Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:40:35 (5605): wrapper (7.7.26015): starting
02:40:35 (5605): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:40:35] Arguments: --nthreads 8
[2025-06-04 02:40:35] Threads: 8
[2025-06-04 02:40:35] Checking for CVMFS
[2025-06-04 02:40:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:40:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:40:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:40:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:40:37] 2.11.2.0 16701 32612 99848 146762 1 104 15231272 25165825 4287 130560 0 18826422 99.840 18729501 2572 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:40:37] CVMFS is ok
[2025-06-04 02:40:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:40:37] Checking for apptainer binary...
[2025-06-04 02:40:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:40:37] Running /usr/bin/apptainer --version
[2025-06-04 02:40:37] apptainer version 1.3.2-1.el7
[2025-06-04 02:40:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:42:10] cg-vwn475.simple-grid.lan
[2025-06-04 02:42:10] apptainer works
[2025-06-04 02:42:10] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:42:10] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:42:10] Starting ATLAS job with PandaID=6677617918
[2025-06-04 02:42:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:02:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:02:03] 2025-06-04 04:18:51,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:02:03] 2025-06-04 04:18:53,597 | INFO     | PID=13287 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 10:02:03] 2025-06-04 04:18:53,598 | INFO     | .. there are 9 such processes running
[2025-06-04 10:02:03] 2025-06-04 04:18:54,366 | INFO     | monitor loop #958: job 0:6677617918 is in state 'finished'
[2025-06-04 10:02:03] 2025-06-04 04:18:54,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:02:03] 2025-06-04 04:18:56,871 | INFO     | monitor loop #959: job 0:6677617918 is in state 'finished'
[2025-06-04 10:02:03] 2025-06-04 04:18:56,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,298 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 10:02:03] 2025-06-04 04:18:59,298 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-6677617918/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,299 | INFO     | extracted standard info from prmon json
[2025-06-04 10:02:03] 2025-06-04 04:18:59,299 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:02:03] 2025-06-04 04:18:59,299 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:02:03] 2025-06-04 04:18:59,299 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:02:03] 2025-06-04 04:18:59,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:02:03] 2025-06-04 04:18:59,304 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:02:03] 2025-06-04 04:18:59,304 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,306 | INFO     | sum of deviations: 18377775610.000008
[2025-06-04 10:02:03] 2025-06-04 04:18:59,306 | INFO     | mean x: 1749004506.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,306 | INFO     | mean y: 2505438.2437810944
[2025-06-04 10:02:03] 2025-06-04 04:18:59,306 | INFO     | -- intersect: -12762706403.098007
[2025-06-04 10:02:03] 2025-06-04 04:18:59,306 | INFO     | intersect: -12762706403.098007
[2025-06-04 10:02:03] 2025-06-04 04:18:59,306 | INFO     | chi2: 5.0904503550557525
[2025-06-04 10:02:03] 2025-06-04 04:18:59,307 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,308 | INFO     | sum of deviations: 31540909917.000015
[2025-06-04 10:02:03] 2025-06-04 04:18:59,308 | INFO     | mean x: 1749004353.5
[2025-06-04 10:02:03] 2025-06-04 04:18:59,308 | INFO     | mean y: 2516165.5204081633
[2025-06-04 10:02:03] 2025-06-04 04:18:59,309 | INFO     | -- intersect: -23625636904.693092
[2025-06-04 10:02:03] 2025-06-04 04:18:59,309 | INFO     | intersect: -23625636904.693092
[2025-06-04 10:02:03] 2025-06-04 04:18:59,309 | INFO     | chi2: 4.3638431102731685
[2025-06-04 10:02:03] 2025-06-04 04:18:59,309 | INFO     | current chi2=4.3638431102731685 (change=14.27392851520356 %)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,309 | INFO     | right removable region: 195
[2025-06-04 10:02:03] 2025-06-04 04:18:59,310 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,311 | INFO     | sum of deviations: -46207623555.5
[2025-06-04 10:02:03] 2025-06-04 04:18:59,311 | INFO     | mean x: 1749004658.5
[2025-06-04 10:02:03] 2025-06-04 04:18:59,311 | INFO     | mean y: 2559052.6173469387
[2025-06-04 10:02:03] 2025-06-04 04:18:59,311 | INFO     | -- intersect: 34617952065.908325
[2025-06-04 10:02:03] 2025-06-04 04:18:59,311 | INFO     | intersect: 34617952065.908325
[2025-06-04 10:02:03] 2025-06-04 04:18:59,312 | INFO     | chi2: 1.124202296087008
[2025-06-04 10:02:03] 2025-06-04 04:18:59,312 | INFO     | current chi2=1.124202296087008 (change=77.91546488670755 %)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,315 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,317 | INFO     | sum of deviations: -55689919744.000015
