Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:24:04 (3107908): wrapper (7.7.26015): starting
22:24:04 (3107908): wrapper: running run_atlas (--nthreads 6)
[2025-06-03 22:24:04] Arguments: --nthreads 6
[2025-06-03 22:24:04] Threads: 6
[2025-06-03 22:24:04] Checking for CVMFS
[2025-06-03 22:24:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:24:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:24:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:24:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:24:05] 2.13.0.0 2450576 36589 60680 146754 0 56 3444864 4097025 0 130560 0 1203729 99.995 152570 41868 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-03 22:24:05] CVMFS is ok
[2025-06-03 22:24:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:24:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:24:05] Further information can be found at the LHC@home message board.
[2025-06-03 22:24:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:24:05] Checking for apptainer binary...
[2025-06-03 22:24:05] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-03 22:24:05] apptainer is not installed, using version from CVMFS
[2025-06-03 22:24:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:24:05] pckeatlas08
[2025-06-03 22:24:05] apptainer works
[2025-06-03 22:24:05] Set ATHENA_PROC_NUMBER=6
[2025-06-03 22:24:05] Set ATHENA_CORE_NUMBER=6
[2025-06-03 22:24:05] Starting ATLAS job with PandaID=6677550485
[2025-06-03 22:24:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:13:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:13:26]  is_altstaged=None
[2025-06-03 23:13:26]  is_tar=False
[2025-06-03 23:13:26]  lfn=log.45006595._026992.job.log.tgz.1
[2025-06-03 23:13:26]  mtime=0
[2025-06-03 23:13:26]  protocol_id=None
[2025-06-03 23:13:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:13:26]  replicas=None
[2025-06-03 23:13:26]  scope=mc23_13p6TeV
[2025-06-03 23:13:26]  status=None
[2025-06-03 23:13:26]  status_code=0
[2025-06-03 23:13:26]  storage_token=
[2025-06-03 23:13:26]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6677550485/log.45006595._026992.job.log.tgz.1
[2025-06-03 23:13:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/30/log.45006595._026992.job.log.tgz.1
[2025-06-03 23:13:26]  workdir=None
[2025-06-03 23:13:26] ]
[2025-06-03 23:13:26] 2025-06-03 21:13:05,005 | INFO     | transferring file log.45006595._026992.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6677550485/log.45006595._026992.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-03 23:13:26] 2025-06-03 21:13:05,005 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6677550485/log.45006595._026992.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._026992.job
[2025-06-03 23:13:26] 2025-06-03 21:13:05,013 | INFO     | adding to output.list: log.45006595._026992.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/30/log.45006595._026992.job.log.tg
[2025-06-03 23:13:26] 2025-06-03 21:13:05,013 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:13:26] 2025-06-03 21:13:05,013 | INFO     | summary of transferred files:
[2025-06-03 23:13:26] 2025-06-03 21:13:05,013 | INFO     |  -- lfn=log.45006595._026992.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:13:26] 2025-06-03 21:13:05,013 | INFO     | stage-out finished correctly
[2025-06-03 23:13:26] 2025-06-03 21:13:06,670 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:13:26] 2025-06-03 21:13:07,374 | INFO     | monitor loop #230: job 0:6677550485 is in state 'finished'
[2025-06-03 23:13:26] 2025-06-03 21:13:07,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:13:26] 2025-06-03 21:13:07,817 | INFO     | job 6677550485 has state=finished
[2025-06-03 23:13:26] 2025-06-03 21:13:07,818 | INFO     | preparing for final server update for job 6677550485 in state='finished'
[2025-06-03 23:13:26] 2025-06-03 21:13:07,819 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:13:26] 2025-06-03 21:13:07,819 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:13:26] 2025-06-03 21:13:07,819 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:13:26] 2025-06-03 21:13:07,819 | INFO     | job 6677550485 has finished - writing final server update
[2025-06-03 23:13:26] 2025-06-03 21:13:07,820 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:13:26] 2025-06-03 21:13:07,835 | INFO     | executing command: lscpu
[2025-06-03 23:13:26] 2025-06-03 21:13:07,859 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:13:26] 2025-06-03 21:13:09,877 | INFO     | monitor loop #231: job 0:6677550485 is in state 'finished'
[2025-06-03 23:13:26] 2025-06-03 21:13:09,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:13:26] 2025-06-03 21:13:12,381 | INFO     | monitor loop #232: job 0:6677550485 is in state 'finished'
[2025-06-03 23:13:26] 2025-06-03 21:13:12,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:13:26] 2025-06-03 21:13:14,884 | INFO     | monitor loop #233: job 0:6677550485 is in state 'finished'
[2025-06-03 23:13:26] 2025-06-03 21:13:14,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:13:26] 2025-06-03 21:13:14,925 | INFO     | PID=3111523 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 23:13:26] 2025-06-03 21:13:15,059 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:13:26] 2025-06-03 21:13:15,060 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6677550485/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:13:26] 2025-06-03 21:13:15,060 | INFO     | extracted standard info from prmon json
[2025-06-03 23:13:26] 2025-06-03 21:13:15,060 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:13:26] 2025-06-03 21:13:15,060 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:13:26] 2025-06-03 21:13:15,060 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:13:26] 2025-06-03 21:13:15,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | sum of square deviations: 21358540.0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | sum of deviations: 239341918.0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | mean x: 1748983807.0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | mean y: 2882030.6341463416
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | -- intersect: -19596076461.76851
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | intersect: -19596076461.76851
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | chi2: 0.00017754647799576295
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | -- intersect: -19596076461.76851
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | current memory leak: 11.21 B/s (using 41 data points, chi2=0.00)
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | ..............................
