Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:29:10 (7420): wrapper (7.7.26015): starting
13:29:10 (7420): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 13:29:10] Arguments: --nthreads 12
[2025-06-03 13:29:10] Threads: 12
[2025-06-03 13:29:10] Checking for CVMFS
[2025-06-03 13:29:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 13:29:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 13:29:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 13:29:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 13:29:10] 2.10.0.0 29567 1430 97276 146752 3 59 14290465 16777216 94 130560 0 5724855 99.998 386737 7003 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-06-03 13:29:10] CVMFS is ok
[2025-06-03 13:29:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 13:29:10] Checking for apptainer binary...
[2025-06-03 13:29:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 13:29:10] Running /usr/bin/apptainer --version
[2025-06-03 13:29:10] apptainer version 1.3.6-150600.4.9.1
[2025-06-03 13:29:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 13:29:10] boinc-runner
[2025-06-03 13:29:10] apptainer works
[2025-06-03 13:29:10] Set ATHENA_PROC_NUMBER=12
[2025-06-03 13:29:10] Set ATHENA_CORE_NUMBER=12
[2025-06-03 13:29:10] Starting ATLAS job with PandaID=6677579567
[2025-06-03 13:29:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:54:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:54:12]  is_altstaged=None
[2025-06-03 13:54:12]  is_tar=False
[2025-06-03 13:54:12]  lfn=log.45006595._029900.job.log.tgz.1
[2025-06-03 13:54:12]  mtime=0
[2025-06-03 13:54:12]  protocol_id=None
[2025-06-03 13:54:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 13:54:12]  replicas=None
[2025-06-03 13:54:12]  scope=mc23_13p6TeV
[2025-06-03 13:54:12]  status=None
[2025-06-03 13:54:12]  status_code=0
[2025-06-03 13:54:12]  storage_token=
[2025-06-03 13:54:12]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6677579567/log.45006595._029900.job.log.tgz.1
[2025-06-03 13:54:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/dc/log.45006595._029900.job.log.tgz.1
[2025-06-03 13:54:12]  workdir=None
[2025-06-03 13:54:12] ]
[2025-06-03 13:54:12] 2025-06-03 18:53:45,510 | INFO     | transferring file log.45006595._029900.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6677579567/log.45006595._029900.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-03 13:54:12] 2025-06-03 18:53:45,510 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6677579567/log.45006595._029900.job.log.tgz.1 /var/lib/boinc/slots/1/log.45006595._029900.job
[2025-06-03 13:54:12] 2025-06-03 18:53:45,521 | INFO     | adding to output.list: log.45006595._029900.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/dc/log.45006595._029900.job.log.tg
[2025-06-03 13:54:12] 2025-06-03 18:53:45,522 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 13:54:12] 2025-06-03 18:53:45,522 | INFO     | summary of transferred files:
[2025-06-03 13:54:12] 2025-06-03 18:53:45,522 | INFO     |  -- lfn=log.45006595._029900.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 13:54:12] 2025-06-03 18:53:45,522 | INFO     | stage-out finished correctly
[2025-06-03 13:54:12] 2025-06-03 18:53:47,008 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 13:54:12] 2025-06-03 18:53:47,196 | INFO     | monitor loop #118: job 0:6677579567 is in state 'finished'
[2025-06-03 13:54:12] 2025-06-03 18:53:47,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:54:12] 2025-06-03 18:53:48,971 | INFO     | job 6677579567 has state=finished
[2025-06-03 13:54:12] 2025-06-03 18:53:48,972 | INFO     | preparing for final server update for job 6677579567 in state='finished'
[2025-06-03 13:54:12] 2025-06-03 18:53:48,972 | INFO     | this job has now completed (state=finished)
[2025-06-03 13:54:12] 2025-06-03 18:53:48,972 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 13:54:12] 2025-06-03 18:53:48,972 | INFO     | log transfer has been attempted: DONE
[2025-06-03 13:54:12] 2025-06-03 18:53:48,972 | INFO     | job 6677579567 has finished - writing final server update
[2025-06-03 13:54:12] 2025-06-03 18:53:48,972 | INFO     | total number of processed events: 400 (read)
[2025-06-03 13:54:12] 2025-06-03 18:53:48,974 | INFO     | executing command: lscpu
[2025-06-03 13:54:12] 2025-06-03 18:53:48,993 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:54:12] 2025-06-03 18:53:49,698 | INFO     | monitor loop #119: job 0:6677579567 is in state 'finished'
[2025-06-03 13:54:12] 2025-06-03 18:53:49,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,201 | INFO     | monitor loop #120: job 0:6677579567 is in state 'finished'
[2025-06-03 13:54:12] 2025-06-03 18:53:52,201 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,755 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 13:54:12] 2025-06-03 18:53:52,755 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6677579567/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,756 | INFO     | extracted standard info from prmon json
[2025-06-03 13:54:12] 2025-06-03 18:53:52,756 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:54:12] 2025-06-03 18:53:52,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:54:12] 2025-06-03 18:53:52,756 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:54:12] 2025-06-03 18:53:52,756 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | sum of square deviations: 1518168.0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | sum of deviations: 31959608.0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | mean x: 1748976169.0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | mean y: 2907554.1764705884
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | -- intersect: -36815542553.17776
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | intersect: -36815542553.17776
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | chi2: 1.3101671471528494e-05
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | -- intersect: -36815542553.17776
[2025-06-03 13:54:12] 2025-06-03 18:53:52,757 | INFO     | current memory leak: 21.05 B/s (using 17 data points, chi2=0.00)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | ..............................
