Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:02:41 (10434): wrapper (7.7.26015): starting
01:02:41 (10434): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:02:41] Arguments: --nthreads 8
[2025-06-04 01:02:41] Threads: 8
[2025-06-04 01:02:41] Checking for CVMFS
[2025-06-04 01:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:02:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:02:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:02:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:02:44] 2.11.2.0 31392 32415 95680 146760 3 111 13182470 25165824 3900 130560 0 17193803 99.767 19847758 2037 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:02:44] CVMFS is ok
[2025-06-04 01:02:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:02:44] Checking for apptainer binary...
[2025-06-04 01:02:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:02:44] Running /usr/bin/apptainer --version
[2025-06-04 01:02:45] apptainer version 1.3.2-1.el7
[2025-06-04 01:02:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:12:39] cg-vwn267.simple-grid.lan
[2025-06-04 01:12:39] apptainer works
[2025-06-04 01:12:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:12:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:12:39] Starting ATLAS job with PandaID=6677617281
[2025-06-04 01:12:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:03:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:03:29] 2025-06-04 03:05:08,836 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:03:29] 2025-06-04 03:05:08,836 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:03:29] 2025-06-04 03:05:08,837 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:03:29] 2025-06-04 03:05:08,842 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:03:29] 2025-06-04 03:05:08,843 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,845 | INFO     | sum of deviations: 11126366511.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,845 | INFO     | mean x: 1748999619.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,845 | INFO     | mean y: 2466226.5483870967
[2025-06-04 07:03:29] 2025-06-04 03:05:08,845 | INFO     | -- intersect: -6139319688.630854
[2025-06-04 07:03:29] 2025-06-04 03:05:08,845 | INFO     | intersect: -6139319688.630854
[2025-06-04 07:03:29] 2025-06-04 03:05:08,846 | INFO     | chi2: 7.2791406226067785
[2025-06-04 07:03:29] 2025-06-04 03:05:08,846 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,848 | INFO     | sum of deviations: 40384039565.5
[2025-06-04 07:03:29] 2025-06-04 03:05:08,848 | INFO     | mean x: 1748999466.5
[2025-06-04 07:03:29] 2025-06-04 03:05:08,848 | INFO     | mean y: 2486785.570754717
[2025-06-04 07:03:29] 2025-06-04 03:05:08,848 | INFO     | -- intersect: -23904403699.14864
[2025-06-04 07:03:29] 2025-06-04 03:05:08,849 | INFO     | intersect: -23904403699.14864
[2025-06-04 07:03:29] 2025-06-04 03:05:08,849 | INFO     | chi2: 5.752998062108266
[2025-06-04 07:03:29] 2025-06-04 03:05:08,849 | INFO     | current chi2=5.752998062108266 (change=20.965971666473674 %)
[2025-06-04 07:03:29] 2025-06-04 03:05:08,849 | INFO     | right removable region: 211
[2025-06-04 07:03:29] 2025-06-04 03:05:08,850 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,851 | INFO     | sum of deviations: -63616620314.99999
[2025-06-04 07:03:29] 2025-06-04 03:05:08,852 | INFO     | mean x: 1748999771.5
[2025-06-04 07:03:29] 2025-06-04 03:05:08,852 | INFO     | mean y: 2519436.169811321
[2025-06-04 07:03:29] 2025-06-04 03:05:08,852 | INFO     | -- intersect: 37662839118.415794
[2025-06-04 07:03:29] 2025-06-04 03:05:08,852 | INFO     | intersect: 37662839118.415794
[2025-06-04 07:03:29] 2025-06-04 03:05:08,852 | INFO     | chi2: 2.6467352946496847
[2025-06-04 07:03:29] 2025-06-04 03:05:08,853 | INFO     | current chi2=2.6467352946496847 (change=63.639453723015926 %)
[2025-06-04 07:03:29] 2025-06-04 03:05:08,853 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,855 | INFO     | sum of deviations: -87959675107.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,855 | INFO     | mean x: 1748999924.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,855 | INFO     | mean y: 2537451.782608696
[2025-06-04 07:03:29] 2025-06-04 03:05:08,855 | INFO     | -- intersect: 55938882086.64558
[2025-06-04 07:03:29] 2025-06-04 03:05:08,855 | INFO     | intersect: 55938882086.64558
[2025-06-04 07:03:29] 2025-06-04 03:05:08,856 | INFO     | chi2: 1.8827524418363517
[2025-06-04 07:03:29] 2025-06-04 03:05:08,856 | INFO     | current chi2=1.8827524418363517 (change=28.86510239077202 %)
[2025-06-04 07:03:29] 2025-06-04 03:05:08,856 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 07:03:29] 2025-06-04 03:05:08,858 | INFO     | sum of deviations: -83415584905.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,858 | INFO     | mean x: 1749000076.5
[2025-06-04 07:03:29] 2025-06-04 03:05:08,858 | INFO     | mean y: 2533873.574257426
[2025-06-04 07:03:29] 2025-06-04 03:05:08,858 | INFO     | -- intersect: 57086631355.69745
