Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:30:59 (25464): wrapper (7.7.26015): starting
01:30:59 (25464): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:30:59] Arguments: --nthreads 8
[2025-06-04 01:30:59] Threads: 8
[2025-06-04 01:30:59] Checking for CVMFS
[2025-06-04 01:30:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:31:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:31:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:31:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:31:01] 2.11.2.0 23942 32427 101416 146761 3 69 23508989 25165824 3906 130560 0 17790363 99.852 16970318 1848 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:31:01] CVMFS is ok
[2025-06-04 01:31:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:31:01] Checking for apptainer binary...
[2025-06-04 01:31:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:31:01] Running /usr/bin/apptainer --version
[2025-06-04 01:31:01] apptainer version 1.3.2-1.el7
[2025-06-04 01:31:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:41:48] cg-vwn380.simple-grid.lan
[2025-06-04 01:41:48] apptainer works
[2025-06-04 01:41:48] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:41:48] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:41:48] Starting ATLAS job with PandaID=6677636282
[2025-06-04 01:41:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:53:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:53:01] 2025-06-04 03:40:51,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:53:01] 2025-06-04 03:40:51,526 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:53:01] 2025-06-04 03:40:51,527 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:53:01] 2025-06-04 03:40:51,532 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:53:01] 2025-06-04 03:40:51,533 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,535 | INFO     | sum of deviations: 59823142433.00003
[2025-06-04 06:53:01] 2025-06-04 03:40:51,535 | INFO     | mean x: 1749001528.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,535 | INFO     | mean y: 2435365.2197309416
[2025-06-04 06:53:01] 2025-06-04 03:40:51,535 | INFO     | -- intersect: -30425685405.069477
[2025-06-04 06:53:01] 2025-06-04 03:40:51,535 | INFO     | intersect: -30425685405.069477
[2025-06-04 06:53:01] 2025-06-04 03:40:51,536 | INFO     | chi2: 6.479028680621548
[2025-06-04 06:53:01] 2025-06-04 03:40:51,536 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,538 | INFO     | sum of deviations: 73120008473.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,538 | INFO     | mean x: 1749001375.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,538 | INFO     | mean y: 2444151.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,539 | INFO     | -- intersect: -39807137875.38466
[2025-06-04 06:53:01] 2025-06-04 03:40:51,539 | INFO     | intersect: -39807137875.38466
[2025-06-04 06:53:01] 2025-06-04 03:40:51,539 | INFO     | chi2: 5.767424338286978
[2025-06-04 06:53:01] 2025-06-04 03:40:51,539 | INFO     | current chi2=5.767424338286978 (change=10.983194818429237 %)
[2025-06-04 06:53:01] 2025-06-04 03:40:51,539 | INFO     | right removable region: 217
[2025-06-04 06:53:01] 2025-06-04 03:40:51,540 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,541 | INFO     | sum of deviations: -16884118416.499998
[2025-06-04 06:53:01] 2025-06-04 03:40:51,542 | INFO     | mean x: 1749001680.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,542 | INFO     | mean y: 2487042.160550459
[2025-06-04 06:53:01] 2025-06-04 03:40:51,542 | INFO     | -- intersect: 9194906850.342964
[2025-06-04 06:53:01] 2025-06-04 03:40:51,542 | INFO     | intersect: 9194906850.342964
[2025-06-04 06:53:01] 2025-06-04 03:40:51,542 | INFO     | chi2: 1.7181089810661416
[2025-06-04 06:53:01] 2025-06-04 03:40:51,542 | INFO     | current chi2=1.7181089810661416 (change=73.48199759934819 %)
[2025-06-04 06:53:01] 2025-06-04 03:40:51,543 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,545 | INFO     | sum of deviations: -42434081175.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,545 | INFO     | mean x: 1749001833.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,545 | INFO     | mean y: 2504921.370892019
[2025-06-04 06:53:01] 2025-06-04 03:40:51,545 | INFO     | -- intersect: 24770873727.07625
[2025-06-04 06:53:01] 2025-06-04 03:40:51,545 | INFO     | intersect: 24770873727.07625
[2025-06-04 06:53:01] 2025-06-04 03:40:51,546 | INFO     | chi2: 0.950819584447546
[2025-06-04 06:53:01] 2025-06-04 03:40:51,546 | INFO     | current chi2=0.950819584447546 (change=44.658948010531205 %)
[2025-06-04 06:53:01] 2025-06-04 03:40:51,546 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,548 | INFO     | sum of deviations: -39957436736.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,548 | INFO     | mean x: 1749001985.5
[2025-06-04 06:53:01] 2025-06-04 03:40:51,548 | INFO     | mean y: 2503049.091346154
[2025-06-04 06:53:01] 2025-06-04 03:40:51,548 | INFO     | -- intersect: 25047993031.56825
[2025-06-04 06:53:01] 2025-06-04 03:40:51,548 | INFO     | intersect: 25047993031.56825