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . Timing measurements:
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . get job = 0 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . initial setup = 2 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . payload setup = 3 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . stage-in = 0 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . payload execution = 1448 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . stage-out = 0 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | . log creation = 0 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,758 | INFO     | ..............................
[2025-06-03 13:54:12] 2025-06-03 18:53:52,786 | INFO     | 
[2025-06-03 13:54:12] 2025-06-03 18:53:52,786 | INFO     | job summary report
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | --------------------------------------------------
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | PanDA job id: 6677579567
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | task id: 45006595
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | errors: (none)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | pilot state: finished 
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | transexitcode: 0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | exeerrorcode: 0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | exeerrordiag: 
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | exitcode: 0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | exitmsg: OK
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | cpuconsumptiontime: 15906 s
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | nevents: 400
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | neventsw: 0
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | pid: 29788
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | pgrp: 29788
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | corecount: 12
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | event service: False
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | sizes: {0: 2405178, 2: 2405384, 11: 2405412, 1455: 2439081, 1457: 2439081, 1463: 2439251}
[2025-06-03 13:54:12] 2025-06-03 18:53:52,787 | INFO     | --------------------------------------------------
[2025-06-03 13:54:12] 2025-06-03 18:53:52,788 | INFO     | 
[2025-06-03 13:54:12] 2025-06-03 18:53:52,788 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-03 13:54:12] 2025-06-03 18:53:52,800 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,802 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:54:12] 2025-06-03 18:53:52,802 | INFO     | job 6677579567 has completed (purged errors)
[2025-06-03 13:54:12] 2025-06-03 18:53:52,802 | INFO     | overall cleanup function is called
[2025-06-03 13:54:12] 2025-06-03 18:53:53,810 | INFO     | --- collectZombieJob: --- 10, [29788]
[2025-06-03 13:54:12] 2025-06-03 18:53:53,810 | INFO     | zombie collector waiting for pid 29788
[2025-06-03 13:54:12] 2025-06-03 18:53:53,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:54:12] 2025-06-03 18:53:53,810 | INFO     | collected zombie processes
[2025-06-03 13:54:12] 2025-06-03 18:53:53,810 | INFO     | will attempt to kill all subprocesses of pid=29788
[2025-06-03 13:54:12] 2025-06-03 18:53:53,848 | INFO     | process IDs to be killed: [29788] (in reverse order)
[2025-06-03 13:54:12] 2025-06-03 18:53:53,870 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:54:12] 2025-06-03 18:53:53,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:54:12] 2025-06-03 18:53:53,873 | INFO     | did not find any defunct processes belonging to 29788
[2025-06-03 13:54:12] 2025-06-03 18:53:53,876 | INFO     | did not find any defunct processes belonging to 29788
[2025-06-03 13:54:12] 2025-06-03 18:53:53,877 | INFO     | ready for new job
[2025-06-03 13:54:12] 2025-06-03 18:53:53,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:54:12] 2025-06-03 18:53:53,878 | INFO     | **************************************
[2025-06-03 13:54:12] 2025-06-03 18:53:53,878 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:54:12] 2025-06-03 18:53:53,878 | INFO     | **************************************
[2025-06-03 13:54:12] 2025-06-03 18:53:53,879 | INFO     | 
[2025-06-03 13:54:12] 2025-06-03 18:53:53,880 | INFO     | architecture information:
[2025-06-03 13:54:12] 2025-06-03 18:53:53,880 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:54:12] 2025-06-03 18:53:53,890 | INFO     | cat /etc/os-release:
[2025-06-03 13:54:12] NAME="CentOS Linux"
[2025-06-03 13:54:12] VERSION="7 (Core)"
[2025-06-03 13:54:12] ID="centos"
[2025-06-03 13:54:12] ID_LIKE="rhel fedora"
[2025-06-03 13:54:12] VERSION_ID="7"
[2025-06-03 13:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:54:12] ANSI_COLOR="0;31"
[2025-06-03 13:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:54:12] HOME_URL="https://www.centos.org/"
[2025-06-03 13:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:54:12] 
[2025-06-03 13:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:54:12] 
[2025-06-03 13:54:12] 2025-06-03 18:53:53,890 | INFO     | **************************************
[2025-06-03 13:54:12] 2025-06-03 18:53:54,393 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | INFO     | sufficient remaining disk space (3889817452544 B)
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | INFO     | update_server=False
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:54:12] 2025-06-03 18:53:54,402 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:54:12] 2025-06-03 18:53:54,531 | INFO     | all data control threads have been joined
[2025-06-03 13:54:12] 2025-06-03 18:53:54,704 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:54:12] 2025-06-03 18:53:54,704 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:54:12] 2025-06-03 18:53:54,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:54:12] 2025-06-03 18:53:54,704 | INFO     | will abort loop
[2025-06-03 13:54:12] 2025-06-03 18:53:54,932 | INFO     | all job control threads have been joined
[2025-06-03 13:54:12] 2025-06-03 18:53:55,121 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:54:12] 2025-06-03 18:53:55,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:54:12] 2025-06-03 18:53:55,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:54:12] 2025-06-03 18:53:55,200 | INFO     | all payload control threads have been joined
[2025-06-03 13:54:12] 2025-06-03 18:53:55,407 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:55,408 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:55,536 | INFO     | [data] control thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:55,710 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:55,876 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:55,895 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:55,937 | INFO     | [job] control thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,205 | INFO     | [payload] control thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,408 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,422 | INFO     | [job] validate thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,570 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,623 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,750 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:56,821 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:53:57,545 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:54:12] 2025-06-03 18:54:01,551 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:54:04,695 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:54:12] 2025-06-03 18:54:05,700 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:54:12] 2025-06-03 18:54:07,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963881310016)>', '<ExcThread(monitor, started 139963119171328)>']
[2025-06-03 13:54:12] 2025-06-03 18:54:08,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:54:12] 2025-06-03 18:54:08,187 | INFO     | [monitor] control thread has ended
[2025-06-03 13:54:12] 2025-06-03 18:54:12,534 | INFO     | all workflow threads have been joined
[2025-06-03 13:54:12] 2025-06-03 18:54:12,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:54:12] 2025-06-03 18:54:12,534 | INFO     | traces error code: 0
[2025-06-03 13:54:12] 2025-06-03 18:54:12,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:54:12] 2025-06-03 18:54:12,574 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:54:12] 2025-06-03 18:54:12,576 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:54:12] 2025-06-03 18:54:12,577 [wrapper] pilotpid: 11852
[2025-06-03 13:54:12] 2025-06-03 18:54:12,579 [wrapper] Pilot exit status: 0
[2025-06-03 13:54:12] 2025-06-03 18:54:12,585 [wrapper] pandaids: 6677579567
[2025-06-03 13:54:12] 2025-06-03 18:54:12,597 [wrapper] cleanup supervisor_pilot 13408 11853
[2025-06-03 13:54:12] 2025-06-03 18:54:12,599 [wrapper] Test setup, not cleaning