[2025-06-04 10:02:03] 2025-06-04 04:18:59,317 | INFO     | mean x: 1749004811.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,317 | INFO     | mean y: 2567292.0366492146
[2025-06-04 10:02:03] 2025-06-04 04:18:59,317 | INFO     | -- intersect: 45084338980.26039
[2025-06-04 10:02:03] 2025-06-04 04:18:59,317 | INFO     | intersect: 45084338980.26039
[2025-06-04 10:02:03] 2025-06-04 04:18:59,317 | INFO     | chi2: 0.9701577334900247
[2025-06-04 10:02:03] 2025-06-04 04:18:59,318 | INFO     | current chi2=0.9701577334900247 (change=13.702566089142817 %)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,318 | INFO     | left removable region: 20
[2025-06-04 10:02:03] 2025-06-04 04:18:59,318 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,319 | INFO     | sum of deviations: -34484341026.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,319 | INFO     | mean x: 1749004933.0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,319 | INFO     | mean y: 2573706.931428571
[2025-06-04 10:02:03] 2025-06-04 04:18:59,319 | INFO     | -- intersect: 36296552150.36512
[2025-06-04 10:02:03] 2025-06-04 04:18:59,319 | INFO     | intersect: 36296552150.36512
[2025-06-04 10:02:03] 2025-06-04 04:18:59,320 | INFO     | chi2: 0.16236586313019039
[2025-06-04 10:02:03] 2025-06-04 04:18:59,320 | INFO     | -- intersect: 36296552150.36512
[2025-06-04 10:02:03] 2025-06-04 04:18:59,320 | INFO     | current memory leak: -20.75 B/s (using 175 data points, chi2=0.16)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | ..............................
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . Timing measurements:
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . get job = 0 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . initial setup = 6 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . payload setup = 154 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . stage-in = 0 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . payload execution = 12380 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . stage-out = 5 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,321 | INFO     | . log creation = 1 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,322 | INFO     | ..............................
[2025-06-04 10:02:03] 2025-06-04 04:18:59,484 | INFO     | 
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | job summary report
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | --------------------------------------------------
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | PanDA job id: 6677617918
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | task id: 45006595
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | errors: (none)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | pilot state: finished 
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | transexitcode: 0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | exeerrorcode: 0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | exeerrordiag: 
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | exitcode: 0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,485 | INFO     | exitmsg: OK
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | cpuconsumptiontime: 44012 s
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | nevents: 400
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | neventsw: 0
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | pid: 21970
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | pgrp: 21970
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | corecount: 8
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | event service: False
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | sizes: {0: 2404958, 1: 2405213, 12: 2405213, 23: 2405241, 34: 2405269, 44: 2405297, 55: 2405453, 66: 2405481, 76: 2405509, 87: 2405565, 91: 2405799, 98: 2406107, 1
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | --------------------------------------------------
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | 
[2025-06-04 10:02:03] 2025-06-04 04:18:59,486 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-04 10:02:03] 2025-06-04 04:18:59,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:02:03] 2025-06-04 04:18:59,855 | INFO     | job 6677617918 has completed (purged errors)
[2025-06-04 10:02:03] 2025-06-04 04:18:59,855 | INFO     | overall cleanup function is called
[2025-06-04 10:02:03] 2025-06-04 04:19:00,864 | INFO     | --- collectZombieJob: --- 10, [21970]
[2025-06-04 10:02:03] 2025-06-04 04:19:00,865 | INFO     | zombie collector waiting for pid 21970
[2025-06-04 10:02:03] 2025-06-04 04:19:00,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:02:03] 2025-06-04 04:19:00,865 | INFO     | collected zombie processes
[2025-06-04 10:02:03] 2025-06-04 04:19:00,865 | INFO     | will attempt to kill all subprocesses of pid=21970
[2025-06-04 10:02:03] 2025-06-04 04:19:00,966 | INFO     | process IDs to be killed: [21970] (in reverse order)
