Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:43:49 (2312233): wrapper (7.7.26015): starting
10:43:49 (2312233): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:43:49] Arguments: --nthreads 8
[2025-06-03 10:43:49] Threads: 8
[2025-06-03 10:43:49] Checking for CVMFS
[2025-06-03 10:43:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:43:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:43:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:43:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:43:50] 2.12.6.0 3235747 90173 596892 146746 0 71 11260500 21042176 4030 16776704 2 240219425 99.287 467046615 25476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 10:43:50] CVMFS is ok
[2025-06-03 10:43:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:43:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:43:50] Further information can be found at the LHC@home message board.
[2025-06-03 10:43:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:43:50] Checking for apptainer binary...
[2025-06-03 10:43:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:43:50] Running /usr/bin/apptainer --version
[2025-06-03 10:43:50] apptainer version 1.4.1-1.el9
[2025-06-03 10:43:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:43:50] c-16-11.aglt2.org
[2025-06-03 10:43:50] apptainer works
[2025-06-03 10:43:50] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:43:50] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:43:50] Starting ATLAS job with PandaID=6677599875
[2025-06-03 10:43:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:33:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:33:36] 2025-06-03 17:33:19,516 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 13:33:36] 2025-06-03 17:33:19,517 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677599875/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,518 | INFO     | extracted standard info from prmon json
[2025-06-03 13:33:36] 2025-06-03 17:33:19,518 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:33:36] 2025-06-03 17:33:19,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:33:36] 2025-06-03 17:33:19,519 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:33:36] 2025-06-03 17:33:19,519 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:33:36] 2025-06-03 17:33:19,525 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:33:36] 2025-06-03 17:33:19,525 | INFO     | sum of square deviations: 1418361477.5
[2025-06-03 13:33:36] 2025-06-03 17:33:19,527 | INFO     | sum of deviations: 28155619146.999992
[2025-06-03 13:33:36] 2025-06-03 17:33:19,527 | INFO     | mean x: 1748966922.5
[2025-06-03 13:33:36] 2025-06-03 17:33:19,527 | INFO     | mean y: 2084938.2771084337
[2025-06-03 13:33:36] 2025-06-03 17:33:19,527 | INFO     | -- intersect: -34716318904.30797
[2025-06-03 13:33:36] 2025-06-03 17:33:19,528 | INFO     | intersect: -34716318904.30797
[2025-06-03 13:33:36] 2025-06-03 17:33:19,528 | INFO     | chi2: 4.185002732179318
[2025-06-03 13:33:36] 2025-06-03 17:33:19,529 | INFO     | sum of square deviations: 1294014960.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,530 | INFO     | sum of deviations: 36925287685.00004
[2025-06-03 13:33:36] 2025-06-03 17:33:19,530 | INFO     | mean x: 1748966770.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,530 | INFO     | mean y: 2095379.3105590062
[2025-06-03 13:33:36] 2025-06-03 17:33:19,531 | INFO     | -- intersect: -49905442887.29131
[2025-06-03 13:33:36] 2025-06-03 17:33:19,531 | INFO     | intersect: -49905442887.29131
[2025-06-03 13:33:36] 2025-06-03 17:33:19,531 | INFO     | chi2: 3.3329462430452237
[2025-06-03 13:33:36] 2025-06-03 17:33:19,531 | INFO     | current chi2=3.3329462430452237 (change=20.359759447286915 %)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,532 | INFO     | right removable region: 160
[2025-06-03 13:33:36] 2025-06-03 17:33:19,532 | INFO     | sum of square deviations: 1294014960.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,533 | INFO     | sum of deviations: -4588687667.999998