[2025-06-04 07:03:29] 2025-06-04 03:05:08,858 | INFO     | intersect: 57086631355.69745
[2025-06-04 07:03:29] 2025-06-04 03:05:08,859 | INFO     | chi2: 1.8822530741258792
[2025-06-04 07:03:29] 2025-06-04 03:05:08,859 | INFO     | current chi2=1.8822530741258792 (change=0.026523280457704877 %)
[2025-06-04 07:03:29] 2025-06-04 03:05:08,859 | INFO     | left removable region: 30
[2025-06-04 07:03:29] 2025-06-04 03:05:08,859 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,861 | INFO     | sum of deviations: -37108470136.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,861 | INFO     | mean x: 1749000351.0
[2025-06-04 07:03:29] 2025-06-04 03:05:08,861 | INFO     | mean y: 2542629.8121546963
[2025-06-04 07:03:29] 2025-06-04 03:05:08,861 | INFO     | -- intersect: 35301514392.72804
[2025-06-04 07:03:29] 2025-06-04 03:05:08,861 | INFO     | intersect: 35301514392.72804
[2025-06-04 07:03:29] 2025-06-04 03:05:08,862 | INFO     | chi2: 0.1793262404317447
[2025-06-04 07:03:29] 2025-06-04 03:05:08,862 | INFO     | -- intersect: 35301514392.72804
[2025-06-04 07:03:29] 2025-06-04 03:05:08,862 | INFO     | current memory leak: -20.18 B/s (using 181 data points, chi2=0.18)
[2025-06-04 07:03:29] 2025-06-04 03:05:08,863 | INFO     | ..............................
[2025-06-04 07:03:29] 2025-06-04 03:05:08,863 | INFO     | . Timing measurements:
[2025-06-04 07:03:29] 2025-06-04 03:05:08,863 | INFO     | . get job = 0 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,863 | INFO     | . initial setup = 6 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,863 | INFO     | . payload setup = 146 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,864 | INFO     | . stage-in = 0 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,864 | INFO     | . payload execution = 13334 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,864 | INFO     | . stage-out = 4 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,864 | INFO     | . log creation = 1 s
[2025-06-04 07:03:29] 2025-06-04 03:05:08,864 | INFO     | ..............................
[2025-06-04 07:03:29] 2025-06-04 03:05:09,301 | INFO     | 
[2025-06-04 07:03:29] 2025-06-04 03:05:09,301 | INFO     | job summary report
[2025-06-04 07:03:29] 2025-06-04 03:05:09,301 | INFO     | --------------------------------------------------
[2025-06-04 07:03:29] 2025-06-04 03:05:09,301 | INFO     | PanDA job id: 6677617281
[2025-06-04 07:03:29] 2025-06-04 03:05:09,301 | INFO     | task id: 45006595
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | errors: (none)
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | pilot state: finished 
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | transexitcode: 0
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | exeerrorcode: 0
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | exeerrordiag: 
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | exitcode: 0
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | exitmsg: OK
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | cpuconsumptiontime: 48635 s
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | nevents: 400
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | neventsw: 0
[2025-06-04 07:03:29] 2025-06-04 03:05:09,302 | INFO     | pid: 2738
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | pgrp: 2738
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | corecount: 8
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | event service: False
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 23: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 66: 2405536, 77: 2405564, 88: 2405620, 93: 2406134, 99
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | --------------------------------------------------
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | 
[2025-06-04 07:03:29] 2025-06-04 03:05:09,303 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 07:03:29] 2025-06-04 03:05:09,651 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:03:29] 2025-06-04 03:05:09,654 | INFO     | job 6677617281 has completed (purged errors)
[2025-06-04 07:03:29] 2025-06-04 03:05:09,654 | INFO     | overall cleanup function is called
[2025-06-04 07:03:29] 2025-06-04 03:05:10,669 | INFO     | --- collectZombieJob: --- 10, [2738]
[2025-06-04 07:03:29] 2025-06-04 03:05:10,669 | INFO     | zombie collector waiting for pid 2738
[2025-06-04 07:03:29] 2025-06-04 03:05:10,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:03:29] 2025-06-04 03:05:10,670 | INFO     | collected zombie processes
[2025-06-04 07:03:29] 2025-06-04 03:05:10,670 | INFO     | will attempt to kill all subprocesses of pid=2738
[2025-06-04 07:03:29] 2025-06-04 03:05:10,802 | INFO     | process IDs to be killed: [2738] (in reverse order)
[2025-06-04 07:03:29] 2025-06-04 03:05:10,903 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:03:29] 2025-06-04 03:05:10,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:03:29] 2025-06-04 03:05:10,907 | INFO     | did not find any defunct processes belonging to 2738
