Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:22:20 (24821): wrapper (7.7.26015): starting
00:22:20 (24821): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:22:20] Arguments: --nthreads 8
[2025-06-04 00:22:20] Threads: 8
[2025-06-04 00:22:20] Checking for CVMFS
[2025-06-04 00:22:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:22:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:22:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:22:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:22:21] 2.11.2.0 26010 32396 94544 146757 0 154 24256282 25165824 4008 130560 0 16571847 99.784 19508608 2066 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:22:21] CVMFS is ok
[2025-06-04 00:22:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:22:21] Checking for apptainer binary...
[2025-06-04 00:22:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:22:21] Running /usr/bin/apptainer --version
[2025-06-04 00:22:21] apptainer version 1.3.2-1.el7
[2025-06-04 00:22:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:22:22] cg-vwn216.simple-grid.lan
[2025-06-04 00:22:22] apptainer works
[2025-06-04 00:22:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:22:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:22:22] Starting ATLAS job with PandaID=6677601792
[2025-06-04 00:22:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:46:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:46:52] 2025-06-04 02:11:41,157 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6677601792/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,158 | INFO     | extracted standard info from prmon json
[2025-06-04 07:46:52] 2025-06-04 02:11:41,158 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:46:52] 2025-06-04 02:11:41,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:46:52] 2025-06-04 02:11:41,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:46:52] 2025-06-04 02:11:41,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:46:52] 2025-06-04 02:11:41,163 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:46:52] 2025-06-04 02:11:41,164 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,166 | INFO     | sum of deviations: 27416374543.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,166 | INFO     | mean x: 1748996194.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,166 | INFO     | mean y: 2462719.152466368
[2025-06-04 07:46:52] 2025-06-04 02:11:41,167 | INFO     | -- intersect: -13942411748.639814
[2025-06-04 07:46:52] 2025-06-04 02:11:41,167 | INFO     | intersect: -13942411748.639814
[2025-06-04 07:46:52] 2025-06-04 02:11:41,167 | INFO     | chi2: 2.5865375915577964
[2025-06-04 07:46:52] 2025-06-04 02:11:41,168 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 07:46:52] 2025-06-04 02:11:41,170 | INFO     | sum of deviations: 41183315184.499985
[2025-06-04 07:46:52] 2025-06-04 02:11:41,170 | INFO     | mean x: 1748996041.5
[2025-06-04 07:46:52] 2025-06-04 02:11:41,170 | INFO     | mean y: 2471822.3348623854
[2025-06-04 07:46:52] 2025-06-04 02:11:41,170 | INFO     | -- intersect: -22419374101.686222
[2025-06-04 07:46:52] 2025-06-04 02:11:41,170 | INFO     | intersect: -22419374101.686222
[2025-06-04 07:46:52] 2025-06-04 02:11:41,173 | INFO     | chi2: 1.8226505085629598
[2025-06-04 07:46:52] 2025-06-04 02:11:41,173 | INFO     | current chi2=1.8226505085629598 (change=29.533190837360674 %)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,174 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,175 | INFO     | sum of deviations: 40004819798.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,175 | INFO     | mean x: 1748995889.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,175 | INFO     | mean y: 2470990.215962441
[2025-06-04 07:46:52] 2025-06-04 02:11:41,176 | INFO     | -- intersect: -23347881742.739136
[2025-06-04 07:46:52] 2025-06-04 02:11:41,176 | INFO     | intersect: -23347881742.739136
[2025-06-04 07:46:52] 2025-06-04 02:11:41,176 | INFO     | chi2: 1.823648206412515
[2025-06-04 07:46:52] 2025-06-04 02:11:41,176 | INFO     | current chi2=1.823648206412515 (change=-0.05473884570124128 %)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,176 | INFO     | right removable region: 212
[2025-06-04 07:46:52] 2025-06-04 02:11:41,177 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 07:46:52] 2025-06-04 02:11:41,178 | INFO     | sum of deviations: -14127914882.000002
[2025-06-04 07:46:52] 2025-06-04 02:11:41,179 | INFO     | mean x: 1748996346.5
[2025-06-04 07:46:52] 2025-06-04 02:11:41,179 | INFO     | mean y: 2490535.853211009
[2025-06-04 07:46:52] 2025-06-04 02:11:41,179 | INFO     | -- intersect: 7694294474.744794
[2025-06-04 07:46:52] 2025-06-04 02:11:41,179 | INFO     | intersect: 7694294474.744794
[2025-06-04 07:46:52] 2025-06-04 02:11:41,179 | INFO     | chi2: 0.8823348141280432
[2025-06-04 07:46:52] 2025-06-04 02:11:41,179 | INFO     | current chi2=0.8823348141280432 (change=65.88741578672985 %)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,180 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,181 | INFO     | sum of deviations: -23986834251.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,181 | INFO     | mean x: 1748996499.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,182 | INFO     | mean y: 2497496.192488263