[2025-06-03 13:33:36] 2025-06-03 17:33:19,534 | INFO     | mean x: 1748967075.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,534 | INFO     | mean y: 2124920.049689441
[2025-06-03 13:33:36] 2025-06-03 17:33:19,534 | INFO     | -- intersect: 6204111679.762674
[2025-06-03 13:33:36] 2025-06-03 17:33:19,534 | INFO     | intersect: 6204111679.762674
[2025-06-03 13:33:36] 2025-06-03 17:33:19,535 | INFO     | chi2: 1.8898396148374177
[2025-06-03 13:33:36] 2025-06-03 17:33:19,535 | INFO     | current chi2=1.8898396148374177 (change=54.842571539892546 %)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,535 | INFO     | sum of square deviations: 1177156955.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,537 | INFO     | sum of deviations: -23193026916.000004
[2025-06-03 13:33:36] 2025-06-03 17:33:19,537 | INFO     | mean x: 1748967227.5
[2025-06-03 13:33:36] 2025-06-03 17:33:19,537 | INFO     | mean y: 2149137.6923076925
[2025-06-03 13:33:36] 2025-06-03 17:33:19,537 | INFO     | -- intersect: 34461312642.0267
[2025-06-03 13:33:36] 2025-06-03 17:33:19,538 | INFO     | intersect: 34461312642.0267
[2025-06-03 13:33:36] 2025-06-03 17:33:19,538 | INFO     | chi2: 1.1540598883358626
[2025-06-03 13:33:36] 2025-06-03 17:33:19,538 | INFO     | current chi2=1.1540598883358626 (change=38.93344814686055 %)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,539 | INFO     | sum of square deviations: 1067554900.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,540 | INFO     | sum of deviations: -24258695025.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,540 | INFO     | mean x: 1748967380.0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,540 | INFO     | mean y: 2150470.5033112583
[2025-06-03 13:33:36] 2025-06-03 17:33:19,541 | INFO     | -- intersect: 39744992997.93987
[2025-06-03 13:33:36] 2025-06-03 17:33:19,541 | INFO     | intersect: 39744992997.93987
[2025-06-03 13:33:36] 2025-06-03 17:33:19,541 | INFO     | chi2: 1.0749513939432336
[2025-06-03 13:33:36] 2025-06-03 17:33:19,541 | INFO     | current chi2=1.0749513939432336 (change=6.8547997545172725 %)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,542 | INFO     | left removable region: 30
[2025-06-03 13:33:36] 2025-06-03 17:33:19,542 | INFO     | sum of square deviations: 681212772.5
[2025-06-03 13:33:36] 2025-06-03 17:33:19,543 | INFO     | sum of deviations: -1744418098.0000005
[2025-06-03 13:33:36] 2025-06-03 17:33:19,543 | INFO     | mean x: 1748967654.5
[2025-06-03 13:33:36] 2025-06-03 17:33:19,543 | INFO     | mean y: 2141594.969230769
[2025-06-03 13:33:36] 2025-06-03 17:33:19,544 | INFO     | -- intersect: 4480816911.243357
[2025-06-03 13:33:36] 2025-06-03 17:33:19,544 | INFO     | intersect: 4480816911.243357
[2025-06-03 13:33:36] 2025-06-03 17:33:19,544 | INFO     | chi2: 0.0682047264297738
[2025-06-03 13:33:36] 2025-06-03 17:33:19,544 | INFO     | -- intersect: 4480816911.243357
[2025-06-03 13:33:36] 2025-06-03 17:33:19,545 | INFO     | current memory leak: -2.56 B/s (using 130 data points, chi2=0.07)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,545 | INFO     | ..............................
[2025-06-03 13:33:36] 2025-06-03 17:33:19,546 | INFO     | . Timing measurements:
[2025-06-03 13:33:36] 2025-06-03 17:33:19,546 | INFO     | . get job = 0 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,546 | INFO     | . initial setup = 3 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,546 | INFO     | . payload setup = 12 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,546 | INFO     | . stage-in = 0 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,547 | INFO     | . payload execution = 10102 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,547 | INFO     | . stage-out = 0 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,547 | INFO     | . log creation = 0 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,547 | INFO     | ..............................
