Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:47:15 (6751): wrapper (7.7.26015): starting
10:47:15 (6751): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:47:15] Arguments: --nthreads 8
[2025-06-03 10:47:15] Threads: 8
[2025-06-03 10:47:15] Checking for CVMFS
[2025-06-03 10:47:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:47:16] 2.11.2.0 2853 34380 94300 146746 3 56 11880458 20275201 1 130560 0 11047629 99.955 6618049 7630 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 10:47:16] CVMFS is ok
[2025-06-03 10:47:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:47:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:47:16] Further information can be found at the LHC@home message board.
[2025-06-03 10:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:47:16] Checking for apptainer binary...
[2025-06-03 10:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:47:16] Running /usr/bin/apptainer --version
[2025-06-03 10:47:16] apptainer version 1.3.2-1.el7
[2025-06-03 10:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:47:17] c-204-7.aglt2.org
[2025-06-03 10:47:17] apptainer works
[2025-06-03 10:47:18] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:47:18] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:47:18] Starting ATLAS job with PandaID=6666805483
[2025-06-03 10:47:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:43:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:43:13] 2025-06-03 17:42:58,632 | INFO     | executing command: lscpu
[2025-06-03 13:43:13] 2025-06-03 17:42:58,657 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 13:43:13] 2025-06-03 17:42:59,313 | INFO     | monitor loop #772: job 0:6666805483 is in state 'finished'
[2025-06-03 13:43:13] 2025-06-03 17:42:59,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:43:13] 2025-06-03 17:43:01,816 | INFO     | monitor loop #773: job 0:6666805483 is in state 'finished'
[2025-06-03 13:43:13] 2025-06-03 17:43:01,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,391 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 13:43:13] 2025-06-03 17:43:02,392 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666805483/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,393 | INFO     | extracted standard info from prmon json
[2025-06-03 13:43:13] 2025-06-03 17:43:02,393 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:43:13] 2025-06-03 17:43:02,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:43:13] 2025-06-03 17:43:02,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:43:13] 2025-06-03 17:43:02,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:43:13] 2025-06-03 17:43:02,398 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:43:13] 2025-06-03 17:43:02,399 | INFO     | sum of square deviations: 1577789583.0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,400 | INFO     | sum of deviations: 3835670362.000002
[2025-06-03 13:43:13] 2025-06-03 17:43:02,400 | INFO     | mean x: 1748967303.5
[2025-06-03 13:43:13] 2025-06-03 17:43:02,400 | INFO     | mean y: 2502451.3255813955
[2025-06-03 13:43:13] 2025-06-03 17:43:02,400 | INFO     | -- intersect: -4249307880.3072214
[2025-06-03 13:43:13] 2025-06-03 17:43:02,400 | INFO     | intersect: -4249307880.3072214
[2025-06-03 13:43:13] 2025-06-03 17:43:02,400 | INFO     | chi2: 1.5880474429213804
[2025-06-03 13:43:13] 2025-06-03 17:43:02,401 | INFO     | sum of square deviations: 1444149868.0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,402 | INFO     | sum of deviations: 3794553800.000001
[2025-06-03 13:43:13] 2025-06-03 17:43:02,402 | INFO     | mean x: 1748967151.0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,402 | INFO     | mean y: 2502404.3952095807
[2025-06-03 13:43:13] 2025-06-03 17:43:02,402 | INFO     | -- intersect: -4592969364.814706
[2025-06-03 13:43:13] 2025-06-03 17:43:02,402 | INFO     | intersect: -4592969364.814706
[2025-06-03 13:43:13] 2025-06-03 17:43:02,403 | INFO     | chi2: 1.588750186023098
[2025-06-03 13:43:13] 2025-06-03 17:43:02,403 | INFO     | current chi2=1.588750186023098 (change=-0.04425202186810638 %)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,403 | INFO     | right removable region: 166
[2025-06-03 13:43:13] 2025-06-03 17:43:02,403 | INFO     | sum of square deviations: 1444149868.0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,404 | INFO     | sum of deviations: -21604550926.000004
[2025-06-03 13:43:13] 2025-06-03 17:43:02,404 | INFO     | mean x: 1748967456.0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,404 | INFO     | mean y: 2531082.4071856285
[2025-06-03 13:43:13] 2025-06-03 17:43:02,404 | INFO     | -- intersect: 26167167667.803925
[2025-06-03 13:43:13] 2025-06-03 17:43:02,405 | INFO     | intersect: 26167167667.803925
[2025-06-03 13:43:13] 2025-06-03 17:43:02,405 | INFO     | chi2: 0.1432925757108486
[2025-06-03 13:43:13] 2025-06-03 17:43:02,405 | INFO     | current chi2=0.1432925757108486 (change=90.97680762942153 %)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,405 | INFO     | sum of square deviations: 1318277740.5
[2025-06-03 13:43:13] 2025-06-03 17:43:02,406 | INFO     | sum of deviations: -18556427407.999985
