Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:58:29 (31178): wrapper (7.7.26015): starting
00:58:29 (31178): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:58:29] Arguments: --nthreads 8
[2025-06-04 00:58:29] Threads: 8
[2025-06-04 00:58:29] Checking for CVMFS
[2025-06-04 00:58:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:58:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:58:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:58:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:58:32] 2.11.2.0 27084 32386 90496 146760 1 212 13019536 25165824 3507 130560 0 16275409 99.807 18865487 2054 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:58:32] CVMFS is ok
[2025-06-04 00:58:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:58:32] Checking for apptainer binary...
[2025-06-04 00:58:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:58:32] Running /usr/bin/apptainer --version
[2025-06-04 00:58:32] apptainer version 1.3.2-1.el7
[2025-06-04 00:58:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:02:35] cg-vwn405.simple-grid.lan
[2025-06-04 01:02:35] apptainer works
[2025-06-04 01:02:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:02:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:02:35] Starting ATLAS job with PandaID=6677617248
[2025-06-04 01:02:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:02:01]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:02:01] 2025-06-04 03:01:49,121 | INFO     | extracted standard info from prmon json
[2025-06-04 05:02:01] 2025-06-04 03:01:49,121 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:02:01] 2025-06-04 03:01:49,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:02:01] 2025-06-04 03:01:49,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:02:01] 2025-06-04 03:01:49,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:02:01] 2025-06-04 03:01:49,128 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:02:01] 2025-06-04 03:01:49,128 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,130 | INFO     | sum of deviations: 79664086948.49998
[2025-06-04 05:02:01] 2025-06-04 03:01:49,130 | INFO     | mean x: 1748999257.5
[2025-06-04 05:02:01] 2025-06-04 03:01:49,131 | INFO     | mean y: 2436732.9776785714
[2025-06-04 05:02:01] 2025-06-04 03:01:49,131 | INFO     | -- intersect: -39977157737.68855
[2025-06-04 05:02:01] 2025-06-04 03:01:49,131 | INFO     | intersect: -39977157737.68855
[2025-06-04 05:02:01] 2025-06-04 03:01:49,131 | INFO     | chi2: 6.265479068793831
[2025-06-04 05:02:01] 2025-06-04 03:01:49,132 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,134 | INFO     | sum of deviations: 93353917733.99998
[2025-06-04 05:02:01] 2025-06-04 03:01:49,134 | INFO     | mean x: 1748999105.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,134 | INFO     | mean y: 2445694.127853881
[2025-06-04 05:02:01] 2025-06-04 03:01:49,134 | INFO     | -- intersect: -50130176664.93204
[2025-06-04 05:02:01] 2025-06-04 03:01:49,134 | INFO     | intersect: -50130176664.93204
[2025-06-04 05:02:01] 2025-06-04 03:01:49,135 | INFO     | chi2: 5.475262446374573
[2025-06-04 05:02:01] 2025-06-04 03:01:49,135 | INFO     | current chi2=5.475262446374573 (change=12.61222986690758 %)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,135 | INFO     | right removable region: 218
[2025-06-04 05:02:01] 2025-06-04 03:01:49,135 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,137 | INFO     | sum of deviations: 4747304382.000019
[2025-06-04 05:02:01] 2025-06-04 03:01:49,137 | INFO     | mean x: 1748999410.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,137 | INFO     | mean y: 2486735.319634703
[2025-06-04 05:02:01] 2025-06-04 03:01:49,138 | INFO     | -- intersect: -2546895926.769459
[2025-06-04 05:02:01] 2025-06-04 03:01:49,138 | INFO     | intersect: -2546895926.769459
[2025-06-04 05:02:01] 2025-06-04 03:01:49,138 | INFO     | chi2: 1.8046320017327466
[2025-06-04 05:02:01] 2025-06-04 03:01:49,138 | INFO     | current chi2=1.8046320017327466 (change=71.19722240042282 %)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,139 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 05:02:01] 2025-06-04 03:01:49,140 | INFO     | sum of deviations: -25658599092.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,141 | INFO     | mean x: 1748999562.5
[2025-06-04 05:02:01] 2025-06-04 03:01:49,141 | INFO     | mean y: 2507862.5140186916
[2025-06-04 05:02:01] 2025-06-04 03:01:49,141 | INFO     | -- intersect: 14770191540.470493
[2025-06-04 05:02:01] 2025-06-04 03:01:49,141 | INFO     | intersect: 14770191540.470493
[2025-06-04 05:02:01] 2025-06-04 03:01:49,141 | INFO     | chi2: 0.920875412410203
[2025-06-04 05:02:01] 2025-06-04 03:01:49,142 | INFO     | current chi2=0.920875412410203 (change=48.97156808002908 %)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,142 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,144 | INFO     | sum of deviations: -29798844711.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,144 | INFO     | mean x: 1748999715.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,144 | INFO     | mean y: 2510857.5454545454
