:13:54] Checking for CVMFS
[2025-06-03 11:13:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:13:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:13:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:13:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:13:55] 2.12.6.0 956287 147007 213120 146746 3 135 18531071 32935937 2916 130560 0 382353603 99.654 358330431 26170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 11:13:55] CVMFS is ok
[2025-06-03 11:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 11:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 11:13:55] Further information can be found at the LHC@home message board.
[2025-06-03 11:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:13:55] Checking for apptainer binary...
[2025-06-03 11:13:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:13:55] Running /usr/bin/apptainer --version
[2025-06-03 11:13:55] apptainer version 1.4.1-1.el9
[2025-06-03 11:13:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:13:55] c-6-4.aglt2.org
[2025-06-03 11:13:55] apptainer works
[2025-06-03 11:13:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 11:13:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 11:13:55] Starting ATLAS job with PandaID=6677616881
[2025-06-03 11:13:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:45:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:45:32]  is_tar=False
[2025-06-03 12:45:32]  lfn=log.45006595._031712.job.log.tgz.1
[2025-06-03 12:45:32]  mtime=0
[2025-06-03 12:45:32]  protocol_id=None
[2025-06-03 12:45:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 12:45:32]  replicas=None
[2025-06-03 12:45:32]  scope=mc23_13p6TeV
[2025-06-03 12:45:32]  status=None
[2025-06-03 12:45:32]  status_code=0
[2025-06-03 12:45:32]  storage_token=
[2025-06-03 12:45:32]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677616881/log.45006595._031712.job.log.tgz.1
[2025-06-03 12:45:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/a7/log.45006595._031712.job.log.tgz.1
[2025-06-03 12:45:32]  workdir=None
[2025-06-03 12:45:32] ]
[2025-06-03 12:45:32] 2025-06-03 16:45:16,041 | INFO     | transferring file log.45006595._031712.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677616881/log.45006595._031712.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 12:45:32] 2025-06-03 16:45:16,042 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677616881/log.45006595._031712.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._031712.job
[2025-06-03 12:45:32] 2025-06-03 16:45:16,057 | INFO     | adding to output.list: log.45006595._031712.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/a7/log.45006595._031712.job.log.tg
[2025-06-03 12:45:32] 2025-06-03 16:45:16,058 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 12:45:32] 2025-06-03 16:45:16,058 | INFO     | summary of transferred files:
[2025-06-03 12:45:32] 2025-06-03 16:45:16,058 | INFO     |  -- lfn=log.45006595._031712.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 12:45:32] 2025-06-03 16:45:16,058 | INFO     | stage-out finished correctly
[2025-06-03 12:45:32] 2025-06-03 16:45:16,300 | INFO     | monitor loop #406: job 0:6677616881 is in state 'finished'
[2025-06-03 12:45:32] 2025-06-03 16:45:16,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:45:32] 2025-06-03 16:45:17,015 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 12:45:32] 2025-06-03 16:45:17,941 | INFO     | PID=1735650 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 12:45:32] 2025-06-03 16:45:17,941 | INFO     | .. there are 5 such processes running
[2025-06-03 12:45:32] 2025-06-03 16:45:17,955 | INFO     | job 6677616881 has state=finished
[2025-06-03 12:45:32] 2025-06-03 16:45:17,955 | INFO     | preparing for final server update for job 6677616881 in state='finished'
[2025-06-03 12:45:32] 2025-06-03 16:45:17,956 | INFO     | this job has now completed (state=finished)
[2025-06-03 12:45:32] 2025-06-03 16:45:17,956 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:45:32] 2025-06-03 16:45:17,956 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:45:32] 2025-06-03 16:45:17,956 | INFO     | job 6677616881 has finished - writing final server update
[2025-06-03 12:45:32] 2025-06-03 16:45:17,957 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:45:32] 2025-06-03 16:45:17,970 | INFO     | executing command: lscpu
[2025-06-03 12:45:32] 2025-06-03 16:45:18,001 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:45:32] 2025-06-03 16:45:18,804 | INFO     | monitor loop #407: job 0:6677616881 is in state 'finished'
[2025-06-03 12:45:32] 2025-06-03 16:45:18,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,307 | INFO     | monitor loop #408: job 0:6677616881 is in state 'finished'
[2025-06-03 12:45:32] 2025-06-03 16:45:21,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,419 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 12:45:32] 2025-06-03 16:45:21,419 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677616881/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,421 | INFO     | extracted standard info from prmon json
[2025-06-03 12:45:32] 2025-06-03 16:45:21,421 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:45:32] 2025-06-03 16:45:21,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:45:32] 2025-06-03 16:45:21,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:45:32] 2025-06-03 16:45:21,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:45:32] 2025-06-03 16:45:21,424 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:45:32] 2025-06-03 16:45:21,424 | INFO     | sum of square deviations: 177275882.0
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | sum of deviations: 13579985615.000002
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | mean x: 1748966475.0
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | mean y: 2128108.012048193
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | -- intersect: -133975146768.08904
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | intersect: -133975146768.08904
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | chi2: 1.1675632281603534
[2025-06-03 12:45:32] 2025-06-03 16:45:21,425 | INFO     | -- intersect: -133975146768.08904
[2025-06-03 12:45:32] 2025-06-03 16:45:21,426 | INFO     | current memory leak: 76.60 B/s (using 83 data points, chi2=1.17)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,426 | INFO     | ..............................