[2025-06-03 13:43:13] 2025-06-03 17:43:02,406 | INFO     | mean x: 1748967608.5
[2025-06-03 13:43:13] 2025-06-03 17:43:02,406 | INFO     | mean y: 2527338.5679012346
[2025-06-03 13:43:13] 2025-06-03 17:43:02,407 | INFO     | -- intersect: 24621459653.82047
[2025-06-03 13:43:13] 2025-06-03 17:43:02,407 | INFO     | intersect: 24621459653.82047
[2025-06-03 13:43:13] 2025-06-03 17:43:02,407 | INFO     | chi2: 0.1311207511313798
[2025-06-03 13:43:13] 2025-06-03 17:43:02,407 | INFO     | current chi2=0.1311207511313798 (change=8.494386062283114 %)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,407 | INFO     | left removable region: 20
[2025-06-03 13:43:13] 2025-06-03 17:43:02,408 | INFO     | sum of square deviations: 964976232.5
[2025-06-03 13:43:13] 2025-06-03 17:43:02,408 | INFO     | sum of deviations: -6575127169.999999
[2025-06-03 13:43:13] 2025-06-03 17:43:02,408 | INFO     | mean x: 1748967730.5
[2025-06-03 13:43:13] 2025-06-03 17:43:02,408 | INFO     | mean y: 2511966.8767123288
[2025-06-03 13:43:13] 2025-06-03 17:43:02,409 | INFO     | -- intersect: 11919577752.498314
[2025-06-03 13:43:13] 2025-06-03 17:43:02,409 | INFO     | intersect: 11919577752.498314
[2025-06-03 13:43:13] 2025-06-03 17:43:02,409 | INFO     | chi2: 0.07441205132253986
[2025-06-03 13:43:13] 2025-06-03 17:43:02,409 | INFO     | -- intersect: 11919577752.498314
[2025-06-03 13:43:13] 2025-06-03 17:43:02,409 | INFO     | current memory leak: -6.81 B/s (using 146 data points, chi2=0.07)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,410 | INFO     | ..............................
[2025-06-03 13:43:13] 2025-06-03 17:43:02,410 | INFO     | . Timing measurements:
[2025-06-03 13:43:13] 2025-06-03 17:43:02,410 | INFO     | . get job = 0 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,410 | INFO     | . initial setup = 3 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,410 | INFO     | . payload setup = 11 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,411 | INFO     | . stage-in = 0 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,411 | INFO     | . payload execution = 10489 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,411 | INFO     | . stage-out = 0 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,411 | INFO     | . log creation = 0 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,411 | INFO     | ..............................
[2025-06-03 13:43:13] 2025-06-03 17:43:02,517 | INFO     | 
[2025-06-03 13:43:13] 2025-06-03 17:43:02,517 | INFO     | job summary report
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | --------------------------------------------------
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | PanDA job id: 6666805483
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | task id: 44871837
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | errors: (none)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | pilot state: finished 
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | transexitcode: 0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,518 | INFO     | exeerrorcode: 0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | exeerrordiag: 
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | exitcode: 0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | exitmsg: OK
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | cpuconsumptiontime: 72815 s
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | nevents: 400
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | neventsw: 0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | pid: 16874
[2025-06-03 13:43:13] 2025-06-03 17:43:02,519 | INFO     | pgrp: 16874
[2025-06-03 13:43:13] 2025-06-03 17:43:02,520 | INFO     | corecount: 8
[2025-06-03 13:43:13] 2025-06-03 17:43:02,520 | INFO     | event service: False
[2025-06-03 13:43:13] 2025-06-03 17:43:02,520 | INFO     | sizes: {0: 2405233, 1: 2405233, 6: 2405467, 11: 2405495, 10504: 2434227, 10505: 2443168, 10507: 2443352, 10512: 2443522}
[2025-06-03 13:43:13] 2025-06-03 17:43:02,520 | INFO     | --------------------------------------------------
[2025-06-03 13:43:13] 2025-06-03 17:43:02,520 | INFO     | 
[2025-06-03 13:43:13] 2025-06-03 17:43:02,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 13:43:13] 2025-06-03 17:43:02,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:43:13] 2025-06-03 17:43:02,542 | INFO     | job 6666805483 has completed (purged errors)
[2025-06-03 13:43:13] 2025-06-03 17:43:02,543 | INFO     | overall cleanup function is called
[2025-06-03 13:43:13] 2025-06-03 17:43:03,550 | INFO     | --- collectZombieJob: --- 10, [16874]
[2025-06-03 13:43:13] 2025-06-03 17:43:03,552 | INFO     | zombie collector waiting for pid 16874
[2025-06-03 13:43:13] 2025-06-03 17:43:03,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:43:13] 2025-06-03 17:43:03,552 | INFO     | collected zombie processes
[2025-06-03 13:43:13] 2025-06-03 17:43:03,553 | INFO     | will attempt to kill all subprocesses of pid=16874
[2025-06-03 13:43:13] 2025-06-03 17:43:03,655 | INFO     | process IDs to be killed: [16874] (in reverse order)
[2025-06-03 13:43:13] 2025-06-03 17:43:03,697 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:43:13] 2025-06-03 17:43:03,697 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:43:13] 2025-06-03 17:43:03,701 | INFO     | did not find any defunct processes belonging to 16874