[2025-06-04 07:46:52] 2025-06-04 02:11:41,182 | INFO     | -- intersect: 14003341366.587482
[2025-06-04 07:46:52] 2025-06-04 02:11:41,182 | INFO     | intersect: 14003341366.587482
[2025-06-04 07:46:52] 2025-06-04 02:11:41,182 | INFO     | chi2: 0.8005004375700346
[2025-06-04 07:46:52] 2025-06-04 02:11:41,182 | INFO     | current chi2=0.8005004375700346 (change=9.27475321699511 %)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,182 | INFO     | left removable region: 20
[2025-06-04 07:46:52] 2025-06-04 02:11:41,183 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,184 | INFO     | sum of deviations: -9080879009.000002
[2025-06-04 07:46:52] 2025-06-04 02:11:41,184 | INFO     | mean x: 1748996468.5
[2025-06-04 07:46:52] 2025-06-04 02:11:41,184 | INFO     | mean y: 2507359.9166666665
[2025-06-04 07:46:52] 2025-06-04 02:11:41,185 | INFO     | -- intersect: 7239306069.117399
[2025-06-04 07:46:52] 2025-06-04 02:11:41,185 | INFO     | intersect: 7239306069.117399
[2025-06-04 07:46:52] 2025-06-04 02:11:41,185 | INFO     | chi2: 0.013905629547914869
[2025-06-04 07:46:52] 2025-06-04 02:11:41,185 | INFO     | -- intersect: 7239306069.117399
[2025-06-04 07:46:52] 2025-06-04 02:11:41,185 | INFO     | current memory leak: -4.14 B/s (using 192 data points, chi2=0.01)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,186 | INFO     | ..............................
[2025-06-04 07:46:52] 2025-06-04 02:11:41,186 | INFO     | . Timing measurements:
[2025-06-04 07:46:52] 2025-06-04 02:11:41,186 | INFO     | . get job = 0 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,186 | INFO     | . initial setup = 2 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,186 | INFO     | . payload setup = 14 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,186 | INFO     | . stage-in = 0 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,187 | INFO     | . payload execution = 13611 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,187 | INFO     | . stage-out = 3 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,187 | INFO     | . log creation = 1 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,187 | INFO     | ..............................
[2025-06-04 07:46:52] 2025-06-04 02:11:41,319 | INFO     | 
[2025-06-04 07:46:52] 2025-06-04 02:11:41,320 | INFO     | job summary report
[2025-06-04 07:46:52] 2025-06-04 02:11:41,320 | INFO     | --------------------------------------------------
[2025-06-04 07:46:52] 2025-06-04 02:11:41,320 | INFO     | PanDA job id: 6677601792
[2025-06-04 07:46:52] 2025-06-04 02:11:41,320 | INFO     | task id: 45006595
[2025-06-04 07:46:52] 2025-06-04 02:11:41,320 | INFO     | errors: (none)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | pilot state: finished 
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | transexitcode: 0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | exeerrorcode: 0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | exeerrordiag: 
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | exitcode: 0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | exitmsg: OK
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | cpuconsumptiontime: 51334 s
[2025-06-04 07:46:52] 2025-06-04 02:11:41,321 | INFO     | nevents: 400
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | neventsw: 0
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | pid: 4696
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | pgrp: 4696
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | corecount: 8
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | event service: False
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | sizes: {0: 2405134, 1: 2405134, 11: 2405396, 13626: 2435020, 13627: 2435019, 13631: 2444018, 13633: 2444202, 13718: 2444372}
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | --------------------------------------------------
[2025-06-04 07:46:52] 2025-06-04 02:11:41,322 | INFO     | 
[2025-06-04 07:46:52] 2025-06-04 02:11:41,323 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-04 07:46:52] 2025-06-04 02:11:41,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,685 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:46:52] 2025-06-04 02:11:41,685 | INFO     | job 6677601792 has completed (purged errors)
[2025-06-04 07:46:52] 2025-06-04 02:11:41,685 | INFO     | overall cleanup function is called
[2025-06-04 07:46:52] 2025-06-04 02:11:42,693 | INFO     | --- collectZombieJob: --- 10, [4696]
[2025-06-04 07:46:52] 2025-06-04 02:11:42,694 | INFO     | zombie collector waiting for pid 4696
[2025-06-04 07:46:52] 2025-06-04 02:11:42,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:46:52] 2025-06-04 02:11:42,694 | INFO     | collected zombie processes
[2025-06-04 07:46:52] 2025-06-04 02:11:42,694 | INFO     | will attempt to kill all subprocesses of pid=4696
[2025-06-04 07:46:52] 2025-06-04 02:11:42,811 | INFO     | process IDs to be killed: [4696] (in reverse order)