[2025-06-04 05:02:01] 2025-06-04 03:01:49,144 | INFO     | -- intersect: 18413699418.22743
[2025-06-04 05:02:01] 2025-06-04 03:01:49,144 | INFO     | intersect: 18413699418.22743
[2025-06-04 05:02:01] 2025-06-04 03:01:49,145 | INFO     | chi2: 0.8844591297028803
[2025-06-04 05:02:01] 2025-06-04 03:01:49,145 | INFO     | current chi2=0.8844591297028803 (change=3.9545287252279326 %)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,145 | INFO     | left removable region: 30
[2025-06-04 05:02:01] 2025-06-04 03:01:49,145 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,147 | INFO     | sum of deviations: -11817166500.999998
[2025-06-04 05:02:01] 2025-06-04 03:01:49,147 | INFO     | mean x: 1748999989.5
[2025-06-04 05:02:01] 2025-06-04 03:01:49,147 | INFO     | mean y: 2519977.904255319
[2025-06-04 05:02:01] 2025-06-04 03:01:49,148 | INFO     | -- intersect: 10033964544.50295
[2025-06-04 05:02:01] 2025-06-04 03:01:49,148 | INFO     | intersect: 10033964544.50295
[2025-06-04 05:02:01] 2025-06-04 03:01:49,148 | INFO     | chi2: 0.020052235272572126
[2025-06-04 05:02:01] 2025-06-04 03:01:49,148 | INFO     | -- intersect: 10033964544.50295
[2025-06-04 05:02:01] 2025-06-04 03:01:49,148 | INFO     | current memory leak: -5.74 B/s (using 188 data points, chi2=0.02)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,149 | INFO     | ..............................
[2025-06-04 05:02:01] 2025-06-04 03:01:49,149 | INFO     | . Timing measurements:
[2025-06-04 05:02:01] 2025-06-04 03:01:49,149 | INFO     | . get job = 0 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | . initial setup = 9 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | . payload setup = 163 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | . stage-in = 0 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | . payload execution = 13790 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | . stage-out = 2 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | . log creation = 0 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,150 | INFO     | ..............................
[2025-06-04 05:02:01] 2025-06-04 03:01:49,331 | INFO     | 
[2025-06-04 05:02:01] 2025-06-04 03:01:49,331 | INFO     | job summary report
[2025-06-04 05:02:01] 2025-06-04 03:01:49,331 | INFO     | --------------------------------------------------
[2025-06-04 05:02:01] 2025-06-04 03:01:49,331 | INFO     | PanDA job id: 6677617248
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | task id: 45006595
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | errors: (none)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | pilot state: finished 
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | transexitcode: 0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | exeerrorcode: 0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | exeerrordiag: 
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | exitcode: 0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | exitmsg: OK
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | cpuconsumptiontime: 50303 s
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | nevents: 400
[2025-06-04 05:02:01] 2025-06-04 03:01:49,332 | INFO     | neventsw: 0
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | pid: 21270
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | pgrp: 21270
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | corecount: 8
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | event service: False
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | sizes: {0: 2404957, 1: 2405212, 12: 2405212, 23: 2405240, 34: 2405268, 44: 2405296, 55: 2405452, 66: 2405480, 77: 2405508, 86: 2405770, 87: 2405798, 13958: 2435825
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | --------------------------------------------------
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | 
[2025-06-04 05:02:01] 2025-06-04 03:01:49,333 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 05:02:01] 2025-06-04 03:01:49,393 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:02:01] 2025-06-04 03:01:49,395 | INFO     | job 6677617248 has completed (purged errors)
[2025-06-04 05:02:01] 2025-06-04 03:01:49,396 | INFO     | overall cleanup function is called
[2025-06-04 05:02:01] 2025-06-04 03:01:50,404 | INFO     | --- collectZombieJob: --- 10, [21270]
[2025-06-04 05:02:01] 2025-06-04 03:01:50,405 | INFO     | zombie collector waiting for pid 21270
[2025-06-04 05:02:01] 2025-06-04 03:01:50,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:02:01] 2025-06-04 03:01:50,405 | INFO     | collected zombie processes
[2025-06-04 05:02:01] 2025-06-04 03:01:50,405 | INFO     | will attempt to kill all subprocesses of pid=21270
[2025-06-04 05:02:01] 2025-06-04 03:01:50,505 | INFO     | process IDs to be killed: [21270] (in reverse order)