[2025-06-03 12:45:32] 2025-06-03 16:45:21,426 | INFO     | . Timing measurements:
[2025-06-03 12:45:32] 2025-06-03 16:45:21,426 | INFO     | . get job = 0 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,426 | INFO     | . initial setup = 2 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,427 | INFO     | . payload setup = 5 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,427 | INFO     | . stage-in = 0 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,427 | INFO     | . payload execution = 5445 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,427 | INFO     | . stage-out = 0 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,427 | INFO     | . log creation = 0 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,427 | INFO     | ..............................
[2025-06-03 12:45:32] 2025-06-03 16:45:21,535 | INFO     | 
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | job summary report
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | --------------------------------------------------
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | PanDA job id: 6677616881
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | task id: 45006595
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | errors: (none)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | pilot state: finished 
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | transexitcode: 0
[2025-06-03 12:45:32] 2025-06-03 16:45:21,536 | INFO     | exeerrorcode: 0
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | exeerrordiag: 
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | exitcode: 0
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | exitmsg: OK
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | cpuconsumptiontime: 37102 s
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | nevents: 400
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | neventsw: 0
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | pid: 1746982
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | pgrp: 1746982
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | corecount: 8
[2025-06-03 12:45:32] 2025-06-03 16:45:21,537 | INFO     | event service: False
[2025-06-03 12:45:32] 2025-06-03 16:45:21,538 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 5454: 2431907, 5455: 2431906, 5456: 2440903, 5457: 2441087, 5461: 2441257}
[2025-06-03 12:45:32] 2025-06-03 16:45:21,538 | INFO     | --------------------------------------------------
[2025-06-03 12:45:32] 2025-06-03 16:45:21,538 | INFO     | 
[2025-06-03 12:45:32] 2025-06-03 16:45:21,538 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 12:45:32] 2025-06-03 16:45:21,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,557 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:45:32] 2025-06-03 16:45:21,557 | INFO     | job 6677616881 has completed (purged errors)
[2025-06-03 12:45:32] 2025-06-03 16:45:21,557 | INFO     | overall cleanup function is called
[2025-06-03 12:45:32] 2025-06-03 16:45:22,564 | INFO     | --- collectZombieJob: --- 10, [1746982]
[2025-06-03 12:45:32] 2025-06-03 16:45:22,565 | INFO     | zombie collector waiting for pid 1746982
[2025-06-03 12:45:32] 2025-06-03 16:45:22,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:45:32] 2025-06-03 16:45:22,565 | INFO     | collected zombie processes
[2025-06-03 12:45:32] 2025-06-03 16:45:22,565 | INFO     | will attempt to kill all subprocesses of pid=1746982
[2025-06-03 12:45:32] 2025-06-03 16:45:22,819 | INFO     | process IDs to be killed: [1746982] (in reverse order)
[2025-06-03 12:45:32] 2025-06-03 16:45:22,894 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:45:32] 2025-06-03 16:45:22,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:45:32] 2025-06-03 16:45:22,903 | INFO     | did not find any defunct processes belonging to 1746982
[2025-06-03 12:45:32] 2025-06-03 16:45:22,910 | INFO     | did not find any defunct processes belonging to 1746982
[2025-06-03 12:45:32] 2025-06-03 16:45:22,910 | INFO     | ready for new job
[2025-06-03 12:45:32] 2025-06-03 16:45:22,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:45:32] 2025-06-03 16:45:22,912 | INFO     | **************************************
[2025-06-03 12:45:32] 2025-06-03 16:45:22,912 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:45:32] 2025-06-03 16:45:22,912 | INFO     | **************************************
[2025-06-03 12:45:32] 2025-06-03 16:45:22,912 | INFO     | 
[2025-06-03 12:45:32] 2025-06-03 16:45:22,926 | INFO     | architecture information:
[2025-06-03 12:45:32] 2025-06-03 16:45:22,927 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:45:32] 2025-06-03 16:45:22,939 | INFO     | cat /etc/os-release:
[2025-06-03 12:45:32] NAME="CentOS Linux"
[2025-06-03 12:45:32] VERSION="7 (Core)"
[2025-06-03 12:45:32] ID="centos"
[2025-06-03 12:45:32] ID_LIKE="rhel fedora"
[2025-06-03 12:45:32] VERSION_ID="7"
[2025-06-03 12:45:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:45:32] ANSI_COLOR="0;31"
[2025-06-03 12:45:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:45:32] HOME_URL="https://www.centos.org/"
[2025-06-03 12:45:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:45:32] 
[2025-06-03 12:45:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:45:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:45:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:45:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:45:32] 
[2025-06-03 12:45:32] 2025-06-03 16:45:22,940 | INFO     | **************************************
[2025-06-03 12:45:32] 2025-06-03 16:45:23,443 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 12:45:32] 2025-06-03 16:45:23,458 | INFO     | sufficient remaining disk space (74289512448 B)
[2025-06-03 12:45:32] 2025-06-03 16:45:23,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:45:32] 2025-06-03 16:45:23,458 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:45:32] 2025-06-03 16:45:23,458 | INFO     | update_server=False
[2025-06-03 12:45:32] 2025-06-03 16:45:23,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:45:32] 2025-06-03 16:45:23,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:45:32] 2025-06-03 16:45:23,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:45:32] 2025-06-03 16:45:23,684 | INFO     | all data control threads have been joined
[2025-06-03 12:45:32] 2025-06-03 16:45:23,810 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 12:45:32] 2025-06-03 16:45:23,811 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 12:45:32] 2025-06-03 16:45:23,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:45:32] 2025-06-03 16:45:23,811 | INFO     | will abort loop
[2025-06-03 12:45:32] 2025-06-03 16:45:23,879 | INFO     | all job control threads have been joined
[2025-06-03 12:45:32] 2025-06-03 16:45:23,959 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:45:32] 2025-06-03 16:45:23,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:45:32] 2025-06-03 16:45:23,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:45:32] 2025-06-03 16:45:24,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:45:32] 2025-06-03 16:45:24,381 | INFO     | all payload control threads have been joined
[2025-06-03 12:45:32] 2025-06-03 16:45:24,464 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:24,464 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:24,589 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:24,689 | INFO     | [data] control thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:24,815 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:24,885 | INFO     | [job] control thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:24,927 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,239 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,325 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,382 | INFO     | [payload] control thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,413 | INFO     | [job] validate thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,573 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:25,856 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:26,186 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:27,466 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:45:32] 2025-06-03 16:45:27,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538759632704)>', '<ExcThread(monitor, started 140538275673856)>']
[2025-06-03 12:45:32] 2025-06-03 16:45:27,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:45:32] 2025-06-03 16:45:27,981 | INFO     | [monitor] control thread has ended
[2025-06-03 12:45:32] 2025-06-03 16:45:32,515 | INFO     | all workflow threads have been joined
[2025-06-03 12:45:32] 2025-06-03 16:45:32,516 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:45:32] 2025-06-03 16:45:32,516 | INFO     | traces error code: 0
[2025-06-03 12:45:32] 2025-06-03 16:45:32,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:45:32] 2025-06-03 16:45:32,623 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:45:32] 2025-06-03 16:45:32,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:45:32] 2025-06-03 16:45:32,628 [wrapper] pilotpid: 1735650
[2025-06-03 12:45:32] 2025-06-03 16:45:32,630 [wrapper] Pilot exit status: 0
[2025-06-03 12:45:32] 2025-06-03 16:45:32,639 [wrapper] pandaids: 6677616881
