Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:40:15 (999291): wrapper (7.7.26015): starting
01:40:15 (999291): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 01:40:15] Arguments: --nthreads 4
[2025-06-04 01:40:15] Threads: 4
[2025-06-04 01:40:15] Checking for CVMFS
[2025-06-04 01:40:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:40:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:40:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:40:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:40:16] 2.9.2.0 300232 1832 90800 146761 1 56 32010165 36864000 0 130560 0 1869792 99.993 446387 31048 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 01:40:16] CVMFS is ok
[2025-06-04 01:40:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:40:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:40:16] Further information can be found at the LHC@home message board.
[2025-06-04 01:40:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:40:16] Checking for apptainer binary...
[2025-06-04 01:40:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:40:16] Running /usr/bin/apptainer --version
[2025-06-04 01:40:16] apptainer version 1.3.6-6.1
[2025-06-04 01:40:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:40:16] thA338
[2025-06-04 01:40:16] apptainer works
[2025-06-04 01:40:16] Set ATHENA_PROC_NUMBER=4
[2025-06-04 01:40:16] Set ATHENA_CORE_NUMBER=4
[2025-06-04 01:40:16] Starting ATLAS job with PandaID=6677617949
[2025-06-04 01:40:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:47:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | wrong length of table data, x=[1748994048.0, 1748994109.0, 1748994170.0, 1748994231.0, 1748994292.0], y=[26164.0, 1323990.0, 1445664.0, 2363674.0, 2279973.0] (must
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | ..............................
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . Timing measurements:
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . get job = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . initial setup = 1 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . payload setup = 5 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . stage-in = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . payload execution = 292 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . stage-out = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . log creation = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | ..............................
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6677617949/pilotlog.txt
[2025-06-04 01:47:55] 2025-06-03 23:47:42,246 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-04 01:47:55] - Log from pilotlog.txt -
[2025-06-04 01:47:55] 2025-06-03 23:47:42,230 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 01:47:55] 2025-06-03 23:47:42,230 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677617949/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | INFO     | extracted standard info from prmon json
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | wrong length of table data, x=[1748994048.0, 1748994109.0, 1748994170.0, 1748994231.0, 1748994292.0], y=[26164.0, 1323990.0, 1445664.0, 2363674.0, 2279973.0] (must
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | ..............................
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . Timing measurements:
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . get job = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . initial setup = 1 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . payload setup = 5 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . stage-in = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . payload execution = 292 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . stage-out = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . log creation = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | ..............................
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6677617949/pilotlog.txt
[2025-06-04 01:47:55] 2025-06-03 23:47:42,246 | WARNING  | 
[2025-06-04 01:47:55] [begin log extracts]
[2025-06-04 01:47:55] - Log from pilotlog.txt -
[2025-06-04 01:47:55] 2025-06-03 23:47:42,230 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 01:47:55] 2025-06-03 23:47:42,230 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677617949/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | INFO     | extracted standard info from prmon json
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:47:55] 2025-06-03 23:47:42,231 | WARNING  | wrong length of table data, x=[1748994048.0, 1748994109.0, 1748994170.0, 1748994231.0, 1748994292.0], y=[26164.0, 1323990.0, 1445664.0, 2363674.0, 2279973.0] (must
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | ..............................
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . Timing measurements:
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . get job = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . initial setup = 1 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . payload setup = 5 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . stage-in = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . payload execution = 292 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . stage-out = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | . log creation = 0 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | ..............................