[2025-06-04 06:53:01] 2025-06-04 03:40:51,549 | INFO     | chi2: 0.9372463770961104
[2025-06-04 06:53:01] 2025-06-04 03:40:51,549 | INFO     | current chi2=0.9372463770961104 (change=1.4275271117098483 %)
[2025-06-04 06:53:01] 2025-06-04 03:40:51,549 | INFO     | left removable region: 30
[2025-06-04 06:53:01] 2025-06-04 03:40:51,549 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,551 | INFO     | sum of deviations: -3602957069.999999
[2025-06-04 06:53:01] 2025-06-04 03:40:51,551 | INFO     | mean x: 1749002260.0
[2025-06-04 06:53:01] 2025-06-04 03:40:51,551 | INFO     | mean y: 2495410.6470588236
[2025-06-04 06:53:01] 2025-06-04 03:40:51,551 | INFO     | -- intersect: 3110335282.256142
[2025-06-04 06:53:01] 2025-06-04 03:40:51,551 | INFO     | intersect: 3110335282.256142
[2025-06-04 06:53:01] 2025-06-04 03:40:51,552 | INFO     | chi2: 0.04681486750137482
[2025-06-04 06:53:01] 2025-06-04 03:40:51,552 | INFO     | -- intersect: 3110335282.256142
[2025-06-04 06:53:01] 2025-06-04 03:40:51,552 | INFO     | current memory leak: -1.78 B/s (using 187 data points, chi2=0.05)
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | ..............................
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | . Timing measurements:
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | . get job = 0 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | . initial setup = 9 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | . payload setup = 154 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | . stage-in = 0 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,553 | INFO     | . payload execution = 13736 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,554 | INFO     | . stage-out = 3 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,554 | INFO     | . log creation = 1 s
[2025-06-04 06:53:01] 2025-06-04 03:40:51,554 | INFO     | ..............................
[2025-06-04 06:53:01] 2025-06-04 03:40:52,131 | INFO     | 
[2025-06-04 06:53:01] 2025-06-04 03:40:52,131 | INFO     | job summary report
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | --------------------------------------------------
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | PanDA job id: 6677636282
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | task id: 45006595
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | errors: (none)
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | pilot state: finished 
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | transexitcode: 0
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | exeerrorcode: 0
[2025-06-04 06:53:01] 2025-06-04 03:40:52,132 | INFO     | exeerrordiag: 
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | exitcode: 0
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | exitmsg: OK
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | cpuconsumptiontime: 49268 s
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | nevents: 400
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | neventsw: 0
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | pid: 11637
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | pgrp: 11637
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | corecount: 8
[2025-06-04 06:53:01] 2025-06-04 03:40:52,133 | INFO     | event service: False
[2025-06-04 06:53:01] 2025-06-04 03:40:52,134 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 23: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 66: 2405506, 76: 2405534, 87: 2405590, 90: 2405824, 98: 2406132, 1
[2025-06-04 06:53:01] 2025-06-04 03:40:52,134 | INFO     | --------------------------------------------------
[2025-06-04 06:53:01] 2025-06-04 03:40:52,134 | INFO     | 
[2025-06-04 06:53:01] 2025-06-04 03:40:52,134 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 06:53:01] 2025-06-04 03:40:52,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,269 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,269 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,269 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,269 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,269 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | job 6677636282 has completed (purged errors)
[2025-06-04 06:53:01] 2025-06-04 03:40:52,271 | INFO     | overall cleanup function is called
[2025-06-04 06:53:01] 2025-06-04 03:40:53,281 | INFO     | --- collectZombieJob: --- 10, [11637]
[2025-06-04 06:53:01] 2025-06-04 03:40:53,281 | INFO     | zombie collector waiting for pid 11637
[2025-06-04 06:53:01] 2025-06-04 03:40:53,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:53:01] 2025-06-04 03:40:53,282 | INFO     | collected zombie processes
[2025-06-04 06:53:01] 2025-06-04 03:40:53,282 | INFO     | will attempt to kill all subprocesses of pid=11637
[2025-06-04 06:53:01] 2025-06-04 03:40:53,398 | INFO     | process IDs to be killed: [11637] (in reverse order)
[2025-06-04 06:53:01] 2025-06-04 03:40:54,250 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:53:01] 2025-06-04 03:40:54,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:53:01] 2025-06-04 03:40:54,254 | INFO     | did not find any defunct processes belonging to 11637