[2025-06-04 10:02:03] 2025-06-04 04:19:01,645 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:02:03] 2025-06-04 04:19:01,645 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:02:03] 2025-06-04 04:19:01,650 | INFO     | did not find any defunct processes belonging to 21970
[2025-06-04 10:02:03] 2025-06-04 04:19:01,654 | INFO     | did not find any defunct processes belonging to 21970
[2025-06-04 10:02:03] 2025-06-04 04:19:01,654 | INFO     | ready for new job
[2025-06-04 10:02:03] 2025-06-04 04:19:01,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:02:03] 2025-06-04 04:19:01,656 | INFO     | **************************************
[2025-06-04 10:02:03] 2025-06-04 04:19:01,657 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:02:03] 2025-06-04 04:19:01,657 | INFO     | **************************************
[2025-06-04 10:02:03] 2025-06-04 04:19:01,657 | INFO     | 
[2025-06-04 10:02:03] 2025-06-04 04:19:01,657 | INFO     | pilot is running in a VM
[2025-06-04 10:02:03] 2025-06-04 04:19:01,657 | INFO     | architecture information:
[2025-06-04 10:02:03] 2025-06-04 04:19:01,674 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:02:03] 2025-06-04 04:19:01,941 | INFO     | cat /etc/os-release:
[2025-06-04 10:02:03] NAME="CentOS Linux"
[2025-06-04 10:02:03] VERSION="7 (Core)"
[2025-06-04 10:02:03] ID="centos"
[2025-06-04 10:02:03] ID_LIKE="rhel fedora"
[2025-06-04 10:02:03] VERSION_ID="7"
[2025-06-04 10:02:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:02:03] ANSI_COLOR="0;31"
[2025-06-04 10:02:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:02:03] HOME_URL="https://www.centos.org/"
[2025-06-04 10:02:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:02:03] 
[2025-06-04 10:02:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:02:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:02:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:02:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:02:03] 
[2025-06-04 10:02:03] 2025-06-04 04:19:01,941 | INFO     | **************************************
[2025-06-04 10:02:03] 2025-06-04 04:19:02,445 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-04 10:02:03] 2025-06-04 04:19:02,738 | INFO     | sufficient remaining disk space (496940089344 B)
[2025-06-04 10:02:03] 2025-06-04 04:19:02,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:02:03] 2025-06-04 04:19:02,739 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:02:03] 2025-06-04 04:19:02,739 | INFO     | update_server=False
[2025-06-04 10:02:03] 2025-06-04 04:19:02,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:02:03] 2025-06-04 04:19:02,758 | INFO     | all data control threads have been joined
[2025-06-04 10:02:03] 2025-06-04 04:19:02,776 | INFO     | all payload control threads have been joined
[2025-06-04 10:02:03] 2025-06-04 04:19:02,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:02:03] 2025-06-04 04:19:02,909 | INFO     | aborting loop
[2025-06-04 10:02:03] 2025-06-04 04:19:03,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:02:03] 2025-06-04 04:19:03,647 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:02:03] 2025-06-04 04:19:03,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:02:03] 2025-06-04 04:19:03,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:02:03] 2025-06-04 04:19:03,746 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:03,764 | INFO     | [data] control thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:03,782 | INFO     | [payload] control thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:03,915 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:03,982 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:03,983 | INFO     | [job] validate thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:04,015 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:04,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:04,152 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:04,261 | INFO     | all job control threads have been joined
[2025-06-04 10:02:03] 2025-06-04 04:19:04,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:02:03] 2025-06-04 04:19:04,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:02:03] 2025-06-04 04:19:04,563 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:04,838 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:05,267 | INFO     | [job] control thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:05,292 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:05,420 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:05,505 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:08,543 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:02:03] 2025-06-04 04:19:09,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175289820992)>', '<ExcThread(monitor, started 140174688241408)>']
[2025-06-04 10:02:03] 2025-06-04 04:19:09,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:02:03] 2025-06-04 04:19:09,683 | INFO     | [monitor] control thread has ended
[2025-06-04 10:02:03] 2025-06-04 04:19:14,332 | INFO     | all workflow threads have been joined