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-04 01:47:55] 2025-06-03 23:47:42,232 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6677617949/pilotlog.txt
[2025-06-04 01:47:55] [end log extracts]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,246 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-04 01:47:55] 2025-06-03 23:47:42,247 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | 
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | job summary report
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | --------------------------------------------------
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | PanDA job id: 6677617949
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | task id: 45006595
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 23:45:32,966 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | pilot state: failed 
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | transexitcode: 65
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | exeerrorcode: 65
[2025-06-04 01:47:55] 2025-06-03 23:47:42,718 | INFO     | exeerrordiag: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | exitcode: 65
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | exitmsg: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout."; P
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | cpuconsumptiontime: 186 s
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | nevents: 0
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | neventsw: 0
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | pid: 1009612
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | pgrp: 1009612
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | corecount: 4
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | event service: False
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | sizes: {0: 2405187, 4: 2405393, 11: 2405421, 302: 2431974, 303: 2436271, 424: 2436413}
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | --------------------------------------------------
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | 
[2025-06-04 01:47:55] 2025-06-03 23:47:42,719 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | job 6677617949 has completed (purged errors)
[2025-06-04 01:47:55] 2025-06-03 23:47:42,742 | INFO     | overall cleanup function is called
[2025-06-04 01:47:55] 2025-06-03 23:47:43,749 | INFO     | --- collectZombieJob: --- 10, [1009612]
[2025-06-04 01:47:55] 2025-06-03 23:47:43,749 | INFO     | zombie collector waiting for pid 1009612
[2025-06-04 01:47:55] 2025-06-03 23:47:43,749 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:47:55] 2025-06-03 23:47:43,749 | INFO     | collected zombie processes
[2025-06-04 01:47:55] 2025-06-03 23:47:43,749 | INFO     | will attempt to kill all subprocesses of pid=1009612
[2025-06-04 01:47:55] 2025-06-03 23:47:43,795 | INFO     | process IDs to be killed: [1009612] (in reverse order)
[2025-06-04 01:47:55] 2025-06-03 23:47:43,829 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:47:55] 2025-06-03 23:47:43,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:47:55] 2025-06-03 23:47:43,831 | INFO     | did not find any defunct processes belonging to 1009612
[2025-06-04 01:47:55] 2025-06-03 23:47:43,832 | INFO     | did not find any defunct processes belonging to 1009612
[2025-06-04 01:47:55] 2025-06-03 23:47:43,832 | INFO     | ready for new job
[2025-06-04 01:47:55] 2025-06-03 23:47:43,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:47:55] 2025-06-03 23:47:43,833 | INFO     | **************************************
[2025-06-04 01:47:55] 2025-06-03 23:47:43,833 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:47:55] 2025-06-03 23:47:43,833 | INFO     | **************************************
[2025-06-04 01:47:55] 2025-06-03 23:47:43,833 | INFO     | 
[2025-06-04 01:47:55] 2025-06-03 23:47:43,834 | INFO     | architecture information:
[2025-06-04 01:47:55] 2025-06-03 23:47:43,834 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:47:55] 2025-06-03 23:47:43,848 | INFO     | cat /etc/os-release:
[2025-06-04 01:47:55] NAME="CentOS Linux"
[2025-06-04 01:47:55] VERSION="7 (Core)"
[2025-06-04 01:47:55] ID="centos"
[2025-06-04 01:47:55] ID_LIKE="rhel fedora"
[2025-06-04 01:47:55] VERSION_ID="7"
[2025-06-04 01:47:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:47:55] ANSI_COLOR="0;31"
[2025-06-04 01:47:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:47:55] HOME_URL="https://www.centos.org/"
[2025-06-04 01:47:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:47:55] 
[2025-06-04 01:47:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:47:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:47:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:47:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:47:55] 
[2025-06-04 01:47:55] 2025-06-03 23:47:43,848 | INFO     | **************************************
[2025-06-04 01:47:55] 2025-06-03 23:47:44,352 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 01:47:55] 2025-06-03 23:47:44,370 | INFO     | sufficient remaining disk space (223087689728 B)
[2025-06-04 01:47:55] 2025-06-03 23:47:44,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | INFO     | update_server=False
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:47:55] 2025-06-03 23:47:44,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:47:55] 2025-06-03 23:47:44,434 | INFO     | all data control threads have been joined
[2025-06-04 01:47:55] 2025-06-03 23:47:44,864 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 01:47:55] 2025-06-03 23:47:44,864 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 01:47:55] 2025-06-03 23:47:44,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:47:55] 2025-06-03 23:47:44,865 | INFO     | will abort loop
[2025-06-04 01:47:55] 2025-06-03 23:47:45,059 | INFO     | all payload control threads have been joined
[2025-06-04 01:47:55] 2025-06-03 23:47:45,376 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:45,440 | INFO     | [data] control thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:45,444 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:45,785 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:45,870 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:45,973 | INFO     | all job control threads have been joined
