Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:11 (3225371): wrapper (7.7.26015): starting
05:01:11 (3225371): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 05:01:11] Arguments: --nthreads 4
[2025-06-05 05:01:11] Threads: 4
[2025-06-05 05:01:11] Checking for CVMFS
[2025-06-05 05:01:11] No cvmfs_config command found, will try listing directly
[2025-06-05 05:01:11] CVMFS is ok
[2025-06-05 05:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:01:11] Further information can be found at the LHC@home message board.
[2025-06-05 05:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:01:11] Checking for apptainer binary...
[2025-06-05 05:01:11] which: no apptainer in ((null))
[2025-06-05 05:01:11] apptainer is not installed, using version from CVMFS
[2025-06-05 05:01:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:01:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2025-06-05 05:01:11] apptainer works
[2025-06-05 05:01:11] Set ATHENA_PROC_NUMBER=4
[2025-06-05 05:01:11] Set ATHENA_CORE_NUMBER=4
[2025-06-05 05:01:11] Starting ATLAS job with PandaID=6677636294
[2025-06-05 05:01:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:18:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:18:54] 2025-06-05 06:08:50,933 | INFO     | 11253s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 08:18:54] 2025-06-05 06:08:51,016 | INFO     | monitor loop #828: job 0:6677636294 is in state 'finished'
[2025-06-05 08:18:54] 2025-06-05 06:08:51,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,100 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:18:54] 2025-06-05 06:08:51,100 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6677636294/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,101 | INFO     | extracted standard info from prmon json
[2025-06-05 08:18:54] 2025-06-05 06:08:51,101 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:18:54] 2025-06-05 06:08:51,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:18:54] 2025-06-05 06:08:51,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:18:54] 2025-06-05 06:08:51,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:18:54] 2025-06-05 06:08:51,106 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:18:54] 2025-06-05 06:08:51,106 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,107 | INFO     | sum of deviations: 20707060884.50001
[2025-06-05 08:18:54] 2025-06-05 06:08:51,108 | INFO     | mean x: 1749098086.5
[2025-06-05 08:18:54] 2025-06-05 06:08:51,108 | INFO     | mean y: 2322113.3315217393
[2025-06-05 08:18:54] 2025-06-05 06:08:51,108 | INFO     | -- intersect: -18748208407.070915
[2025-06-05 08:18:54] 2025-06-05 06:08:51,108 | INFO     | intersect: -18748208407.070915
[2025-06-05 08:18:54] 2025-06-05 06:08:51,108 | INFO     | chi2: 1.6121809531945714
[2025-06-05 08:18:54] 2025-06-05 06:08:51,109 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,110 | INFO     | sum of deviations: 19853044201.0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,110 | INFO     | mean x: 1749097934.0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,110 | INFO     | mean y: 2321264.3016759777
[2025-06-05 08:18:54] 2025-06-05 06:08:51,110 | INFO     | -- intersect: -19523858081.64394
[2025-06-05 08:18:54] 2025-06-05 06:08:51,110 | INFO     | intersect: -19523858081.64394
[2025-06-05 08:18:54] 2025-06-05 06:08:51,111 | INFO     | chi2: 1.613513162705084
[2025-06-05 08:18:54] 2025-06-05 06:08:51,111 | INFO     | current chi2=1.613513162705084 (change=-0.08263399389955596 %)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,111 | INFO     | right removable region: 178
[2025-06-05 08:18:54] 2025-06-05 06:08:51,111 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,112 | INFO     | sum of deviations: -7444520886.000016
[2025-06-05 08:18:54] 2025-06-05 06:08:51,113 | INFO     | mean x: 1749098239.0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,113 | INFO     | mean y: 2349812.4972067038
[2025-06-05 08:18:54] 2025-06-05 06:08:51,113 | INFO     | -- intersect: 7324303757.732529
[2025-06-05 08:18:54] 2025-06-05 06:08:51,113 | INFO     | intersect: 7324303757.732529
[2025-06-05 08:18:54] 2025-06-05 06:08:51,113 | INFO     | chi2: 0.0575308361032304
[2025-06-05 08:18:54] 2025-06-05 06:08:51,113 | INFO     | current chi2=0.0575308361032304 (change=96.43149015070351 %)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,114 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 08:18:54] 2025-06-05 06:08:51,115 | INFO     | sum of deviations: -4436289324.5
[2025-06-05 08:18:54] 2025-06-05 06:08:51,115 | INFO     | mean x: 1749098391.5
[2025-06-05 08:18:54] 2025-06-05 06:08:51,115 | INFO     | mean y: 2346623.8908045976
[2025-06-05 08:18:54] 2025-06-05 06:08:51,115 | INFO     | -- intersect: 4752660192.739065
[2025-06-05 08:18:54] 2025-06-05 06:08:51,115 | INFO     | intersect: 4752660192.739065
[2025-06-05 08:18:54] 2025-06-05 06:08:51,116 | INFO     | chi2: 0.046975777140218444
[2025-06-05 08:18:54] 2025-06-05 06:08:51,116 | INFO     | current chi2=0.046975777140218444 (change=18.34678526846454 %)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,116 | INFO     | left removable region: 20