[2025-06-04 07:46:52] 2025-06-04 02:11:43,525 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:46:52] 2025-06-04 02:11:43,526 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:46:52] 2025-06-04 02:11:43,529 | INFO     | did not find any defunct processes belonging to 4696
[2025-06-04 07:46:52] 2025-06-04 02:11:43,539 | INFO     | did not find any defunct processes belonging to 4696
[2025-06-04 07:46:52] 2025-06-04 02:11:43,539 | INFO     | ready for new job
[2025-06-04 07:46:52] 2025-06-04 02:11:43,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:46:52] 2025-06-04 02:11:43,541 | INFO     | **************************************
[2025-06-04 07:46:52] 2025-06-04 02:11:43,541 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:46:52] 2025-06-04 02:11:43,541 | INFO     | **************************************
[2025-06-04 07:46:52] 2025-06-04 02:11:43,541 | INFO     | 
[2025-06-04 07:46:52] 2025-06-04 02:11:43,542 | INFO     | pilot is running in a VM
[2025-06-04 07:46:52] 2025-06-04 02:11:43,542 | INFO     | architecture information:
[2025-06-04 07:46:52] 2025-06-04 02:11:43,551 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:46:52] 2025-06-04 02:11:43,804 | INFO     | cat /etc/os-release:
[2025-06-04 07:46:52] NAME="CentOS Linux"
[2025-06-04 07:46:52] VERSION="7 (Core)"
[2025-06-04 07:46:52] ID="centos"
[2025-06-04 07:46:52] ID_LIKE="rhel fedora"
[2025-06-04 07:46:52] VERSION_ID="7"
[2025-06-04 07:46:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:46:52] ANSI_COLOR="0;31"
[2025-06-04 07:46:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:46:52] HOME_URL="https://www.centos.org/"
[2025-06-04 07:46:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:46:52] 
[2025-06-04 07:46:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:46:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:46:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:46:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:46:52] 
[2025-06-04 07:46:52] 2025-06-04 02:11:43,805 | INFO     | **************************************
[2025-06-04 07:46:52] 2025-06-04 02:11:44,309 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-04 07:46:52] 2025-06-04 02:11:44,569 | INFO     | sufficient remaining disk space (496874029056 B)
[2025-06-04 07:46:52] 2025-06-04 02:11:44,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:46:52] 2025-06-04 02:11:44,570 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:46:52] 2025-06-04 02:11:44,570 | INFO     | update_server=False
[2025-06-04 07:46:52] 2025-06-04 02:11:44,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:46:52] 2025-06-04 02:11:44,608 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:46:52] 2025-06-04 02:11:44,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:46:52] 2025-06-04 02:11:44,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:46:52] 2025-06-04 02:11:45,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:46:52] 2025-06-04 02:11:45,186 | INFO     | aborting loop
[2025-06-04 07:46:52] 2025-06-04 02:11:45,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:46:52] 2025-06-04 02:11:45,447 | INFO     | all data control threads have been joined
[2025-06-04 07:46:52] 2025-06-04 02:11:45,576 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:45,590 | INFO     | all payload control threads have been joined
[2025-06-04 07:46:52] 2025-06-04 02:11:45,673 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:45,879 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:45,999 | INFO     | all job control threads have been joined
[2025-06-04 07:46:52] 2025-06-04 02:11:46,153 | INFO     | [job] validate thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,192 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,267 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:46:52] 2025-06-04 02:11:46,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,454 | INFO     | [data] control thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,597 | INFO     | [payload] control thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,693 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,799 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:46,895 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:47,006 | INFO     | [job] control thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:47,336 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:47,346 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:47,951 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:46:52] 2025-06-04 02:11:51,961 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:46:52] 2025-06-04 02:11:52,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549151405888)>', '<ExcThread(monitor, started 140548924507904)>']
[2025-06-04 07:46:52] 2025-06-04 02:11:53,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:46:52] 2025-06-04 02:11:53,663 | INFO     | [monitor] control thread has ended
[2025-06-04 07:46:52] 2025-06-04 02:11:57,716 | INFO     | all workflow threads have been joined