[2025-06-04 01:47:55] 2025-06-03 23:47:46,065 | INFO     | [payload] control thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,079 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,377 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,690 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,768 | INFO     | [job] validate thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,849 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,866 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,866 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:46,979 | INFO     | [job] control thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:47,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:47:55] 2025-06-03 23:47:48,306 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:48,378 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:47:55] 2025-06-03 23:47:50,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033131059008)>', '<ExcThread(monitor, started 140031964473088)>']
[2025-06-04 01:47:55] 2025-06-03 23:47:50,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:47:55] 2025-06-03 23:47:50,404 | INFO     | [monitor] control thread has ended
[2025-06-04 01:47:55] 2025-06-03 23:47:55,243 | INFO     | all workflow threads have been joined
[2025-06-04 01:47:55] 2025-06-03 23:47:55,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:47:55] 2025-06-03 23:47:55,244 | INFO     | traces error code: 0
[2025-06-04 01:47:55] 2025-06-03 23:47:55,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:47:55] 2025-06-03 23:47:55,322 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:47:55] 2025-06-03 23:47:55,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:47:55] 2025-06-03 23:47:55,331 [wrapper] pilotpid: 1002994
[2025-06-04 01:47:55] 2025-06-03 23:47:55,335 [wrapper] Pilot exit status: 0
[2025-06-04 01:47:55] 2025-06-03 23:47:55,348 [wrapper] pandaids: 6677617949
[2025-06-04 01:47:55] 2025-06-03 23:47:55,370 [wrapper] cleanup supervisor_pilot 1003000 1002995
[2025-06-04 01:47:55] 2025-06-03 23:47:55,375 [wrapper] Test setup, not cleaning
[2025-06-04 01:47:55] 2025-06-03 23:47:55,379 [wrapper] apfmon messages muted
[2025-06-04 01:47:55] 2025-06-03 23:47:55,383 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:47:55] 2025-06-03 23:47:55,387 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:47:55]  *** Error codes and diagnostics ***
[2025-06-04 01:47:55]     "exeErrorCode": 65,
[2025-06-04 01:47:55]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possible memory leak: 'pss' slope: 8506.02 KB/s",
[2025-06-04 01:47:55]     "pilotErrorCode": 1305,
[2025-06-04 01:47:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possib",
[2025-06-04 01:47:55]  *** Listing of results directory ***
[2025-06-04 01:47:55] total 214440
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:24 queuedata.json
[2025-06-04 01:47:55] -rwx------ 1 boinc boinc     37140 Jun  3 14:25 runpilot2-wrapper.sh
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc       100 Jun  4 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:47:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 01:40 run_atlas
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc       105 Jun  4 01:40 job.xml
[2025-06-04 01:47:55] -rw-r--r-- 2 boinc boinc 215315478 Jun  4 01:40 EVNT.45006593._001297.pool.root.1
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc      6860 Jun  4 01:40 init_data.xml
[2025-06-04 01:47:55] drwxrwx--x 2 boinc boinc      4096 Jun  4 01:40 shared
[2025-06-04 01:47:55] -rw-r--r-- 2 boinc boinc    508884 Jun  4 01:40 input.tar.gz
[2025-06-04 01:47:55] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:40 start_atlas.sh
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc         0 Jun  4 01:40 boinc_lockfile
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc      2525 Jun  4 01:40 pandaJob.out
[2025-06-04 01:47:55] -rw------- 1 boinc boinc    986077 Jun  4 01:40 agis_schedconf.cvmfs.json
[2025-06-04 01:47:55] -rw------- 1 boinc boinc   1603667 Jun  4 01:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:47:55] drwx------ 4 boinc boinc      4096 Jun  4 01:40 pilot3
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc       526 Jun  4 01:45 boinc_task_state.xml
[2025-06-04 01:47:55] -rw------- 1 boinc boinc      1006 Jun  4 01:45 memory_monitor_summary.json
[2025-06-04 01:47:55] -rw------- 1 boinc boinc    122603 Jun  4 01:45 log.45006595._032226.job.log.tgz.1
[2025-06-04 01:47:55] -rw------- 1 boinc boinc        95 Jun  4 01:47 pilot_heartbeat.json
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc        24 Jun  4 01:47 wrapper_checkpoint.txt
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc      8192 Jun  4 01:47 boinc_mmap_file
[2025-06-04 01:47:55] -rw------- 1 boinc boinc      9782 Jun  4 01:47 heartbeat.json
[2025-06-04 01:47:55] -rw------- 1 boinc boinc      4666 Jun  4 01:47 pilotlog.txt
[2025-06-04 01:47:55] -rw------- 1 boinc boinc     95776 Jun  4 01:47 log.45006595._032226.job.log.1
[2025-06-04 01:47:55] -rw------- 1 boinc boinc       188 Jun  4 01:47 output.list
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc       620 Jun  4 01:47 runtime_log
[2025-06-04 01:47:55] -rw------- 1 boinc boinc    235520 Jun  4 01:47 result.tar.gz
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc      8580 Jun  4 01:47 runtime_log.err
[2025-06-04 01:47:55] -rw------- 1 boinc boinc       650 Jun  4 01:47 RIPLDmMtfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBbYKDmivbG1m.diag
[2025-06-04 01:47:55] -rw-r--r-- 1 boinc boinc     22386 Jun  4 01:47 stderr.txt
[2025-06-04 01:47:55] No HITS result produced
[2025-06-04 01:47:55]  *** Contents of shared directory: ***
[2025-06-04 01:47:55] total 211024
[2025-06-04 01:47:55] -rw-r--r-- 2 boinc boinc 215315478 Jun  4 01:40 ATLAS.root_0
[2025-06-04 01:47:55] -rw-r--r-- 2 boinc boinc    508884 Jun  4 01:40 input.tar.gz
[2025-06-04 01:47:55] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:40 start_atlas.sh
[2025-06-04 01:47:55] -rw------- 1 boinc boinc    235520 Jun  4 01:47 result.tar.gz
01:47:56 (999291): run_atlas exited; CPU time 176.519040
01:47:56 (999291): called boinc_finish(0)

</stderr_txt>
]]>

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