[2025-06-04 05:02:01] 2025-06-04 03:01:50,590 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:02:01] 2025-06-04 03:01:50,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:02:01] 2025-06-04 03:01:50,594 | INFO     | did not find any defunct processes belonging to 21270
[2025-06-04 05:02:01] 2025-06-04 03:01:50,597 | INFO     | did not find any defunct processes belonging to 21270
[2025-06-04 05:02:01] 2025-06-04 03:01:50,598 | INFO     | ready for new job
[2025-06-04 05:02:01] 2025-06-04 03:01:50,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:02:01] 2025-06-04 03:01:50,602 | INFO     | **************************************
[2025-06-04 05:02:01] 2025-06-04 03:01:50,602 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:02:01] 2025-06-04 03:01:50,603 | INFO     | **************************************
[2025-06-04 05:02:01] 2025-06-04 03:01:50,603 | INFO     | 
[2025-06-04 05:02:01] 2025-06-04 03:01:50,603 | INFO     | pilot is running in a VM
[2025-06-04 05:02:01] 2025-06-04 03:01:50,603 | INFO     | architecture information:
[2025-06-04 05:02:01] 2025-06-04 03:01:50,604 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:02:01] 2025-06-04 03:01:50,625 | INFO     | cat /etc/os-release:
[2025-06-04 05:02:01] NAME="CentOS Linux"
[2025-06-04 05:02:01] VERSION="7 (Core)"
[2025-06-04 05:02:01] ID="centos"
[2025-06-04 05:02:01] ID_LIKE="rhel fedora"
[2025-06-04 05:02:01] VERSION_ID="7"
[2025-06-04 05:02:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:02:01] ANSI_COLOR="0;31"
[2025-06-04 05:02:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:02:01] HOME_URL="https://www.centos.org/"
[2025-06-04 05:02:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:02:01] 
[2025-06-04 05:02:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:02:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:02:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:02:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:02:01] 
[2025-06-04 05:02:01] 2025-06-04 03:01:50,626 | INFO     | **************************************
[2025-06-04 05:02:01] 2025-06-04 03:01:51,130 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 05:02:01] 2025-06-04 03:01:51,163 | INFO     | sufficient remaining disk space (497057529856 B)
[2025-06-04 05:02:01] 2025-06-04 03:01:51,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:02:01] 2025-06-04 03:01:51,164 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:02:01] 2025-06-04 03:01:51,164 | INFO     | update_server=False
[2025-06-04 05:02:01] 2025-06-04 03:01:51,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:02:01] 2025-06-04 03:01:51,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:01] 2025-06-04 03:01:51,165 | INFO     | aborting loop
[2025-06-04 05:02:01] 2025-06-04 03:01:51,167 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:02:01] 2025-06-04 03:01:51,167 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:02:01] 2025-06-04 03:01:51,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:02:01] 2025-06-04 03:01:51,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:02:01] 2025-06-04 03:01:51,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:02:01] 2025-06-04 03:01:51,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:02:01] 2025-06-04 03:01:51,587 | INFO     | all data control threads have been joined
[2025-06-04 05:02:01] 2025-06-04 03:01:51,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:02:01] 2025-06-04 03:01:51,910 | INFO     | all payload control threads have been joined
[2025-06-04 05:02:01] 2025-06-04 03:01:52,170 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,171 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,178 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,179 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,228 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,243 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,247 | INFO     | all job control threads have been joined
[2025-06-04 05:02:01] 2025-06-04 03:01:52,499 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,567 | INFO     | [job] validate thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,590 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,593 | INFO     | [data] control thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,853 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:52,916 | INFO     | [payload] control thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:53,049 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:53,174 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:53,253 | INFO     | [job] control thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:55,682 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:02:01] 2025-06-04 03:01:56,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924686722880)>', '<ExcThread(monitor, started 139924120528640)>']
[2025-06-04 05:02:01] 2025-06-04 03:01:57,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:02:01] 2025-06-04 03:01:57,206 | INFO     | [monitor] control thread has ended
[2025-06-04 05:02:01] 2025-06-04 03:02:01,238 | INFO     | all workflow threads have been joined