[2025-06-04 07:46:52] 2025-06-04 02:11:57,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:46:52] 2025-06-04 02:11:57,717 | INFO     | traces error code: 0
[2025-06-04 07:46:52] 2025-06-04 02:11:57,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:46:52] 2025-06-04 02:11:58,051 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:46:52] 2025-06-04 02:11:58,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:46:52] 2025-06-04 02:11:58,264 [wrapper] pilotpid: 28540
[2025-06-04 07:46:52] 2025-06-04 02:11:58,371 [wrapper] Pilot exit status: 0
[2025-06-04 07:46:52] 2025-06-04 02:11:58,888 [wrapper] pandaids: 6677601792
[2025-06-04 07:46:52] 2025-06-04 02:11:59,825 [wrapper] cleanup supervisor_pilot 30413 28541
[2025-06-04 07:46:52] 2025-06-04 02:11:59,891 [wrapper] Test setup, not cleaning
[2025-06-04 07:46:52] 2025-06-04 02:12:00,003 [wrapper] apfmon messages muted
[2025-06-04 07:46:52] 2025-06-04 02:12:00,113 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:46:52] 2025-06-04 02:12:00,215 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:46:52]  *** Error codes and diagnostics ***
[2025-06-04 07:46:52]     "exeErrorCode": 0,
[2025-06-04 07:46:52]     "exeErrorDiag": "",
[2025-06-04 07:46:52]     "pilotErrorCode": 0,
[2025-06-04 07:46:52]     "pilotErrorDiag": "",
[2025-06-04 07:46:52]  *** Listing of results directory ***
[2025-06-04 07:46:52] total 392664
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:50 queuedata.json
[2025-06-04 07:46:52] -rwx------. 1 boinc boinc     37140 Jun  3 13:50 runpilot2-wrapper.sh
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc    495897 Jun  3 13:50 pilot3.tar.gz
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:46:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:22 run_atlas
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:22 job.xml
[2025-06-04 07:46:52] -rw-r--r--. 2 boinc boinc 213691924 Jun  4 00:22 EVNT.45006593._001262.pool.root.1
[2025-06-04 07:46:52] -rw-r--r--. 2 boinc boinc    508869 Jun  4 00:22 input.tar.gz
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc      6392 Jun  4 00:22 init_data.xml
[2025-06-04 07:46:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:22 start_atlas.sh
[2025-06-04 07:46:52] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:22 shared
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:22 boinc_lockfile
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc      2524 Jun  4 00:22 pandaJob.out
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc    986869 Jun  4 00:22 agis_schedconf.cvmfs.json
[2025-06-04 07:46:52] drwx------. 4 boinc boinc      4096 Jun  4 00:22 pilot3
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc 181434184 Jun  4 04:08 HITS.45006595._031395.pool.root.1
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc       531 Jun  4 04:08 boinc_task_state.xml
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc      1018 Jun  4 04:10 memory_monitor_summary.json
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc   1603667 Jun  4 04:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc    384096 Jun  4 04:10 log.45006595._031395.job.log.tgz.1
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc        95 Jun  4 04:11 pilot_heartbeat.json
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc      7695 Jun  4 04:11 heartbeat.json
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc      4417 Jun  4 04:11 pilotlog.txt
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc   1188173 Jun  4 04:12 log.45006595._031395.job.log.1
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc       357 Jun  4 04:12 output.list
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:12 runtime_log
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc   1587200 Jun  4 04:12 result.tar.gz
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc       656 Jun  4 04:12 t7CLDmTLfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAtjKDmiSoDPo.diag
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc      8673 Jun  4 04:12 runtime_log.err
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:46 boinc_mmap_file
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc        28 Jun  4 07:46 wrapper_checkpoint.txt
[2025-06-04 07:46:52] -rw-r--r--. 1 boinc boinc     20489 Jun  4 07:46 stderr.txt
[2025-06-04 07:46:52] HITS file was successfully produced:
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc 181434184 Jun  4 04:08 shared/HITS.pool.root.1
[2025-06-04 07:46:52]  *** Contents of shared directory: ***
[2025-06-04 07:46:52] total 387936
[2025-06-04 07:46:52] -rw-r--r--. 2 boinc boinc 213691924 Jun  4 00:22 ATLAS.root_0
[2025-06-04 07:46:52] -rw-r--r--. 2 boinc boinc    508869 Jun  4 00:22 input.tar.gz
[2025-06-04 07:46:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:22 start_atlas.sh
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc 181434184 Jun  4 04:08 HITS.pool.root.1
[2025-06-04 07:46:52] -rw-------. 1 boinc boinc   1587200 Jun  4 04:12 result.tar.gz
07:46:54 (24821): run_atlas exited; CPU time 51513.991045
07:46:54 (24821): called boinc_finish(0)

</stderr_txt>
]]>

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