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | . Timing measurements:
[2025-06-03 23:13:26] 2025-06-03 21:13:15,061 | INFO     | . get job = 0 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | . initial setup = 1 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | . payload setup = 9 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | . stage-in = 0 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | . payload execution = 2900 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | . stage-out = 0 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | . log creation = 0 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,062 | INFO     | ..............................
[2025-06-03 23:13:26] 2025-06-03 21:13:15,099 | INFO     | 
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | job summary report
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | --------------------------------------------------
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | PanDA job id: 6677550485
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | task id: 45006595
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | errors: (none)
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | pilot state: finished 
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | transexitcode: 0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | exeerrorcode: 0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | exeerrordiag: 
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | exitcode: 0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | exitmsg: OK
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | cpuconsumptiontime: 16381 s
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | nevents: 400
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | neventsw: 0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | pid: 3118579
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | pgrp: 3118579
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | corecount: 6
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | event service: False
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 2914: 2430787, 2915: 2439728, 2917: 2439784, 2925: 2440082}
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | --------------------------------------------------
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | 
[2025-06-03 23:13:26] 2025-06-03 21:13:15,100 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,111 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:13:26] 2025-06-03 21:13:15,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:13:26] 2025-06-03 21:13:15,112 | INFO     | job 6677550485 has completed (purged errors)
[2025-06-03 23:13:26] 2025-06-03 21:13:15,112 | INFO     | overall cleanup function is called
[2025-06-03 23:13:26] 2025-06-03 21:13:16,115 | INFO     | --- collectZombieJob: --- 10, [3118579]
[2025-06-03 23:13:26] 2025-06-03 21:13:16,116 | INFO     | zombie collector waiting for pid 3118579
[2025-06-03 23:13:26] 2025-06-03 21:13:16,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:13:26] 2025-06-03 21:13:16,116 | INFO     | collected zombie processes
[2025-06-03 23:13:26] 2025-06-03 21:13:16,116 | INFO     | will attempt to kill all subprocesses of pid=3118579
[2025-06-03 23:13:26] 2025-06-03 21:13:16,155 | INFO     | process IDs to be killed: [3118579] (in reverse order)
[2025-06-03 23:13:26] 2025-06-03 21:13:16,176 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:13:26] 2025-06-03 21:13:16,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:13:26] 2025-06-03 21:13:16,177 | INFO     | did not find any defunct processes belonging to 3118579
[2025-06-03 23:13:26] 2025-06-03 21:13:16,178 | INFO     | did not find any defunct processes belonging to 3118579
[2025-06-03 23:13:26] 2025-06-03 21:13:16,178 | INFO     | ready for new job
[2025-06-03 23:13:26] 2025-06-03 21:13:16,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:13:26] 2025-06-03 21:13:16,179 | INFO     | **************************************
[2025-06-03 23:13:26] 2025-06-03 21:13:16,179 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:13:26] 2025-06-03 21:13:16,179 | INFO     | **************************************
[2025-06-03 23:13:26] 2025-06-03 21:13:16,179 | INFO     | 
[2025-06-03 23:13:26] 2025-06-03 21:13:16,190 | INFO     | architecture information:
[2025-06-03 23:13:26] 2025-06-03 21:13:16,190 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:13:26] 2025-06-03 21:13:16,196 | INFO     | cat /etc/os-release:
[2025-06-03 23:13:26] NAME="CentOS Linux"
[2025-06-03 23:13:26] VERSION="7 (Core)"
[2025-06-03 23:13:26] ID="centos"
[2025-06-03 23:13:26] ID_LIKE="rhel fedora"
[2025-06-03 23:13:26] VERSION_ID="7"
[2025-06-03 23:13:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:13:26] ANSI_COLOR="0;31"
[2025-06-03 23:13:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:13:26] HOME_URL="https://www.centos.org/"
[2025-06-03 23:13:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:13:26] 
[2025-06-03 23:13:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:13:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:13:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:13:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:13:26] 
[2025-06-03 23:13:26] 2025-06-03 21:13:16,197 | INFO     | **************************************
[2025-06-03 23:13:26] 2025-06-03 21:13:16,700 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-03 23:13:26] 2025-06-03 21:13:16,710 | INFO     | sufficient remaining disk space (112151494656 B)
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | INFO     | update_server=False
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:13:26] 2025-06-03 21:13:16,711 | INFO     | aborting loop
[2025-06-03 23:13:26] 2025-06-03 21:13:16,889 | INFO     | all data control threads have been joined
[2025-06-03 23:13:26] 2025-06-03 21:13:16,931 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:13:26] 2025-06-03 21:13:16,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:13:26] 2025-06-03 21:13:16,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:13:26] 2025-06-03 21:13:17,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:13:26] 2025-06-03 21:13:17,524 | INFO     | all payload control threads have been joined
[2025-06-03 23:13:26] 2025-06-03 21:13:17,716 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:17,717 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:17,718 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:17,895 | INFO     | [data] control thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:18,011 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:18,021 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:18,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:13:26] 2025-06-03 21:13:18,128 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:18,245 | INFO     | all job control threads have been joined
[2025-06-03 23:13:26] 2025-06-03 21:13:18,530 | INFO     | [payload] control thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:18,941 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:19,008 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:19,009 | INFO     | [job] validate thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:19,095 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:19,116 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:19,251 | INFO     | [job] control thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:20,066 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:21,219 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:13:26] 2025-06-03 21:13:21,762 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480424601408)>', '<ExcThread(monitor, started 140479580595968)>']
[2025-06-03 23:13:26] 2025-06-03 21:13:21,958 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:13:26] 2025-06-03 21:13:21,959 | INFO     | [monitor] control thread has ended
[2025-06-03 23:13:26] 2025-06-03 21:13:26,788 | INFO     | all workflow threads have been joined
[2025-06-03 23:13:26] 2025-06-03 21:13:26,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:13:26] 2025-06-03 21:13:26,788 | INFO     | traces error code: 0
[2025-06-03 23:13:26] 2025-06-03 21:13:26,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:13:26] 2025-06-03 21:13:26,845 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:13:26] 2025-06-03 21:13:26,847 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:13:26] 2025-06-03 21:13:26,848 [wrapper] pilotpid: 3111523
[2025-06-03 23:13:26] 2025-06-03 21:13:26,850 [wrapper] Pilot exit status: 0
[2025-06-03 23:13:26] 2025-06-03 21:13:26,854 [wrapper] pandaids: 6677550485
[2025-06-03 23:13:26] 2025-06-03 21:13:26,869 [wrapper] cleanup supervisor_pilot 3132549 3111524
[2025-06-03 23:13:26] 2025-06-03 21:13:26,871 [wrapper] Test setup, not cleaning