[2025-06-03 13:33:36] 2025-06-03 17:33:19,730 | INFO     | 
[2025-06-03 13:33:36] 2025-06-03 17:33:19,731 | INFO     | job summary report
[2025-06-03 13:33:36] 2025-06-03 17:33:19,731 | INFO     | --------------------------------------------------
[2025-06-03 13:33:36] 2025-06-03 17:33:19,731 | INFO     | PanDA job id: 6677599875
[2025-06-03 13:33:36] 2025-06-03 17:33:19,731 | INFO     | task id: 45006595
[2025-06-03 13:33:36] 2025-06-03 17:33:19,732 | INFO     | errors: (none)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:33:36] 2025-06-03 17:33:19,732 | INFO     | pilot state: finished 
[2025-06-03 13:33:36] 2025-06-03 17:33:19,732 | INFO     | transexitcode: 0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,732 | INFO     | exeerrorcode: 0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,732 | INFO     | exeerrordiag: 
[2025-06-03 13:33:36] 2025-06-03 17:33:19,733 | INFO     | exitcode: 0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,733 | INFO     | exitmsg: OK
[2025-06-03 13:33:36] 2025-06-03 17:33:19,733 | INFO     | cpuconsumptiontime: 70090 s
[2025-06-03 13:33:36] 2025-06-03 17:33:19,733 | INFO     | nevents: 400
[2025-06-03 13:33:36] 2025-06-03 17:33:19,733 | INFO     | neventsw: 0
[2025-06-03 13:33:36] 2025-06-03 17:33:19,733 | INFO     | pid: 2322771
[2025-06-03 13:33:36] 2025-06-03 17:33:19,734 | INFO     | pgrp: 2322771
[2025-06-03 13:33:36] 2025-06-03 17:33:19,734 | INFO     | corecount: 8
[2025-06-03 13:33:36] 2025-06-03 17:33:19,734 | INFO     | event service: False
[2025-06-03 13:33:36] 2025-06-03 17:33:19,734 | INFO     | sizes: {0: 2405013, 1: 2405212, 2: 2405212, 8: 2405446, 12: 2405474, 10118: 2434104, 10120: 2443045, 10123: 2443101, 10131: 2443271}
[2025-06-03 13:33:36] 2025-06-03 17:33:19,734 | INFO     | --------------------------------------------------
[2025-06-03 13:33:36] 2025-06-03 17:33:19,735 | INFO     | 
[2025-06-03 13:33:36] 2025-06-03 17:33:19,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 13:33:36] 2025-06-03 17:33:19,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,758 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,758 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:33:36] 2025-06-03 17:33:19,761 | INFO     | job 6677599875 has completed (purged errors)
[2025-06-03 13:33:36] 2025-06-03 17:33:19,761 | INFO     | overall cleanup function is called
[2025-06-03 13:33:36] 2025-06-03 17:33:20,770 | INFO     | --- collectZombieJob: --- 10, [2322771]
[2025-06-03 13:33:36] 2025-06-03 17:33:20,771 | INFO     | zombie collector waiting for pid 2322771
[2025-06-03 13:33:36] 2025-06-03 17:33:20,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:33:36] 2025-06-03 17:33:20,771 | INFO     | collected zombie processes
[2025-06-03 13:33:36] 2025-06-03 17:33:20,771 | INFO     | will attempt to kill all subprocesses of pid=2322771
[2025-06-03 13:33:36] 2025-06-03 17:33:22,797 | INFO     | process IDs to be killed: [2322771] (in reverse order)
[2025-06-03 13:33:36] 2025-06-03 17:33:23,257 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:33:36] 2025-06-03 17:33:23,257 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:33:36] 2025-06-03 17:33:23,348 | INFO     | did not find any defunct processes belonging to 2322771
[2025-06-03 13:33:36] 2025-06-03 17:33:23,433 | INFO     | did not find any defunct processes belonging to 2322771
[2025-06-03 13:33:36] 2025-06-03 17:33:23,433 | INFO     | ready for new job
[2025-06-03 13:33:36] 2025-06-03 17:33:23,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:33:36] 2025-06-03 17:33:23,435 | INFO     | **************************************
[2025-06-03 13:33:36] 2025-06-03 17:33:23,435 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:33:36] 2025-06-03 17:33:23,436 | INFO     | **************************************
[2025-06-03 13:33:36] 2025-06-03 17:33:23,436 | INFO     | 
[2025-06-03 13:33:36] 2025-06-03 17:33:23,453 | INFO     | architecture information:
[2025-06-03 13:33:36] 2025-06-03 17:33:23,453 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:33:36] 2025-06-03 17:33:23,466 | INFO     | cat /etc/os-release:
[2025-06-03 13:33:36] NAME="CentOS Linux"
[2025-06-03 13:33:36] VERSION="7 (Core)"
[2025-06-03 13:33:36] ID="centos"
[2025-06-03 13:33:36] ID_LIKE="rhel fedora"
[2025-06-03 13:33:36] VERSION_ID="7"
[2025-06-03 13:33:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:33:36] ANSI_COLOR="0;31"
