Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:20:33 (745099): wrapper (7.7.26015): starting
20:20:33 (745099): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 20:20:33] Arguments: --nthreads 3
[2025-06-04 20:20:33] Threads: 3
[2025-06-04 20:20:33] Checking for CVMFS
[2025-06-04 20:20:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:20:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:20:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:20:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:20:38] 2.11.5.0 718525 108 53408 146778 0 56 44507026 52428800 0 130560 0 71627 99.988 2679 11 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://134.75.124.180:3128 0
[2025-06-04 20:20:38] CVMFS is ok
[2025-06-04 20:20:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:20:38] Checking for apptainer binary...
[2025-06-04 20:20:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 20:20:38] Running /usr/bin/apptainer --version
[2025-06-04 20:20:39] apptainer version 1.3.5-1.el9
[2025-06-04 20:20:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:20:39] testio004
[2025-06-04 20:20:39] apptainer works
[2025-06-04 20:20:39] Set ATHENA_PROC_NUMBER=3
[2025-06-04 20:20:39] Set ATHENA_CORE_NUMBER=3
[2025-06-04 20:20:39] Starting ATLAS job with PandaID=6677579479
[2025-06-04 20:20:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 22:06:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 22:06:21] 2025-06-04 13:06:01,462 | INFO     | mean y: 2296883.216494845
[2025-06-04 22:06:21] 2025-06-04 13:06:01,462 | INFO     | -- intersect: -90552750759.79066
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | sufficient remaining disk space (323423830016 B)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | intersect: -90552750759.79066
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | chi2: 0.6871963081048228
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | current chi2=0.6871963081048228 (change=72.32975971550104 %)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,463 | INFO     | sum of deviations: 1995827615.5000002
[2025-06-04 22:06:21] 2025-06-04 13:06:01,464 | INFO     | mean x: 1749039454.5
[2025-06-04 22:06:21] 2025-06-04 13:06:01,464 | INFO     | mean y: 2343352.9891304346
[2025-06-04 22:06:21] 2025-06-04 13:06:01,464 | INFO     | -- intersect: -14456449695.427696
[2025-06-04 22:06:21] 2025-06-04 13:06:01,464 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6677579479: 2518585 B (within 2537553920 B limit)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,465 | INFO     | intersect: -14456449695.427696
[2025-06-04 22:06:21] 2025-06-04 13:06:01,465 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6677579479/HITS.45006595._029812.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,465 | INFO     | chi2: 0.02096281220340089
[2025-06-04 22:06:21] 2025-06-04 13:06:01,465 | INFO     | total size of present files: 0 B (workdir size: 2518585 B)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | current chi2=0.02096281220340089 (change=96.94951617810447 %)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6677579479/HITS.45006595._029812.pool.root.1 since it does not exist
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | sum of square deviations: 204163828.0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | sum of deviations: 1663069169.0000002
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | mean x: 1749039607.0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | mean y: 2344717.1264367816
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | -- intersect: -14244908943.113405
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | intersect: -14244908943.113405
[2025-06-04 22:06:21] 2025-06-04 13:06:01,466 | INFO     | chi2: 0.0005557439240888554
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | current chi2=0.0005557439240888554 (change=97.34890567784271 %)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | sum of deviations: 1224330481.5000005
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | mean x: 1749039759.5
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | mean y: 2346722.451219512
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | -- intersect: -12524534411.248468
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | intersect: -12524534411.248468
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | chi2: 0.00034846777134156797
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | current chi2=0.00034846777134156797 (change=37.297061427548236 %)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,467 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | sum of deviations: 960467326.0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | mean x: 1749039912.0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | mean y: 2348089.4025974027
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | -- intersect: -11866401609.150702
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | intersect: -11866401609.150702
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | chi2: 0.00032582247071129543
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | current chi2=0.00032582247071129543 (change=6.498535156663202 %)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | left removable region: 50
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | sum of deviations: 187078185.49999997
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | mean x: 1749040491.5
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | mean y: 2353425.6739130435
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | -- intersect: -10843816031.021168
[2025-06-04 22:06:21] 2025-06-04 13:06:01,468 | INFO     | intersect: -10843816031.021168
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | chi2: 0.00013773742731675362
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | -- intersect: -10843816031.021168
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | current memory leak: 6.20 B/s (using 46 data points, chi2=0.00)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | ..............................