[2025-06-05 08:18:54] 2025-06-05 06:08:51,116 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 08:18:54] 2025-06-05 06:08:51,117 | INFO     | sum of deviations: 3289487555.5000005
[2025-06-05 08:18:54] 2025-06-05 06:08:51,117 | INFO     | mean x: 1749098513.5
[2025-06-05 08:18:54] 2025-06-05 06:08:51,118 | INFO     | mean y: 2336774.1962025315
[2025-06-05 08:18:54] 2025-06-05 06:08:51,118 | INFO     | -- intersect: -4702128106.049667
[2025-06-05 08:18:54] 2025-06-05 06:08:51,118 | INFO     | intersect: -4702128106.049667
[2025-06-05 08:18:54] 2025-06-05 06:08:51,118 | INFO     | chi2: 0.0009875644078914008
[2025-06-05 08:18:54] 2025-06-05 06:08:51,119 | INFO     | -- intersect: -4702128106.049667
[2025-06-05 08:18:54] 2025-06-05 06:08:51,119 | INFO     | current memory leak: 2.69 B/s (using 158 data points, chi2=0.00)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,119 | INFO     | ..............................
[2025-06-05 08:18:54] 2025-06-05 06:08:51,119 | INFO     | . Timing measurements:
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . get job = 0 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . initial setup = 1 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . payload setup = 6 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . stage-in = 0 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . payload execution = 11222 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . stage-out = 1 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | . log creation = 0 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,120 | INFO     | ..............................
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | 
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | job summary report
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | --------------------------------------------------
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | PanDA job id: 6677636294
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | task id: 45006595
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | errors: (none)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | pilot state: finished 
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | transexitcode: 0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | exeerrorcode: 0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | exeerrordiag: 
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | exitcode: 0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | exitmsg: OK
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | cpuconsumptiontime: 43142 s
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | nevents: 400
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | neventsw: 0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,231 | INFO     | pid: 3245745
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | pgrp: 3245745
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | corecount: 4
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | event service: False
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | sizes: {0: 2396514, 1: 2397381, 5: 2397587, 12: 2397643, 11232: 2426593, 11233: 2435740, 11237: 2435854}
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | --------------------------------------------------
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | 
[2025-06-05 08:18:54] 2025-06-05 06:08:51,232 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-06-05 08:18:54] 2025-06-05 06:08:51,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,251 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,251 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:18:54] 2025-06-05 06:08:51,253 | INFO     | job 6677636294 has completed (purged errors)
[2025-06-05 08:18:54] 2025-06-05 06:08:51,254 | INFO     | overall cleanup function is called
[2025-06-05 08:18:54] 2025-06-05 06:08:52,224 | INFO     | PID=3232269 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:18:54] 2025-06-05 06:08:52,225 | INFO     | .. there are 3 such processes running
[2025-06-05 08:18:54] 2025-06-05 06:08:52,261 | INFO     | --- collectZombieJob: --- 10, [3245745]
[2025-06-05 08:18:54] 2025-06-05 06:08:52,261 | INFO     | zombie collector waiting for pid 3245745
[2025-06-05 08:18:54] 2025-06-05 06:08:52,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:18:54] 2025-06-05 06:08:52,261 | INFO     | collected zombie processes
[2025-06-05 08:18:54] 2025-06-05 06:08:52,262 | INFO     | will attempt to kill all subprocesses of pid=3245745
[2025-06-05 08:18:54] 2025-06-05 06:08:52,488 | INFO     | process IDs to be killed: [3245745] (in reverse order)
[2025-06-05 08:18:54] 2025-06-05 06:08:52,552 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:18:54] 2025-06-05 06:08:52,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:18:54] 2025-06-05 06:08:52,559 | INFO     | did not find any defunct processes belonging to 3245745
[2025-06-05 08:18:54] 2025-06-05 06:08:52,566 | INFO     | did not find any defunct processes belonging to 3245745