[2025-06-03 13:43:13] 2025-06-03 17:43:03,704 | INFO     | did not find any defunct processes belonging to 16874
[2025-06-03 13:43:13] 2025-06-03 17:43:03,704 | INFO     | ready for new job
[2025-06-03 13:43:13] 2025-06-03 17:43:03,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:43:13] 2025-06-03 17:43:03,707 | INFO     | **************************************
[2025-06-03 13:43:13] 2025-06-03 17:43:03,707 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:43:13] 2025-06-03 17:43:03,707 | INFO     | **************************************
[2025-06-03 13:43:13] 2025-06-03 17:43:03,707 | INFO     | 
[2025-06-03 13:43:13] 2025-06-03 17:43:03,708 | INFO     | architecture information:
[2025-06-03 13:43:13] 2025-06-03 17:43:03,708 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:43:13] 2025-06-03 17:43:03,724 | INFO     | cat /etc/os-release:
[2025-06-03 13:43:13] NAME="CentOS Linux"
[2025-06-03 13:43:13] VERSION="7 (Core)"
[2025-06-03 13:43:13] ID="centos"
[2025-06-03 13:43:13] ID_LIKE="rhel fedora"
[2025-06-03 13:43:13] VERSION_ID="7"
[2025-06-03 13:43:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:43:13] ANSI_COLOR="0;31"
[2025-06-03 13:43:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:43:13] HOME_URL="https://www.centos.org/"
[2025-06-03 13:43:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:43:13] 
[2025-06-03 13:43:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:43:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:43:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:43:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:43:13] 
[2025-06-03 13:43:13] 2025-06-03 17:43:03,724 | INFO     | **************************************
[2025-06-03 13:43:13] 2025-06-03 17:43:04,228 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 13:43:13] 2025-06-03 17:43:04,246 | INFO     | sufficient remaining disk space (18612224000 B)
[2025-06-03 13:43:13] 2025-06-03 17:43:04,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:43:13] 2025-06-03 17:43:04,247 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:43:13] 2025-06-03 17:43:04,247 | INFO     | update_server=False
[2025-06-03 13:43:13] 2025-06-03 17:43:04,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:43:13] 2025-06-03 17:43:04,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:43:13] 2025-06-03 17:43:04,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:43:13] 2025-06-03 17:43:04,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:43:13] 2025-06-03 17:43:04,320 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 13:43:13] 2025-06-03 17:43:04,320 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 13:43:13] 2025-06-03 17:43:04,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:43:13] 2025-06-03 17:43:04,321 | INFO     | will abort loop
[2025-06-03 13:43:13] 2025-06-03 17:43:04,446 | INFO     | all job control threads have been joined
[2025-06-03 13:43:13] 2025-06-03 17:43:04,900 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:43:13] 2025-06-03 17:43:04,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:43:13] 2025-06-03 17:43:04,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:43:13] 2025-06-03 17:43:05,248 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,252 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,313 | INFO     | all data control threads have been joined
[2025-06-03 13:43:13] 2025-06-03 17:43:05,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,326 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,444 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,450 | INFO     | [job] validate thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,451 | INFO     | [job] control thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,452 | INFO     | all payload control threads have been joined
[2025-06-03 13:43:13] 2025-06-03 17:43:05,491 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,634 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:05,680 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:06,241 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:06,254 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:06,318 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:06,321 | INFO     | [data] control thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:06,458 | INFO     | [payload] control thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:08,255 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:43:13] 2025-06-03 17:43:08,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577028237120)>', '<ExcThread(monitor, started 140576712267520)>']
[2025-06-03 13:43:13] 2025-06-03 17:43:08,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:43:13] 2025-06-03 17:43:08,922 | INFO     | [monitor] control thread has ended
[2025-06-03 13:43:13] 2025-06-03 17:43:13,652 | INFO     | all workflow threads have been joined
[2025-06-03 13:43:13] 2025-06-03 17:43:13,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:43:13] 2025-06-03 17:43:13,655 | INFO     | traces error code: 0