[2025-06-04 07:03:29] 2025-06-04 03:05:10,910 | INFO     | did not find any defunct processes belonging to 2738
[2025-06-04 07:03:29] 2025-06-04 03:05:10,911 | INFO     | ready for new job
[2025-06-04 07:03:29] 2025-06-04 03:05:10,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:03:29] 2025-06-04 03:05:10,913 | INFO     | **************************************
[2025-06-04 07:03:29] 2025-06-04 03:05:10,914 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:03:29] 2025-06-04 03:05:10,914 | INFO     | **************************************
[2025-06-04 07:03:29] 2025-06-04 03:05:10,914 | INFO     | 
[2025-06-04 07:03:29] 2025-06-04 03:05:10,915 | INFO     | pilot is running in a VM
[2025-06-04 07:03:29] 2025-06-04 03:05:10,915 | INFO     | architecture information:
[2025-06-04 07:03:29] 2025-06-04 03:05:10,915 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:03:29] 2025-06-04 03:05:11,059 | INFO     | cat /etc/os-release:
[2025-06-04 07:03:29] NAME="CentOS Linux"
[2025-06-04 07:03:29] VERSION="7 (Core)"
[2025-06-04 07:03:29] ID="centos"
[2025-06-04 07:03:29] ID_LIKE="rhel fedora"
[2025-06-04 07:03:29] VERSION_ID="7"
[2025-06-04 07:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:03:29] ANSI_COLOR="0;31"
[2025-06-04 07:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:03:29] HOME_URL="https://www.centos.org/"
[2025-06-04 07:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:03:29] 
[2025-06-04 07:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:03:29] 
[2025-06-04 07:03:29] 2025-06-04 03:05:11,060 | INFO     | **************************************
[2025-06-04 07:03:29] 2025-06-04 03:05:11,563 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 07:03:29] 2025-06-04 03:05:11,773 | INFO     | sufficient remaining disk space (497112055808 B)
[2025-06-04 07:03:29] 2025-06-04 03:05:11,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:03:29] 2025-06-04 03:05:11,774 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:03:29] 2025-06-04 03:05:11,774 | INFO     | update_server=False
[2025-06-04 07:03:29] 2025-06-04 03:05:11,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:03:29] 2025-06-04 03:05:11,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:03:29] 2025-06-04 03:05:11,777 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:03:29] 2025-06-04 03:05:11,778 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:03:29] 2025-06-04 03:05:11,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:03:29] 2025-06-04 03:05:11,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:03:29] 2025-06-04 03:05:11,818 | INFO     | all job control threads have been joined
[2025-06-04 07:03:29] 2025-06-04 03:05:11,930 | INFO     | all payload control threads have been joined
[2025-06-04 07:03:29] 2025-06-04 03:05:12,144 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 07:03:29] 2025-06-04 03:05:12,144 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 07:03:29] 2025-06-04 03:05:12,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:03:29] 2025-06-04 03:05:12,144 | INFO     | will abort loop
[2025-06-04 07:03:29] 2025-06-04 03:05:12,309 | INFO     | all data control threads have been joined
[2025-06-04 07:03:29] 2025-06-04 03:05:12,780 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:12,823 | INFO     | [job] control thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:12,860 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:12,936 | INFO     | [payload] control thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:13,082 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:13,149 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:13,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:03:29] 2025-06-04 03:05:13,213 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:13,314 | INFO     | [data] control thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:13,805 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:13,879 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:14,014 | INFO     | [job] validate thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:14,025 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:14,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:03:29] 2025-06-04 03:05:14,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:15,033 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:15,191 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:15,783 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:03:29] 2025-06-04 03:05:16,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966701049664)>', '<ExcThread(monitor, started 139966130677504)>']
[2025-06-04 07:03:29] 2025-06-04 03:05:16,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:03:29] 2025-06-04 03:05:16,809 | INFO     | [monitor] control thread has ended
[2025-06-04 07:03:29] 2025-06-04 03:05:21,449 | INFO     | all workflow threads have been joined