[2025-06-04 06:53:01] 2025-06-04 03:40:54,257 | INFO     | did not find any defunct processes belonging to 11637
[2025-06-04 06:53:01] 2025-06-04 03:40:54,257 | INFO     | ready for new job
[2025-06-04 06:53:01] 2025-06-04 03:40:54,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:53:01] 2025-06-04 03:40:54,259 | INFO     | **************************************
[2025-06-04 06:53:01] 2025-06-04 03:40:54,260 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:53:01] 2025-06-04 03:40:54,260 | INFO     | **************************************
[2025-06-04 06:53:01] 2025-06-04 03:40:54,260 | INFO     | 
[2025-06-04 06:53:01] 2025-06-04 03:40:54,263 | INFO     | pilot is running in a VM
[2025-06-04 06:53:01] 2025-06-04 03:40:54,263 | INFO     | architecture information:
[2025-06-04 06:53:01] 2025-06-04 03:40:54,271 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:53:01] 2025-06-04 03:40:54,423 | INFO     | cat /etc/os-release:
[2025-06-04 06:53:01] NAME="CentOS Linux"
[2025-06-04 06:53:01] VERSION="7 (Core)"
[2025-06-04 06:53:01] ID="centos"
[2025-06-04 06:53:01] ID_LIKE="rhel fedora"
[2025-06-04 06:53:01] VERSION_ID="7"
[2025-06-04 06:53:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:53:01] ANSI_COLOR="0;31"
[2025-06-04 06:53:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:53:01] HOME_URL="https://www.centos.org/"
[2025-06-04 06:53:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:53:01] 
[2025-06-04 06:53:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:53:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:53:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:53:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:53:01] 
[2025-06-04 06:53:01] 2025-06-04 03:40:54,423 | INFO     | **************************************
[2025-06-04 06:53:01] 2025-06-04 03:40:54,927 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 06:53:01] 2025-06-04 03:40:55,127 | INFO     | sufficient remaining disk space (496702062592 B)
[2025-06-04 06:53:01] 2025-06-04 03:40:55,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:53:01] 2025-06-04 03:40:55,127 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:53:01] 2025-06-04 03:40:55,127 | INFO     | update_server=False
[2025-06-04 06:53:01] 2025-06-04 03:40:55,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:53:01] 2025-06-04 03:40:55,128 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 06:53:01] 2025-06-04 03:40:55,129 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:53:01] 2025-06-04 03:40:55,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:53:01] 2025-06-04 03:40:55,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:53:01] 2025-06-04 03:40:55,288 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:53:01] 2025-06-04 03:40:55,288 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:53:01] 2025-06-04 03:40:55,289 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:53:01] 2025-06-04 03:40:55,289 | INFO     | will abort loop
[2025-06-04 06:53:01] 2025-06-04 03:40:55,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:53:01] 2025-06-04 03:40:55,693 | INFO     | all payload control threads have been joined
[2025-06-04 06:53:01] 2025-06-04 03:40:56,044 | INFO     | all data control threads have been joined
[2025-06-04 06:53:01] 2025-06-04 03:40:56,133 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:56,157 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:56,296 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:56,374 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:56,394 | INFO     | all job control threads have been joined
[2025-06-04 06:53:01] 2025-06-04 03:40:56,502 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:56,699 | INFO     | [payload] control thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:56,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:53:01] 2025-06-04 03:40:57,050 | INFO     | [data] control thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,081 | INFO     | [job] validate thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,122 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,154 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,293 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,363 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,400 | INFO     | [job] control thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,424 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:57,715 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:40:58,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:53:01] 2025-06-04 03:41:02,248 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:53:01] 2025-06-04 03:41:03,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623553984320)>', '<ExcThread(monitor, started 139623103702784)>']
[2025-06-04 06:53:01] 2025-06-04 03:41:04,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:53:01] 2025-06-04 03:41:04,183 | INFO     | [monitor] control thread has ended
[2025-06-04 06:53:01] 2025-06-04 03:41:08,419 | INFO     | all workflow threads have been joined