[2025-06-04 05:02:01] 2025-06-04 03:02:01,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:02:01] 2025-06-04 03:02:01,239 | INFO     | traces error code: 0
[2025-06-04 05:02:01] 2025-06-04 03:02:01,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:02:01] 2025-06-04 03:02:01,460 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:02:01] 2025-06-04 03:02:01,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:02:01] 2025-06-04 03:02:01,473 [wrapper] pilotpid: 10672
[2025-06-04 05:02:01] 2025-06-04 03:02:01,477 [wrapper] Pilot exit status: 0
[2025-06-04 05:02:01] 2025-06-04 03:02:01,514 [wrapper] pandaids: 6677617248
[2025-06-04 05:02:01] 2025-06-04 03:02:01,570 [wrapper] cleanup supervisor_pilot 17776 10673
[2025-06-04 05:02:01] 2025-06-04 03:02:01,587 [wrapper] Test setup, not cleaning
[2025-06-04 05:02:01] 2025-06-04 03:02:01,601 [wrapper] apfmon messages muted
[2025-06-04 05:02:01] 2025-06-04 03:02:01,608 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:02:01] 2025-06-04 03:02:01,613 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:02:01]  *** Error codes and diagnostics ***
[2025-06-04 05:02:01]     "exeErrorCode": 0,
[2025-06-04 05:02:01]     "exeErrorDiag": "",
[2025-06-04 05:02:01]     "pilotErrorCode": 0,
[2025-06-04 05:02:01]     "pilotErrorDiag": "",
[2025-06-04 05:02:01]  *** Listing of results directory ***
[2025-06-04 05:02:01] total 393300
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:15 queuedata.json
[2025-06-04 05:02:01] -rwx------. 1 boinc boinc     37140 Jun  3 14:16 runpilot2-wrapper.sh
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:02:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:58 run_atlas
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:58 job.xml
[2025-06-04 05:02:01] -rw-r--r--. 2 boinc boinc 214874186 Jun  4 00:58 EVNT.45006593._001283.pool.root.1
[2025-06-04 05:02:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:58 start_atlas.sh
[2025-06-04 05:02:01] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:58 shared
[2025-06-04 05:02:01] -rw-r--r--. 2 boinc boinc    508883 Jun  4 00:58 input.tar.gz
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc      6392 Jun  4 00:58 init_data.xml
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:58 boinc_lockfile
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc      2525 Jun  4 01:02 pandaJob.out
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc    986861 Jun  4 01:06 agis_schedconf.cvmfs.json
[2025-06-04 05:02:01] drwx------. 4 boinc boinc      4096 Jun  4 01:06 pilot3
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc 180858998 Jun  4 05:00 HITS.45006595._031875.pool.root.1
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:01 boinc_task_state.xml
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc      1018 Jun  4 05:01 memory_monitor_summary.json
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc        95 Jun  4 05:01 pilot_heartbeat.json
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc   1603667 Jun  4 05:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc    380971 Jun  4 05:01 log.45006595._031875.job.log.tgz.1
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc      7696 Jun  4 05:01 heartbeat.json
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc      8192 Jun  4 05:01 boinc_mmap_file
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc        28 Jun  4 05:01 wrapper_checkpoint.txt
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc      4539 Jun  4 05:02 pilotlog.txt
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc   1210676 Jun  4 05:02 log.45006595._031875.job.log.1
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc       357 Jun  4 05:02 output.list
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:02 runtime_log
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc   1607680 Jun  4 05:02 result.tar.gz
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:02 runtime_log.err
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc       656 Jun  4 05:02 eHwKDmPkfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQ0jKDm8SFS2n.diag
[2025-06-04 05:02:01] -rw-r--r--. 1 boinc boinc     20509 Jun  4 05:02 stderr.txt
[2025-06-04 05:02:01] HITS file was successfully produced:
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc 180858998 Jun  4 05:00 shared/HITS.pool.root.1
[2025-06-04 05:02:01]  *** Contents of shared directory: ***
[2025-06-04 05:02:01] total 388552
[2025-06-04 05:02:01] -rw-r--r--. 2 boinc boinc 214874186 Jun  4 00:58 ATLAS.root_0
[2025-06-04 05:02:01] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:58 start_atlas.sh
[2025-06-04 05:02:01] -rw-r--r--. 2 boinc boinc    508883 Jun  4 00:58 input.tar.gz
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc 180858998 Jun  4 05:00 HITS.pool.root.1
[2025-06-04 05:02:01] -rw-------. 1 boinc boinc   1607680 Jun  4 05:02 result.tar.gz
05:02:02 (31178): run_atlas exited; CPU time 50492.486122
05:02:02 (31178): called boinc_finish(0)

</stderr_txt>
]]>

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