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | . Timing measurements:
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | . get job = 0 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,469 | INFO     | . initial setup = 5 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,470 | INFO     | . payload setup = 3 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,470 | INFO     | . stage-in = 0 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,470 | INFO     | . payload execution = 6214 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,470 | INFO     | . stage-out = 0 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,470 | INFO     | . log creation = 0 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,470 | INFO     | ..............................
[2025-06-04 22:06:21] 2025-06-04 13:06:01,510 | INFO     | 
[2025-06-04 22:06:21] 2025-06-04 13:06:01,510 | INFO     | job summary report
[2025-06-04 22:06:21] 2025-06-04 13:06:01,510 | INFO     | --------------------------------------------------
[2025-06-04 22:06:21] 2025-06-04 13:06:01,510 | INFO     | PanDA job id: 6677579479
[2025-06-04 22:06:21] 2025-06-04 13:06:01,510 | INFO     | task id: 45006595
[2025-06-04 22:06:21] 2025-06-04 13:06:01,510 | INFO     | errors: (none)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | pilot state: finished 
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | transexitcode: 0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | exeerrorcode: 0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | exeerrordiag: 
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | exitcode: 0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | exitmsg: OK
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | cpuconsumptiontime: 16497 s
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | nevents: 400
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | neventsw: 0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | pid: 755029
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | pgrp: 755029
[2025-06-04 22:06:21] 2025-06-04 13:06:01,511 | INFO     | corecount: 3
[2025-06-04 22:06:21] 2025-06-04 13:06:01,512 | INFO     | event service: False
[2025-06-04 22:06:21] 2025-06-04 13:06:01,512 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 6221: 2432139, 6222: 2441080, 6223: 2441136, 6299: 2441462}
[2025-06-04 22:06:21] 2025-06-04 13:06:01,512 | INFO     | --------------------------------------------------
[2025-06-04 22:06:21] 2025-06-04 13:06:01,512 | INFO     | 
[2025-06-04 22:06:21] 2025-06-04 13:06:01,512 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 22:06:21] 2025-06-04 13:06:01,523 | INFO     | job 6677579479 has completed (purged errors)
[2025-06-04 22:06:21] 2025-06-04 13:06:01,523 | INFO     | overall cleanup function is called
[2025-06-04 22:06:21] 2025-06-04 13:06:01,546 | INFO     | number of running child processes to parent process 755029: 1
[2025-06-04 22:06:21] 2025-06-04 13:06:01,546 | INFO     | maximum number of monitored processes: 6
[2025-06-04 22:06:21] 2025-06-04 13:06:01,546 | INFO     | aborting job monitoring since job object (job id=6677579479) has expired
[2025-06-04 22:06:21] 2025-06-04 13:06:02,529 | INFO     | --- collectZombieJob: --- 10, [755029]
[2025-06-04 22:06:21] 2025-06-04 13:06:02,529 | INFO     | zombie collector waiting for pid 755029
[2025-06-04 22:06:21] 2025-06-04 13:06:02,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 22:06:21] 2025-06-04 13:06:02,529 | INFO     | collected zombie processes
[2025-06-04 22:06:21] 2025-06-04 13:06:02,529 | INFO     | will attempt to kill all subprocesses of pid=755029
[2025-06-04 22:06:21] 2025-06-04 13:06:02,558 | INFO     | process IDs to be killed: [755029] (in reverse order)
[2025-06-04 22:06:21] 2025-06-04 13:06:02,576 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 22:06:21] 2025-06-04 13:06:02,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 22:06:21] 2025-06-04 13:06:02,577 | INFO     | did not find any defunct processes belonging to 755029
[2025-06-04 22:06:21] 2025-06-04 13:06:02,578 | INFO     | did not find any defunct processes belonging to 755029
[2025-06-04 22:06:21] 2025-06-04 13:06:02,578 | INFO     | ready for new job
[2025-06-04 22:06:21] 2025-06-04 13:06:02,578 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 22:06:21] 2025-06-04 13:06:02,579 | INFO     | **************************************
[2025-06-04 22:06:21] 2025-06-04 13:06:02,579 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 22:06:21] 2025-06-04 13:06:02,579 | INFO     | **************************************
[2025-06-04 22:06:21] 2025-06-04 13:06:02,579 | INFO     | 