[2025-06-04 06:53:01] 2025-06-04 03:41:08,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:53:01] 2025-06-04 03:41:08,420 | INFO     | traces error code: 0
[2025-06-04 06:53:01] 2025-06-04 03:41:08,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:53:01] 2025-06-04 03:41:08,732 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:53:01] 2025-06-04 03:41:08,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:53:01] 2025-06-04 03:41:08,845 [wrapper] pilotpid: 3038
[2025-06-04 06:53:01] 2025-06-04 03:41:08,892 [wrapper] Pilot exit status: 0
[2025-06-04 06:53:01] 2025-06-04 03:41:09,080 [wrapper] pandaids: 6677636282
[2025-06-04 06:53:01] 2025-06-04 03:41:10,148 [wrapper] cleanup supervisor_pilot  4696 3039
[2025-06-04 06:53:01] 2025-06-04 03:41:10,193 [wrapper] Test setup, not cleaning
[2025-06-04 06:53:01] 2025-06-04 03:41:10,229 [wrapper] apfmon messages muted
[2025-06-04 06:53:01] 2025-06-04 03:41:10,241 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:53:01] 2025-06-04 03:41:10,294 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:53:01]  *** Error codes and diagnostics ***
[2025-06-04 06:53:01]     "exeErrorCode": 0,
[2025-06-04 06:53:01]     "exeErrorDiag": "",
[2025-06-04 06:53:01]     "pilotErrorCode": 0,
[2025-06-04 06:53:01]     "pilotErrorDiag": "",
[2025-06-04 06:53:01]  *** Listing of results directory ***
[2025-06-04 06:53:01] total 394868
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc    495897 Jun  3 15:40 pilot3.tar.gz
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:42 queuedata.json
[2025-06-04 06:53:01] -rwx------. 1 boinc boinc     37140 Jun  3 15:43 runpilot2-wrapper.sh
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:53:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:30 run_atlas
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:30 job.xml
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc      6392 Jun  4 01:30 init_data.xml
[2025-06-04 06:53:01] -rw-r--r--. 2 boinc boinc 215103882 Jun  4 01:30 EVNT.45006593._001383.pool.root.1
[2025-06-04 06:53:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:30 start_atlas.sh
[2025-06-04 06:53:01] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:30 shared
[2025-06-04 06:53:01] -rw-r--r--. 2 boinc boinc    508885 Jun  4 01:30 input.tar.gz
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:30 boinc_lockfile
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc      2524 Jun  4 01:41 pandaJob.out
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc    986077 Jun  4 01:44 agis_schedconf.cvmfs.json
[2025-06-04 06:53:01] drwx------. 4 boinc boinc      4096 Jun  4 01:44 pilot3
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc 182267025 Jun  4 05:37 HITS.45006595._034381.pool.root.1
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:38 boinc_task_state.xml
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc      1019 Jun  4 05:39 memory_monitor_summary.json
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc   1603667 Jun  4 05:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc    371672 Jun  4 05:39 log.45006595._034381.job.log.tgz.1
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc        95 Jun  4 05:40 pilot_heartbeat.json
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc      7689 Jun  4 05:40 heartbeat.json
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc      4725 Jun  4 05:41 pilotlog.txt
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc   1205603 Jun  4 05:41 log.45006595._034381.job.log.1
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc       357 Jun  4 05:41 output.list
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:41 runtime_log
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc   1597440 Jun  4 05:41 result.tar.gz
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:41 runtime_log.err
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc       657 Jun  4 05:41 CQBNDma6gg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNoYKDmdW2eMn.diag
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:53 boinc_mmap_file
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:53 wrapper_checkpoint.txt
[2025-06-04 06:53:01] -rw-r--r--. 1 boinc boinc     20517 Jun  4 06:53 stderr.txt
[2025-06-04 06:53:01] HITS file was successfully produced:
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc 182267025 Jun  4 05:37 shared/HITS.pool.root.1
[2025-06-04 06:53:01]  *** Contents of shared directory: ***
[2025-06-04 06:53:01] total 390136
[2025-06-04 06:53:01] -rw-r--r--. 2 boinc boinc 215103882 Jun  4 01:30 ATLAS.root_0
[2025-06-04 06:53:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:30 start_atlas.sh
[2025-06-04 06:53:01] -rw-r--r--. 2 boinc boinc    508885 Jun  4 01:30 input.tar.gz
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc 182267025 Jun  4 05:37 HITS.pool.root.1
[2025-06-04 06:53:01] -rw-------. 1 boinc boinc   1597440 Jun  4 05:41 result.tar.gz
06:53:03 (25464): run_atlas exited; CPU time 49467.200042
06:53:03 (25464): called boinc_finish(0)

</stderr_txt>
]]>

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