[2025-06-03 13:33:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:33:36] HOME_URL="https://www.centos.org/"
[2025-06-03 13:33:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:33:36] 
[2025-06-03 13:33:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:33:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:33:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:33:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:33:36] 
[2025-06-03 13:33:36] 2025-06-03 17:33:23,466 | INFO     | **************************************
[2025-06-03 13:33:36] 2025-06-03 17:33:23,969 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 13:33:36] 2025-06-03 17:33:23,981 | INFO     | sufficient remaining disk space (51666485248 B)
[2025-06-03 13:33:36] 2025-06-03 17:33:23,982 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:33:36] 2025-06-03 17:33:23,982 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:33:36] 2025-06-03 17:33:23,982 | INFO     | update_server=False
[2025-06-03 13:33:36] 2025-06-03 17:33:23,982 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:33:36] 2025-06-03 17:33:24,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:33:36] 2025-06-03 17:33:24,191 | INFO     | aborting loop
[2025-06-03 13:33:36] 2025-06-03 17:33:24,317 | INFO     | all payload control threads have been joined
[2025-06-03 13:33:36] 2025-06-03 17:33:24,428 | INFO     | all job control threads have been joined
[2025-06-03 13:33:36] 2025-06-03 17:33:24,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:33:36] 2025-06-03 17:33:24,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:33:36] 2025-06-03 17:33:24,742 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:33:36] 2025-06-03 17:33:24,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:33:36] 2025-06-03 17:33:24,743 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:33:36] 2025-06-03 17:33:24,988 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,045 | INFO     | all data control threads have been joined
[2025-06-03 13:33:36] 2025-06-03 17:33:25,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,196 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,323 | INFO     | [payload] control thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,434 | INFO     | [job] control thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,501 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,676 | INFO     | [job] validate thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,746 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,856 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:25,961 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:26,051 | INFO     | [data] control thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:26,166 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:26,424 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:26,452 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:26,506 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:27,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:33:36] 2025-06-03 17:33:31,061 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:33:36] 2025-06-03 17:33:31,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116147857216)>', '<ExcThread(monitor, started 140115489830656)>']
[2025-06-03 13:33:36] 2025-06-03 17:33:31,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:33:36] 2025-06-03 17:33:31,778 | INFO     | [monitor] control thread has ended
[2025-06-03 13:33:36] 2025-06-03 17:33:36,226 | INFO     | all workflow threads have been joined
[2025-06-03 13:33:36] 2025-06-03 17:33:36,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:33:36] 2025-06-03 17:33:36,227 | INFO     | traces error code: 0
[2025-06-03 13:33:36] 2025-06-03 17:33:36,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:33:36] 2025-06-03 17:33:36,380 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:33:36] 2025-06-03 17:33:36,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:33:36] 2025-06-03 17:33:36,386 [wrapper] pilotpid: 2315909
[2025-06-03 13:33:36] 2025-06-03 17:33:36,388 [wrapper] Pilot exit status: 0
[2025-06-03 13:33:36] 2025-06-03 17:33:36,396 [wrapper] pandaids: 6677599875
[2025-06-03 13:33:36] 2025-06-03 17:33:36,715 [wrapper] cleanup supervisor_pilot 2666647 2315910
[2025-06-03 13:33:36] 2025-06-03 17:33:36,717 [wrapper] Test setup, not cleaning
[2025-06-03 13:33:36] 2025-06-03 17:33:36,719 [wrapper] apfmon messages muted