[2025-06-04 10:02:03] 2025-06-04 04:19:14,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:02:03] 2025-06-04 04:19:14,333 | INFO     | traces error code: 0
[2025-06-04 10:02:03] 2025-06-04 04:19:14,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:02:03] 2025-06-04 04:19:14,776 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:02:03] 2025-06-04 04:19:14,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:02:03] 2025-06-04 04:19:14,902 [wrapper] pilotpid: 13287
[2025-06-04 10:02:03] 2025-06-04 04:19:15,002 [wrapper] Pilot exit status: 0
[2025-06-04 10:02:03] 2025-06-04 04:19:15,361 [wrapper] pandaids: 6677617918
[2025-06-04 10:02:03] 2025-06-04 04:19:16,267 [wrapper] cleanup supervisor_pilot 12869 13288
[2025-06-04 10:02:03] 2025-06-04 04:19:16,328 [wrapper] Test setup, not cleaning
[2025-06-04 10:02:03] 2025-06-04 04:19:16,381 [wrapper] apfmon messages muted
[2025-06-04 10:02:03] 2025-06-04 04:19:16,465 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:02:03] 2025-06-04 04:19:16,537 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:02:03]  *** Error codes and diagnostics ***
[2025-06-04 10:02:03]     "exeErrorCode": 0,
[2025-06-04 10:02:03]     "exeErrorDiag": "",
[2025-06-04 10:02:03]     "pilotErrorCode": 0,
[2025-06-04 10:02:03]     "pilotErrorDiag": "",
[2025-06-04 10:02:03]  *** Listing of results directory ***
[2025-06-04 10:02:03] total 392644
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:24 queuedata.json
[2025-06-04 10:02:03] -rwx------. 1 boinc boinc     37140 Jun  3 14:25 runpilot2-wrapper.sh
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:02:03] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:40 run_atlas
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:40 job.xml
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc      6393 Jun  4 02:40 init_data.xml
[2025-06-04 10:02:03] -rw-r--r--. 2 boinc boinc 216404361 Jun  4 02:40 EVNT.45006593._001296.pool.root.1
[2025-06-04 10:02:03] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:40 start_atlas.sh
[2025-06-04 10:02:03] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:40 shared
[2025-06-04 10:02:03] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:40 input.tar.gz
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:40 boinc_lockfile
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:42 pandaJob.out
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc    986069 Jun  4 02:45 agis_schedconf.cvmfs.json
[2025-06-04 10:02:03] drwx------. 4 boinc boinc      4096 Jun  4 02:45 pilot3
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc 178870467 Jun  4 06:16 HITS.45006595._032195.pool.root.1
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:16 boinc_task_state.xml
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc      1018 Jun  4 06:17 memory_monitor_summary.json
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc   1603667 Jun  4 06:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc    378820 Jun  4 06:17 log.45006595._032195.job.log.tgz.1
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc        95 Jun  4 06:18 pilot_heartbeat.json
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc      7690 Jun  4 06:18 heartbeat.json
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc      4417 Jun  4 06:19 pilotlog.txt
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc   1103957 Jun  4 06:19 log.45006595._032195.job.log.1
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc       357 Jun  4 06:19 output.list
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:19 runtime_log
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc   1505280 Jun  4 06:19 result.tar.gz
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc      8673 Jun  4 06:19 runtime_log.err
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc       656 Jun  4 06:19 dHGODmLtfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM3jKDmdn3oTm.diag
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:02 boinc_mmap_file
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:02 wrapper_checkpoint.txt
[2025-06-04 10:02:03] -rw-r--r--. 1 boinc boinc     20862 Jun  4 10:02 stderr.txt
[2025-06-04 10:02:03] HITS file was successfully produced:
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc 178870467 Jun  4 06:16 shared/HITS.pool.root.1
[2025-06-04 10:02:03]  *** Contents of shared directory: ***
[2025-06-04 10:02:03] total 388004
[2025-06-04 10:02:03] -rw-r--r--. 2 boinc boinc 216404361 Jun  4 02:40 ATLAS.root_0
[2025-06-04 10:02:03] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:40 start_atlas.sh
[2025-06-04 10:02:03] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:40 input.tar.gz
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc 178870467 Jun  4 06:16 HITS.pool.root.1
[2025-06-04 10:02:03] -rw-------. 1 boinc boinc   1505280 Jun  4 06:19 result.tar.gz
10:02:05 (5605): run_atlas exited; CPU time 44172.394366
10:02:05 (5605): called boinc_finish(0)

</stderr_txt>
]]>

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