[2025-06-03 13:43:13] 2025-06-03 17:43:13,657 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:43:13] 2025-06-03 17:43:13,799 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:43:13] 2025-06-03 17:43:13,801 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:43:13] 2025-06-03 17:43:13,804 [wrapper] pilotpid: 10338
[2025-06-03 13:43:13] 2025-06-03 17:43:13,806 [wrapper] Pilot exit status: 0
[2025-06-03 13:43:13] 2025-06-03 17:43:13,816 [wrapper] pandaids: 6666805483
[2025-06-03 13:43:13] 2025-06-03 17:43:13,847 [wrapper] cleanup supervisor_pilot  2913 10339
[2025-06-03 13:43:13] 2025-06-03 17:43:13,851 [wrapper] Test setup, not cleaning
[2025-06-03 13:43:13] 2025-06-03 17:43:13,855 [wrapper] apfmon messages muted
[2025-06-03 13:43:13] 2025-06-03 17:43:13,858 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:43:13] 2025-06-03 17:43:13,862 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:43:13]  *** Error codes and diagnostics ***
[2025-06-03 13:43:13]     "exeErrorCode": 0,
[2025-06-03 13:43:13]     "exeErrorDiag": "",
[2025-06-03 13:43:13]     "pilotErrorCode": 0,
[2025-06-03 13:43:13]     "pilotErrorDiag": "",
[2025-06-03 13:43:13]  *** Listing of results directory ***
[2025-06-03 13:43:13] total 413620
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas    495897 May 27 01:18 pilot3.tar.gz
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas      5111 May 27 01:54 queuedata.json
[2025-06-03 13:43:13] -rwx------ 1 boincer umatlas     37140 May 27 01:54 runpilot2-wrapper.sh
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas       100 Jun  3 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:43:13] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 10:47 run_atlas
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas       105 Jun  3 10:47 job.xml
[2025-06-03 13:43:13] -rw-r--r-- 2 boincer umatlas 222752047 Jun  3 10:47 EVNT.44871834._002486.pool.root.1
[2025-06-03 13:43:13] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:47 start_atlas.sh
[2025-06-03 13:43:13] drwxrwx--x 2 boincer umatlas      4096 Jun  3 10:47 shared
[2025-06-03 13:43:13] -rw-r--r-- 2 boincer umatlas    508875 Jun  3 10:47 input.tar.gz
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas         0 Jun  3 10:47 boinc_lockfile
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas      2558 Jun  3 10:47 pandaJob.out
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas    982716 Jun  3 10:47 agis_schedconf.cvmfs.json
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas   1603667 Jun  3 10:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:43:13] drwx------ 4 boincer umatlas      4096 Jun  3 10:47 pilot3
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 13:37 init_data.xml
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas 194358708 Jun  3 13:42 HITS.44871837._063050.pool.root.1
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas        95 Jun  3 13:42 pilot_heartbeat.json
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas       530 Jun  3 13:42 boinc_task_state.xml
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas      1060 Jun  3 13:42 memory_monitor_summary.json
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas    362637 Jun  3 13:42 log.44871837._063050.job.log.tgz.1
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 13:42 boinc_mmap_file
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas        28 Jun  3 13:42 wrapper_checkpoint.txt
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas      7755 Jun  3 13:43 heartbeat.json
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas      4539 Jun  3 13:43 pilotlog.txt
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas    939249 Jun  3 13:43 log.44871837._063050.job.log.1
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas       357 Jun  3 13:43 output.list
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas       620 Jun  3 13:43 runtime_log
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas   1320960 Jun  3 13:43 result.tar.gz
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas       661 Jun  3 13:43 sscLDm0R2d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmThYKDmPVBPPn.diag
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas      8655 Jun  3 13:43 runtime_log.err
[2025-06-03 13:43:13] -rw-r--r-- 1 boincer umatlas     21104 Jun  3 13:43 stderr.txt
[2025-06-03 13:43:13] HITS file was successfully produced:
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas 194358708 Jun  3 13:42 shared/HITS.pool.root.1
[2025-06-03 13:43:13]  *** Contents of shared directory: ***
[2025-06-03 13:43:13] total 409152
[2025-06-03 13:43:13] -rw-r--r-- 2 boincer umatlas 222752047 Jun  3 10:47 ATLAS.root_0
[2025-06-03 13:43:13] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:47 start_atlas.sh
[2025-06-03 13:43:13] -rw-r--r-- 2 boincer umatlas    508875 Jun  3 10:47 input.tar.gz
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas 194358708 Jun  3 13:42 HITS.pool.root.1
[2025-06-03 13:43:13] -rw------- 1 boincer umatlas   1320960 Jun  3 13:43 result.tar.gz
13:43:15 (6751): run_atlas exited; CPU time 72630.551528
13:43:15 (6751): called boinc_finish(0)

</stderr_txt>
]]>

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