[2025-06-05 08:18:54] 2025-06-05 06:08:52,566 | INFO     | ready for new job
[2025-06-05 08:18:54] 2025-06-05 06:08:52,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:18:54] 2025-06-05 06:08:52,568 | INFO     | **************************************
[2025-06-05 08:18:54] 2025-06-05 06:08:52,568 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:18:54] 2025-06-05 06:08:52,568 | INFO     | **************************************
[2025-06-05 08:18:54] 2025-06-05 06:08:52,568 | INFO     | 
[2025-06-05 08:18:54] 2025-06-05 06:08:52,570 | INFO     | architecture information:
[2025-06-05 08:18:54] 2025-06-05 06:08:52,570 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:18:54] 2025-06-05 06:08:52,584 | INFO     | cat /etc/os-release:
[2025-06-05 08:18:54] NAME="CentOS Linux"
[2025-06-05 08:18:54] VERSION="7 (Core)"
[2025-06-05 08:18:54] ID="centos"
[2025-06-05 08:18:54] ID_LIKE="rhel fedora"
[2025-06-05 08:18:54] VERSION_ID="7"
[2025-06-05 08:18:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:18:54] ANSI_COLOR="0;31"
[2025-06-05 08:18:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:18:54] HOME_URL="https://www.centos.org/"
[2025-06-05 08:18:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:18:54] 
[2025-06-05 08:18:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:18:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:18:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:18:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:18:54] 
[2025-06-05 08:18:54] 2025-06-05 06:08:52,584 | INFO     | **************************************
[2025-06-05 08:18:54] 2025-06-05 06:08:53,085 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-06-05 08:18:54] 2025-06-05 06:08:53,101 | INFO     | sufficient remaining disk space (3465524805632 B)
[2025-06-05 08:18:54] 2025-06-05 06:08:53,101 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:18:54] 2025-06-05 06:08:53,101 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:18:54] 2025-06-05 06:08:53,102 | INFO     | update_server=False
[2025-06-05 08:18:54] 2025-06-05 06:08:53,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:18:54] 2025-06-05 06:08:53,102 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:18:54] 2025-06-05 06:08:53,102 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:18:54] 2025-06-05 06:08:53,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:18:54] 2025-06-05 06:08:53,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:18:54] 2025-06-05 06:08:53,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:18:54] 2025-06-05 06:08:53,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:18:54] 2025-06-05 06:08:53,333 | INFO     | all payload control threads have been joined
[2025-06-05 08:18:54] 2025-06-05 06:08:53,519 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 08:18:54] 2025-06-05 06:08:53,519 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 08:18:54] 2025-06-05 06:08:53,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:18:54] 2025-06-05 06:08:53,520 | INFO     | will abort loop
[2025-06-05 08:18:54] 2025-06-05 06:08:53,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:18:54] 2025-06-05 06:08:53,691 | INFO     | all data control threads have been joined
[2025-06-05 08:18:54] 2025-06-05 06:08:54,104 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,108 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,300 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,305 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,338 | INFO     | [payload] control thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,525 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,559 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,696 | INFO     | [data] control thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,761 | INFO     | all job control threads have been joined
[2025-06-05 08:18:54] 2025-06-05 06:08:54,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:54,767 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:55,108 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:55,271 | INFO     | [job] validate thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:55,272 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:55,364 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:55,766 | INFO     | [job] control thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:57,569 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:18:54] 2025-06-05 06:08:58,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22713838860096)>', '<ExcThread(monitor, started 22713263453952)>']
[2025-06-05 08:18:54] 2025-06-05 06:08:58,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:18:54] 2025-06-05 06:08:58,116 | INFO     | [monitor] control thread has ended
[2025-06-05 08:18:54] 2025-06-05 06:09:03,131 | INFO     | all workflow threads have been joined
[2025-06-05 08:18:54] 2025-06-05 06:09:03,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:18:54] 2025-06-05 06:09:03,132 | INFO     | traces error code: 0