[2025-06-04 22:06:21] 2025-06-04 13:06:02,579 | INFO     | architecture information:
[2025-06-04 22:06:21] 2025-06-04 13:06:02,580 | INFO     | executing command: cat /etc/os-release
[2025-06-04 22:06:21] 2025-06-04 13:06:02,588 | INFO     | cat /etc/os-release:
[2025-06-04 22:06:21] NAME="CentOS Linux"
[2025-06-04 22:06:21] VERSION="7 (Core)"
[2025-06-04 22:06:21] ID="centos"
[2025-06-04 22:06:21] ID_LIKE="rhel fedora"
[2025-06-04 22:06:21] VERSION_ID="7"
[2025-06-04 22:06:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 22:06:21] ANSI_COLOR="0;31"
[2025-06-04 22:06:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 22:06:21] HOME_URL="https://www.centos.org/"
[2025-06-04 22:06:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 22:06:21] 
[2025-06-04 22:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 22:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 22:06:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 22:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 22:06:21] 
[2025-06-04 22:06:21] 2025-06-04 13:06:02,588 | INFO     | **************************************
[2025-06-04 22:06:21] 2025-06-04 13:06:03,091 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 22:06:21] 2025-06-04 13:06:03,099 | INFO     | sufficient remaining disk space (323426975744 B)
[2025-06-04 22:06:21] 2025-06-04 13:06:03,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 22:06:21] 2025-06-04 13:06:03,099 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 22:06:21] 2025-06-04 13:06:03,099 | INFO     | update_server=False
[2025-06-04 22:06:21] 2025-06-04 13:06:03,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 22:06:21] 2025-06-04 13:06:03,099 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | INFO     | aborting loop
[2025-06-04 22:06:21] 2025-06-04 13:06:03,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 22:06:21] 2025-06-04 13:06:03,450 | INFO     | all job control threads have been joined
[2025-06-04 22:06:21] 2025-06-04 13:06:03,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 22:06:21] 2025-06-04 13:06:03,843 | INFO     | all data control threads have been joined
[2025-06-04 22:06:21] 2025-06-04 13:06:04,104 | INFO     | [job] retrieve thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,105 | INFO     | [job] queue monitor thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,106 | INFO     | [job] job monitor thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,159 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,292 | INFO     | [data] copytool_in thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,360 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,455 | INFO     | [job] control thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,509 | INFO     | [payload] failed_post thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:04,589 | INFO     | all payload control threads have been joined
[2025-06-04 22:06:21] 2025-06-04 13:06:04,848 | INFO     | [data] control thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:05,038 | INFO     | [payload] validate_post thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:05,106 | INFO     | [data] copytool_out thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:05,573 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:05,579 | INFO     | [job] validate thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:05,595 | INFO     | [payload] control thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:07,728 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:13,783 | INFO     | job.realtimelogging is not enabled
[2025-06-04 22:06:21] 2025-06-04 13:06:14,788 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 22:06:21] 2025-06-04 13:06:16,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223429125952)>', '<ExcThread(monitor, started 140222553646848)>']
[2025-06-04 22:06:21] 2025-06-04 13:06:17,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 22:06:21] 2025-06-04 13:06:17,161 | INFO     | [monitor] control thread has ended
[2025-06-04 22:06:21] 2025-06-04 13:06:21,331 | INFO     | all workflow threads have been joined
[2025-06-04 22:06:21] 2025-06-04 13:06:21,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 22:06:21] 2025-06-04 13:06:21,331 | INFO     | traces error code: 0
[2025-06-04 22:06:21] 2025-06-04 13:06:21,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 22:06:21] 2025-06-04 13:06:21,389 [wrapper] ==== pilot stdout END ====
[2025-06-04 22:06:21] 2025-06-04 13:06:21,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 22:06:21] 2025-06-04 13:06:21,392 [wrapper] pilotpid: 748686
[2025-06-04 22:06:21] 2025-06-04 13:06:21,394 [wrapper] Pilot exit status: 0