[2025-06-03 13:33:36] 2025-06-03 17:33:36,721 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:33:36] 2025-06-03 17:33:36,723 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:33:36]  *** Error codes and diagnostics ***
[2025-06-03 13:33:36]     "exeErrorCode": 0,
[2025-06-03 13:33:36]     "exeErrorDiag": "",
[2025-06-03 13:33:36]     "pilotErrorCode": 0,
[2025-06-03 13:33:36]     "pilotErrorDiag": "",
[2025-06-03 13:33:36]  *** Listing of results directory ***
[2025-06-03 13:33:36] total 391716
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:57 pilot3.tar.gz
[2025-06-03 13:33:36] -rwx------. 1 boincer umatlas     37140 Jun  3 07:39 runpilot2-wrapper.sh
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:39 queuedata.json
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas       100 Jun  3 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:33:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 10:43 run_atlas
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas       105 Jun  3 10:43 job.xml
[2025-06-03 13:33:36] -rw-r--r--. 2 boincer umatlas 213243735 Jun  3 10:43 EVNT.45006593._001242.pool.root.1
[2025-06-03 13:33:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:43 start_atlas.sh
[2025-06-03 13:33:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 10:43 shared
[2025-06-03 13:33:36] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 10:43 input.tar.gz
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas         0 Jun  3 10:43 boinc_lockfile
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 10:43 pandaJob.out
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas    982716 Jun  3 10:44 agis_schedconf.cvmfs.json
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas   1603667 Jun  3 10:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:33:36] drwx------. 4 boincer umatlas      4096 Jun  3 10:44 pilot3
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas      6522 Jun  3 13:29 init_data.xml
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas 181791407 Jun  3 13:32 HITS.45006595._030961.pool.root.1
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas       529 Jun  3 13:32 boinc_task_state.xml
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas      1035 Jun  3 13:33 memory_monitor_summary.json
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas    337663 Jun  3 13:33 log.45006595._030961.job.log.tgz.1
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas      7707 Jun  3 13:33 heartbeat.json
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas        95 Jun  3 13:33 pilot_heartbeat.json
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 13:33 boinc_mmap_file
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas        27 Jun  3 13:33 wrapper_checkpoint.txt
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas      4353 Jun  3 13:33 pilotlog.txt
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas    790259 Jun  3 13:33 log.45006595._030961.job.log.1
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas       357 Jun  3 13:33 output.list
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas       620 Jun  3 13:33 runtime_log
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas   1146880 Jun  3 13:33 result.tar.gz
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas      8655 Jun  3 13:33 runtime_log.err
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas       657 Jun  3 13:33 7PeMDmDAfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0pjKDmS0BZdn.diag
[2025-06-03 13:33:36] -rw-r--r--. 1 boincer umatlas     20836 Jun  3 13:33 stderr.txt
[2025-06-03 13:33:36] HITS file was successfully produced:
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas 181791407 Jun  3 13:32 shared/HITS.pool.root.1
[2025-06-03 13:33:36]  *** Contents of shared directory: ***
[2025-06-03 13:33:36] total 387420
[2025-06-03 13:33:36] -rw-r--r--. 2 boincer umatlas 213243735 Jun  3 10:43 ATLAS.root_0
[2025-06-03 13:33:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:43 start_atlas.sh
[2025-06-03 13:33:36] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 10:43 input.tar.gz
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas 181791407 Jun  3 13:32 HITS.pool.root.1
[2025-06-03 13:33:36] -rw-------. 1 boincer umatlas   1146880 Jun  3 13:33 result.tar.gz
13:33:38 (2312233): run_atlas exited; CPU time 71381.063869
13:33:38 (2312233): called boinc_finish(0)

</stderr_txt>
]]>

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