[2025-06-05 08:18:54] 2025-06-05 06:09:03,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:18:54] 2025-06-05 06:09:03,248 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:18:54] 2025-06-05 06:09:03,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:18:54] 2025-06-05 06:09:03,253 [wrapper] pilotpid: 3232269
[2025-06-05 08:18:54] 2025-06-05 06:09:03,256 [wrapper] Pilot exit status: 0
[2025-06-05 08:18:54] 2025-06-05 06:09:03,264 [wrapper] pandaids: 6677636294
[2025-06-05 08:18:54] 2025-06-05 06:09:03,307 [wrapper] cleanup supervisor_pilot 3425966 3232270
[2025-06-05 08:18:54] 2025-06-05 06:09:03,309 [wrapper] Test setup, not cleaning
[2025-06-05 08:18:54] 2025-06-05 06:09:03,312 [wrapper] apfmon messages muted
[2025-06-05 08:18:54] 2025-06-05 06:09:03,314 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:18:54] 2025-06-05 06:09:03,316 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:18:54]  *** Error codes and diagnostics ***
[2025-06-05 08:18:54]     "exeErrorCode": 0,
[2025-06-05 08:18:54]     "exeErrorDiag": "",
[2025-06-05 08:18:54]     "pilotErrorCode": 0,
[2025-06-05 08:18:54]     "pilotErrorDiag": "",
[2025-06-05 08:18:54]  *** Listing of results directory ***
[2025-06-05 08:18:54] total 390156
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc    495897 Jun  3 15:40 pilot3.tar.gz
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc      5111 Jun  3 15:42 queuedata.json
[2025-06-05 08:18:54] -rwx------ 1 boinc boinc     37140 Jun  3 15:43 runpilot2-wrapper.sh
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc       100 Jun  5 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:18:54] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:01 run_atlas
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc       105 Jun  5 05:01 job.xml
[2025-06-05 08:18:54] -rw-r--r-- 2 boinc boinc 215103882 Jun  5 05:01 EVNT.45006593._001383.pool.root.1
[2025-06-05 08:18:54] -rw-r--r-- 2 boinc boinc    508887 Jun  5 05:01 input.tar.gz
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc      6418 Jun  5 05:01 init_data.xml
[2025-06-05 08:18:54] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:01 start_atlas.sh
[2025-06-05 08:18:54] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:01 shared
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc         0 Jun  5 05:01 boinc_lockfile
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc      2525 Jun  5 05:01 pandaJob.out
[2025-06-05 08:18:54] -rw------- 1 boinc boinc    987109 Jun  5 05:01 agis_schedconf.cvmfs.json
[2025-06-05 08:18:54] drwx------ 4 boinc boinc      4096 Jun  5 05:01 pilot3
[2025-06-05 08:18:54] -rw------- 1 boinc boinc 177832565 Jun  5 08:08 HITS.45006595._034393.pool.root.1
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc       528 Jun  5 08:08 boinc_task_state.xml
[2025-06-05 08:18:54] -rw------- 1 boinc boinc        95 Jun  5 08:08 pilot_heartbeat.json
[2025-06-05 08:18:54] -rw------- 1 boinc boinc      1034 Jun  5 08:08 memory_monitor_summary.json
[2025-06-05 08:18:54] -rw------- 1 boinc boinc   1598969 Jun  5 08:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:18:54] -rw------- 1 boinc boinc    311043 Jun  5 08:08 log.45006595._034393.job.log.tgz.1
[2025-06-05 08:18:54] -rw------- 1 boinc boinc      7721 Jun  5 08:08 heartbeat.json
[2025-06-05 08:18:54] -rw------- 1 boinc boinc      4673 Jun  5 08:09 pilotlog.txt
[2025-06-05 08:18:54] -rw------- 1 boinc boinc   1067490 Jun  5 08:09 log.45006595._034393.job.log.1
[2025-06-05 08:18:54] -rw------- 1 boinc boinc       357 Jun  5 08:09 output.list
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc       620 Jun  5 08:09 runtime_log
[2025-06-05 08:18:54] -rw------- 1 boinc boinc   1392640 Jun  5 08:09 result.tar.gz
[2025-06-05 08:18:54] -rw------- 1 boinc boinc       664 Jun  5 08:09 vNVNDma6gg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZoYKDmJE4zon.diag
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc      9021 Jun  5 08:09 runtime_log.err
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc        26 Jun  5 08:18 wrapper_checkpoint.txt
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc      8192 Jun  5 08:18 boinc_mmap_file
[2025-06-05 08:18:54] -rw-r--r-- 1 boinc boinc     20942 Jun  5 08:18 stderr.txt
[2025-06-05 08:18:54] HITS file was successfully produced:
[2025-06-05 08:18:54] -rw------- 1 boinc boinc 177832565 Jun  5 08:08 shared/HITS.pool.root.1
[2025-06-05 08:18:54]  *** Contents of shared directory: ***
[2025-06-05 08:18:54] total 385616
[2025-06-05 08:18:54] -rw-r--r-- 2 boinc boinc 215103882 Jun  5 05:01 ATLAS.root_0
[2025-06-05 08:18:54] -rw-r--r-- 2 boinc boinc    508887 Jun  5 05:01 input.tar.gz
[2025-06-05 08:18:54] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:01 start_atlas.sh
[2025-06-05 08:18:54] -rw------- 1 boinc boinc 177832565 Jun  5 08:08 HITS.pool.root.1
[2025-06-05 08:18:54] -rw------- 1 boinc boinc   1392640 Jun  5 08:09 result.tar.gz
08:18:56 (3225371): run_atlas exited; CPU time 43448.698408
08:18:56 (3225371): called boinc_finish(0)

</stderr_txt>
]]>

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