[2025-06-03 13:54:12] 2025-06-03 18:54:12,601 [wrapper] apfmon messages muted
[2025-06-03 13:54:12] 2025-06-03 18:54:12,603 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:54:12] 2025-06-03 18:54:12,605 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:54:12]  *** Error codes and diagnostics ***
[2025-06-03 13:54:12]     "exeErrorCode": 0,
[2025-06-03 13:54:12]     "exeErrorDiag": "",
[2025-06-03 13:54:12]     "pilotErrorCode": 0,
[2025-06-03 13:54:12]     "pilotErrorDiag": "",
[2025-06-03 13:54:12]  *** Listing of results directory ***
[2025-06-03 13:54:12] total 388024
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc    495897 Jun  3 05:57 pilot3.tar.gz
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc      5111 Jun  3 06:06 queuedata.json
[2025-06-03 13:54:12] -rwx------ 1 boinc boinc     37140 Jun  3 06:06 runpilot2-wrapper.sh
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc       100 Jun  3 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:54:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 13:29 run_atlas
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc       105 Jun  3 13:29 job.xml
[2025-06-03 13:54:12] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:29 start_atlas.sh
[2025-06-03 13:54:12] drwxrwx--x 1 boinc boinc        76 Jun  3 13:29 shared
[2025-06-03 13:54:12] -rw-r--r-- 2 boinc boinc    508877 Jun  3 13:29 input.tar.gz
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc     10044 Jun  3 13:29 init_data.xml
[2025-06-03 13:54:12] -rw-r--r-- 2 boinc boinc 217939621 Jun  3 13:29 EVNT.45006593._001197.pool.root.1
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc         0 Jun  3 13:29 boinc_lockfile
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc      2522 Jun  3 13:29 pandaJob.out
[2025-06-03 13:54:12] -rw------- 1 boinc boinc    986893 Jun  3 13:29 agis_schedconf.cvmfs.json
[2025-06-03 13:54:12] -rw------- 1 boinc boinc   1603667 Jun  3 13:29 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:54:12] drwx------ 1 boinc boinc       368 Jun  3 13:29 pilot3
[2025-06-03 13:54:12] -rw------- 1 boinc boinc        95 Jun  3 13:53 pilot_heartbeat.json
[2025-06-03 13:54:12] -rw------- 1 boinc boinc 174572043 Jun  3 13:53 HITS.45006595._029900.pool.root.1
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc       529 Jun  3 13:53 boinc_task_state.xml
[2025-06-03 13:54:12] -rw------- 1 boinc boinc      1023 Jun  3 13:53 memory_monitor_summary.json
[2025-06-03 13:54:12] -rw------- 1 boinc boinc    315897 Jun  3 13:53 log.45006595._029900.job.log.tgz.1
[2025-06-03 13:54:12] -rw------- 1 boinc boinc      7679 Jun  3 13:53 heartbeat.json
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc      8192 Jun  3 13:54 boinc_mmap_file
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc        27 Jun  3 13:54 wrapper_checkpoint.txt
[2025-06-03 13:54:12] -rw------- 1 boinc boinc      4613 Jun  3 13:54 pilotlog.txt
[2025-06-03 13:54:12] -rw------- 1 boinc boinc    183801 Jun  3 13:54 log.45006595._029900.job.log.1
[2025-06-03 13:54:12] -rw------- 1 boinc boinc       357 Jun  3 13:54 output.list
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc       620 Jun  3 13:54 runtime_log
[2025-06-03 13:54:12] -rw------- 1 boinc boinc    522240 Jun  3 13:54 result.tar.gz
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc      8683 Jun  3 13:54 runtime_log.err
[2025-06-03 13:54:12] -rw------- 1 boinc boinc       651 Jun  3 13:54 NYANDm8deg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxdjKDmvt8V6m.diag
[2025-06-03 13:54:12] -rw-r--r-- 1 boinc boinc     21020 Jun  3 13:54 stderr.txt
[2025-06-03 13:54:12] HITS file was successfully produced:
[2025-06-03 13:54:12] -rw------- 1 boinc boinc 174572043 Jun  3 13:53 shared/HITS.pool.root.1
[2025-06-03 13:54:12]  *** Contents of shared directory: ***
[2025-06-03 13:54:12] total 384344
[2025-06-03 13:54:12] -rw-r--r-- 2 boinc boinc     15093 Jun  3 13:29 start_atlas.sh
[2025-06-03 13:54:12] -rw-r--r-- 2 boinc boinc    508877 Jun  3 13:29 input.tar.gz
[2025-06-03 13:54:12] -rw-r--r-- 2 boinc boinc 217939621 Jun  3 13:29 ATLAS.root_0
[2025-06-03 13:54:12] -rw------- 1 boinc boinc 174572043 Jun  3 13:53 HITS.pool.root.1
[2025-06-03 13:54:12] -rw------- 1 boinc boinc    522240 Jun  3 13:54 result.tar.gz
13:54:13 (7420): run_atlas exited; CPU time 15914.321708
13:54:13 (7420): called boinc_finish(0)

</stderr_txt>
]]>

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