[2025-06-03 23:13:26] 2025-06-03 21:13:26,873 [wrapper] apfmon messages muted
[2025-06-03 23:13:26] 2025-06-03 21:13:26,875 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:13:26] 2025-06-03 21:13:26,877 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:13:26]  *** Error codes and diagnostics ***
[2025-06-03 23:13:26]     "exeErrorCode": 0,
[2025-06-03 23:13:26]     "exeErrorDiag": "",
[2025-06-03 23:13:26]     "pilotErrorCode": 0,
[2025-06-03 23:13:26]     "pilotErrorDiag": "",
[2025-06-03 23:13:26]  *** Listing of results directory ***
[2025-06-03 23:13:26] total 392236
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 11:07 pilot3.tar.gz
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 11:20 queuedata.json
[2025-06-03 23:13:26] -rwx------ 1 boinc boinc     37140 Jun  3 11:20 runpilot2-wrapper.sh
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc       100 Jun  3 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:13:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 22:24 run_atlas
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc       105 Jun  3 22:24 job.xml
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc      6517 Jun  3 22:24 init_data.xml
[2025-06-03 23:13:26] -rw-r--r-- 2 boinc boinc 218707722 Jun  3 22:24 EVNT.45006593._001079.pool.root.1
[2025-06-03 23:13:26] -rw-r--r-- 2 boinc boinc     15093 Jun  3 22:24 start_atlas.sh
[2025-06-03 23:13:26] drwxrwx--x 2 boinc boinc        68 Jun  3 22:24 shared
[2025-06-03 23:13:26] -rw-r--r-- 2 boinc boinc    508880 Jun  3 22:24 input.tar.gz
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc         0 Jun  3 22:24 boinc_lockfile
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc      2525 Jun  3 22:24 pandaJob.out
[2025-06-03 23:13:26] -rw------- 1 boinc boinc    986893 Jun  3 22:24 agis_schedconf.cvmfs.json
[2025-06-03 23:13:26] -rw------- 1 boinc boinc   1603667 Jun  3 22:24 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:13:26] drwx------ 4 boinc boinc      4096 Jun  3 22:24 pilot3
[2025-06-03 23:13:26] -rw------- 1 boinc boinc        95 Jun  3 23:12 pilot_heartbeat.json
[2025-06-03 23:13:26] -rw------- 1 boinc boinc 177975017 Jun  3 23:12 HITS.45006595._026992.pool.root.1
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc       529 Jun  3 23:12 boinc_task_state.xml
[2025-06-03 23:13:26] -rw------- 1 boinc boinc      1009 Jun  3 23:13 memory_monitor_summary.json
[2025-06-03 23:13:26] -rw------- 1 boinc boinc    268546 Jun  3 23:13 log.45006595._026992.job.log.tgz.1
[2025-06-03 23:13:26] -rw------- 1 boinc boinc      7661 Jun  3 23:13 heartbeat.json
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc      8192 Jun  3 23:13 boinc_mmap_file
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc        27 Jun  3 23:13 wrapper_checkpoint.txt
[2025-06-03 23:13:26] -rw------- 1 boinc boinc      4354 Jun  3 23:13 pilotlog.txt
[2025-06-03 23:13:26] -rw------- 1 boinc boinc    306456 Jun  3 23:13 log.45006595._026992.job.log.1
[2025-06-03 23:13:26] -rw------- 1 boinc boinc       357 Jun  3 23:13 output.list
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc       620 Jun  3 23:13 runtime_log
[2025-06-03 23:13:26] -rw------- 1 boinc boinc    593920 Jun  3 23:13 result.tar.gz
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc      8672 Jun  3 23:13 runtime_log.err
[2025-06-03 23:13:26] -rw------- 1 boinc boinc       648 Jun  3 23:13 mBlNDmpzcg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg6XKDm4B2Jwn.diag
[2025-06-03 23:13:26] -rw-r--r-- 1 boinc boinc     21617 Jun  3 23:13 stderr.txt
[2025-06-03 23:13:26] HITS file was successfully produced:
[2025-06-03 23:13:26] -rw------- 1 boinc boinc 177975017 Jun  3 23:12 shared/HITS.pool.root.1
[2025-06-03 23:13:26]  *** Contents of shared directory: ***
[2025-06-03 23:13:26] total 388484
[2025-06-03 23:13:26] -rw-r--r-- 2 boinc boinc 218707722 Jun  3 22:24 ATLAS.root_0
[2025-06-03 23:13:26] -rw-r--r-- 2 boinc boinc     15093 Jun  3 22:24 start_atlas.sh
[2025-06-03 23:13:26] -rw-r--r-- 2 boinc boinc    508880 Jun  3 22:24 input.tar.gz
[2025-06-03 23:13:26] -rw------- 1 boinc boinc 177975017 Jun  3 23:12 HITS.pool.root.1
[2025-06-03 23:13:26] -rw------- 1 boinc boinc    593920 Jun  3 23:13 result.tar.gz
23:13:28 (3107908): run_atlas exited; CPU time 16391.529522
23:13:28 (3107908): called boinc_finish(0)

</stderr_txt>
]]>

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