[2025-06-04 07:03:29] 2025-06-04 03:05:21,449 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:03:29] 2025-06-04 03:05:21,450 | INFO     | traces error code: 0
[2025-06-04 07:03:29] 2025-06-04 03:05:21,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:03:29] 2025-06-04 03:05:21,812 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:03:29] 2025-06-04 03:05:21,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:03:29] 2025-06-04 03:05:21,869 [wrapper] pilotpid: 25391
[2025-06-04 07:03:29] 2025-06-04 03:05:21,895 [wrapper] Pilot exit status: 0
[2025-06-04 07:03:29] 2025-06-04 03:05:22,307 [wrapper] pandaids: 6677617281
[2025-06-04 07:03:29] 2025-06-04 03:05:23,059 [wrapper] cleanup supervisor_pilot 11741 25392
[2025-06-04 07:03:29] 2025-06-04 03:05:23,152 [wrapper] Test setup, not cleaning
[2025-06-04 07:03:29] 2025-06-04 03:05:23,254 [wrapper] apfmon messages muted
[2025-06-04 07:03:29] 2025-06-04 03:05:23,372 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:03:29] 2025-06-04 03:05:23,430 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:03:29]  *** Error codes and diagnostics ***
[2025-06-04 07:03:29]     "exeErrorCode": 0,
[2025-06-04 07:03:29]     "exeErrorDiag": "",
[2025-06-04 07:03:29]     "pilotErrorCode": 0,
[2025-06-04 07:03:29]     "pilotErrorDiag": "",
[2025-06-04 07:03:29]  *** Listing of results directory ***
[2025-06-04 07:03:29] total 385356
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 07:03:29] -rwx------. 1 boinc boinc     37140 Jun  3 14:15 runpilot2-wrapper.sh
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:15 queuedata.json
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:03:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:02 run_atlas
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:02 job.xml
[2025-06-04 07:03:29] -rw-r--r--. 2 boinc boinc 214988473 Jun  4 01:02 EVNT.45006593._001284.pool.root.1
[2025-06-04 07:03:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:02 start_atlas.sh
[2025-06-04 07:03:29] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:02 shared
[2025-06-04 07:03:29] -rw-r--r--. 2 boinc boinc    508881 Jun  4 01:02 input.tar.gz
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc      6391 Jun  4 01:02 init_data.xml
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:02 boinc_lockfile
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc      2525 Jun  4 01:12 pandaJob.out
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc    986861 Jun  4 01:15 agis_schedconf.cvmfs.json
[2025-06-04 07:03:29] drwx------. 4 boinc boinc      4096 Jun  4 01:15 pilot3
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc 172675830 Jun  4 05:02 HITS.45006595._031908.pool.root.1
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:02 boinc_task_state.xml
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc      1016 Jun  4 05:03 memory_monitor_summary.json
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc   1603667 Jun  4 05:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc    386447 Jun  4 05:03 log.45006595._031908.job.log.tgz.1
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc        95 Jun  4 05:05 pilot_heartbeat.json
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc      7694 Jun  4 05:05 heartbeat.json
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc      4725 Jun  4 05:05 pilotlog.txt
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc   1174924 Jun  4 05:05 log.45006595._031908.job.log.1
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc       357 Jun  4 05:05 output.list
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:05 runtime_log
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc   1576960 Jun  4 05:05 result.tar.gz
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc       657 Jun  4 05:05 gAWNDmOjfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMzjKDm5DIIWm.diag
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:05 runtime_log.err
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:03 boinc_mmap_file
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc        28 Jun  4 07:03 wrapper_checkpoint.txt
[2025-06-04 07:03:29] -rw-r--r--. 1 boinc boinc     20515 Jun  4 07:03 stderr.txt
[2025-06-04 07:03:29] HITS file was successfully produced:
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc 172675830 Jun  4 05:02 shared/HITS.pool.root.1
[2025-06-04 07:03:29]  *** Contents of shared directory: ***
[2025-06-04 07:03:29] total 380640
[2025-06-04 07:03:29] -rw-r--r--. 2 boinc boinc 214988473 Jun  4 01:02 ATLAS.root_0
[2025-06-04 07:03:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:02 start_atlas.sh
[2025-06-04 07:03:29] -rw-r--r--. 2 boinc boinc    508881 Jun  4 01:02 input.tar.gz
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc 172675830 Jun  4 05:02 HITS.pool.root.1
[2025-06-04 07:03:29] -rw-------. 1 boinc boinc   1576960 Jun  4 05:05 result.tar.gz
07:03:31 (10434): run_atlas exited; CPU time 48828.517972
07:03:31 (10434): called boinc_finish(0)

</stderr_txt>
]]>

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