[2025-06-04 22:06:21] 2025-06-04 13:06:21,399 [wrapper] pandaids: 6677579479
[2025-06-04 22:06:21] 2025-06-04 13:06:21,411 [wrapper] cleanup supervisor_pilot  770552 748687
[2025-06-04 22:06:21] 2025-06-04 13:06:21,412 [wrapper] Test setup, not cleaning
[2025-06-04 22:06:21] 2025-06-04 13:06:21,414 [wrapper] apfmon messages muted
[2025-06-04 22:06:21] 2025-06-04 13:06:21,415 [wrapper] ==== wrapper stdout END ====
[2025-06-04 22:06:21] 2025-06-04 13:06:21,417 [wrapper] ==== wrapper stderr END ====
[2025-06-04 22:06:21]  *** Error codes and diagnostics ***
[2025-06-04 22:06:21]     "exeErrorCode": 0,
[2025-06-04 22:06:21]     "exeErrorDiag": "",
[2025-06-04 22:06:21]     "pilotErrorCode": 0,
[2025-06-04 22:06:21]     "pilotErrorDiag": "",
[2025-06-04 22:06:21]  *** Listing of results directory ***
[2025-06-04 22:06:21] total 389568
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 19:57 pilot3.tar.gz
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 20:06 queuedata.json
[2025-06-04 22:06:21] -rwx------. 1 boinc boinc     37140 Jun  3 20:06 runpilot2-wrapper.sh
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 22:06:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:20 run_atlas
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:20 job.xml
[2025-06-04 22:06:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:20 start_atlas.sh
[2025-06-04 22:06:21] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:20 shared
[2025-06-04 22:06:21] -rw-r--r--. 2 boinc boinc    508876 Jun  4 20:20 input.tar.gz
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc      6507 Jun  4 20:20 init_data.xml
[2025-06-04 22:06:21] -rw-r--r--. 2 boinc boinc 216253522 Jun  4 20:20 EVNT.45006593._001193.pool.root.1
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:20 boinc_lockfile
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc      2525 Jun  4 20:20 pandaJob.out
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc    986812 Jun  4 20:20 agis_schedconf.cvmfs.json
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc   1603667 Jun  4 20:20 agis_ddmendpoints.agis.ALL.json
[2025-06-04 22:06:21] drwx------. 4 boinc boinc      4096 Jun  4 20:20 pilot3
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc 177204142 Jun  4 22:04 HITS.45006595._029812.pool.root.1
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc      1017 Jun  4 22:04 memory_monitor_summary.json
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc    237965 Jun  4 22:04 log.45006595._029812.job.log.tgz.1
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc       529 Jun  4 22:04 boinc_task_state.xml
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc        95 Jun  4 22:05 pilot_heartbeat.json
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc      7664 Jun  4 22:06 heartbeat.json
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc      8192 Jun  4 22:06 boinc_mmap_file
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc        27 Jun  4 22:06 wrapper_checkpoint.txt
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc      4549 Jun  4 22:06 pilotlog.txt
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc    581511 Jun  4 22:06 log.45006595._029812.job.log.1
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc       357 Jun  4 22:06 output.list
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:06 runtime_log
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc    839680 Jun  4 22:06 result.tar.gz
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc      8617 Jun  4 22:06 runtime_log.err
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc       643 Jun  4 22:06 dw9KDm8deg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFdjKDmrucg8n.diag
[2025-06-04 22:06:21] -rw-r--r--. 1 boinc boinc     20950 Jun  4 22:06 stderr.txt
[2025-06-04 22:06:21] HITS file was successfully produced:
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc 177204142 Jun  4 22:04 shared/HITS.pool.root.1
[2025-06-04 22:06:21]  *** Contents of shared directory: ***
[2025-06-04 22:06:21] total 385576
[2025-06-04 22:06:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:20 start_atlas.sh
[2025-06-04 22:06:21] -rw-r--r--. 2 boinc boinc    508876 Jun  4 20:20 input.tar.gz
[2025-06-04 22:06:21] -rw-r--r--. 2 boinc boinc 216253522 Jun  4 20:20 ATLAS.root_0
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc 177204142 Jun  4 22:04 HITS.pool.root.1
[2025-06-04 22:06:21] -rw-------. 1 boinc boinc    839680 Jun  4 22:06 result.tar.gz
22:06:22 (745099): run_atlas exited; CPU time 16520.432586
22:06:22 (745099): called boinc_finish(0)

</stderr_txt>
]]>

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