[2025-06-03 12:45:32] 2025-06-03 16:45:32,689 [wrapper] cleanup supervisor_pilot 1964599 1735652
[2025-06-03 12:45:32] 2025-06-03 16:45:32,691 [wrapper] Test setup, not cleaning
[2025-06-03 12:45:32] 2025-06-03 16:45:32,694 [wrapper] apfmon messages muted
[2025-06-03 12:45:32] 2025-06-03 16:45:32,697 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:45:32] 2025-06-03 16:45:32,699 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:45:32]  *** Error codes and diagnostics ***
[2025-06-03 12:45:32]     "exeErrorCode": 0,
[2025-06-03 12:45:32]     "exeErrorDiag": "",
[2025-06-03 12:45:32]     "pilotErrorCode": 0,
[2025-06-03 12:45:32]     "pilotErrorDiag": "",
[2025-06-03 12:45:32]  *** Listing of results directory ***
[2025-06-03 12:45:32] total 385592
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 08:08 queuedata.json
[2025-06-03 12:45:32] -rwx------. 1 boincer umatlas     37140 Jun  3 08:09 runpilot2-wrapper.sh
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas       100 Jun  3 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:45:32] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 11:13 run_atlas
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas       105 Jun  3 11:13 job.xml
[2025-06-03 12:45:32] -rw-r--r--. 2 boincer umatlas 216408374 Jun  3 11:13 EVNT.45006593._001276.pool.root.1
[2025-06-03 12:45:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:13 start_atlas.sh
[2025-06-03 12:45:32] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 11:13 shared
[2025-06-03 12:45:32] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 11:13 input.tar.gz
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas         0 Jun  3 11:13 boinc_lockfile
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 11:13 pandaJob.out
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas    982716 Jun  3 11:14 agis_schedconf.cvmfs.json
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas   1603667 Jun  3 11:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:45:32] drwx------. 4 boincer umatlas      4096 Jun  3 11:14 pilot3
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas       529 Jun  3 12:44 boinc_task_state.xml
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas 172890583 Jun  3 12:44 HITS.45006595._031712.pool.root.1
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas        95 Jun  3 12:44 pilot_heartbeat.json
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 12:45 init_data.xml
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas      1028 Jun  3 12:45 memory_monitor_summary.json
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas    322792 Jun  3 12:45 log.45006595._031712.job.log.tgz.1
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas      7700 Jun  3 12:45 heartbeat.json
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:45 boinc_mmap_file
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:45 wrapper_checkpoint.txt
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas      4539 Jun  3 12:45 pilotlog.txt
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas    533956 Jun  3 12:45 log.45006595._031712.job.log.1
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas       357 Jun  3 12:45 output.list
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:45 runtime_log
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas    880640 Jun  3 12:45 result.tar.gz
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas       648 Jun  3 12:45 xlNKDmYdfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyxjKDm2amCKn.diag
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 12:45 runtime_log.err
[2025-06-03 12:45:32] -rw-r--r--. 1 boincer umatlas     21574 Jun  3 12:45 stderr.txt
[2025-06-03 12:45:32] HITS file was successfully produced:
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas 172890583 Jun  3 12:44 shared/HITS.pool.root.1
[2025-06-03 12:45:32]  *** Contents of shared directory: ***
[2025-06-03 12:45:32] total 381560
[2025-06-03 12:45:32] -rw-r--r--. 2 boincer umatlas 216408374 Jun  3 11:13 ATLAS.root_0
[2025-06-03 12:45:32] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 11:13 start_atlas.sh
[2025-06-03 12:45:32] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 11:13 input.tar.gz
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas 172890583 Jun  3 12:44 HITS.pool.root.1
[2025-06-03 12:45:32] -rw-------. 1 boincer umatlas    880640 Jun  3 12:45 result.tar.gz
12:45:34 (1728154): run_atlas exited; CPU time 37234.546379
12:45:34 (1728154): called boinc_finish(0)

</stderr_txt>
]]>

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