Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:29 (18751): wrapper (7.7.26015): starting
00:29:29 (18751): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:29:29] Arguments: --nthreads 8
[2025-06-04 00:29:29] Threads: 8
[2025-06-04 00:29:29] Checking for CVMFS
[2025-06-04 00:29:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:29:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:29:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:29:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:29:32] 2.11.2.0 9832 32357 89700 146760 3 108 24943745 25165824 3621 130560 0 17504030 99.836 17768498 2068 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:29:32] CVMFS is ok
[2025-06-04 00:29:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:29:32] Checking for apptainer binary...
[2025-06-04 00:29:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:29:32] Running /usr/bin/apptainer --version
[2025-06-04 00:29:32] apptainer version 1.3.2-1.el7
[2025-06-04 00:29:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:29:33] cg-vwn287.simple-grid.lan
[2025-06-04 00:29:33] apptainer works
[2025-06-04 00:29:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:29:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:29:33] Starting ATLAS job with PandaID=6677617153
[2025-06-04 00:29:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:37:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:37:32] 2025-06-04 02:14:55,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:37:32] 2025-06-04 02:14:58,149 | INFO     | monitor loop #946: job 0:6677617153 is in state 'finished'
[2025-06-04 04:37:32] 2025-06-04 02:14:58,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:37:32] 2025-06-04 02:15:00,655 | INFO     | monitor loop #947: job 0:6677617153 is in state 'finished'
[2025-06-04 04:37:32] 2025-06-04 02:15:00,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,476 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 04:37:32] 2025-06-04 02:15:01,477 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6677617153/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,477 | INFO     | extracted standard info from prmon json
[2025-06-04 04:37:32] 2025-06-04 02:15:01,478 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:37:32] 2025-06-04 02:15:01,478 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:37:32] 2025-06-04 02:15:01,478 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:37:32] 2025-06-04 02:15:01,478 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:37:32] 2025-06-04 02:15:01,483 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:37:32] 2025-06-04 02:15:01,483 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,485 | INFO     | sum of deviations: -9229451036.000008
[2025-06-04 04:37:32] 2025-06-04 02:15:01,485 | INFO     | mean x: 1748996504.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,485 | INFO     | mean y: 2516010.0410958906
[2025-06-04 04:37:32] 2025-06-04 02:15:01,486 | INFO     | -- intersect: 4958878919.145192
[2025-06-04 04:37:32] 2025-06-04 02:15:01,486 | INFO     | intersect: 4958878919.145192
[2025-06-04 04:37:32] 2025-06-04 02:15:01,486 | INFO     | chi2: 2.0257146317389143
[2025-06-04 04:37:32] 2025-06-04 02:15:01,486 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 04:37:32] 2025-06-04 02:15:01,488 | INFO     | sum of deviations: -8928469258.499987
[2025-06-04 04:37:32] 2025-06-04 02:15:01,488 | INFO     | mean x: 1748996351.5
[2025-06-04 04:37:32] 2025-06-04 02:15:01,488 | INFO     | mean y: 2516220.612149533
[2025-06-04 04:37:32] 2025-06-04 02:15:01,489 | INFO     | -- intersect: 5141244457.320152
[2025-06-04 04:37:32] 2025-06-04 02:15:01,489 | INFO     | intersect: 5141244457.320152
[2025-06-04 04:37:32] 2025-06-04 02:15:01,489 | INFO     | chi2: 2.0249609311821755
[2025-06-04 04:37:32] 2025-06-04 02:15:01,489 | INFO     | current chi2=2.0249609311821755 (change=0.03720665018309384 %)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,489 | INFO     | right removable region: 213
[2025-06-04 04:37:32] 2025-06-04 02:15:01,490 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 04:37:32] 2025-06-04 02:15:01,491 | INFO     | sum of deviations: -50138461481.5
[2025-06-04 04:37:32] 2025-06-04 02:15:01,491 | INFO     | mean x: 1748996656.5
[2025-06-04 04:37:32] 2025-06-04 02:15:01,492 | INFO     | mean y: 2544394.5
[2025-06-04 04:37:32] 2025-06-04 02:15:01,492 | INFO     | -- intersect: 28859447546.730545
[2025-06-04 04:37:32] 2025-06-04 02:15:01,492 | INFO     | intersect: 28859447546.730545
[2025-06-04 04:37:32] 2025-06-04 02:15:01,492 | INFO     | chi2: 0.22240983999285968
[2025-06-04 04:37:32] 2025-06-04 02:15:01,492 | INFO     | current chi2=0.22240983999285968 (change=89.02067267974768 %)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,493 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,494 | INFO     | sum of deviations: -46686313582.999985
[2025-06-04 04:37:32] 2025-06-04 02:15:01,494 | INFO     | mean x: 1748996809.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,494 | INFO     | mean y: 2541834.4832535884
[2025-06-04 04:37:32] 2025-06-04 02:15:01,495 | INFO     | -- intersect: 28847589444.704235
[2025-06-04 04:37:32] 2025-06-04 02:15:01,495 | INFO     | intersect: 28847589444.704235
[2025-06-04 04:37:32] 2025-06-04 02:15:01,495 | INFO     | chi2: 0.21207065926261814
[2025-06-04 04:37:32] 2025-06-04 02:15:01,495 | INFO     | current chi2=0.21207065926261814 (change=4.648706518818353 %)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,495 | INFO     | left removable region: 20
[2025-06-04 04:37:32] 2025-06-04 02:15:01,496 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,503 | INFO     | sum of deviations: -32632679438.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,503 | INFO     | mean x: 1748996931.0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,503 | INFO     | mean y: 2532209.3937823833
[2025-06-04 04:37:32] 2025-06-04 02:15:01,504 | INFO     | -- intersect: 25606253471.605865
[2025-06-04 04:37:32] 2025-06-04 02:15:01,504 | INFO     | intersect: 25606253471.605865
[2025-06-04 04:37:32] 2025-06-04 02:15:01,504 | INFO     | chi2: 0.18956329238877628
[2025-06-04 04:37:32] 2025-06-04 02:15:01,504 | INFO     | -- intersect: 25606253471.605865
[2025-06-04 04:37:32] 2025-06-04 02:15:01,504 | INFO     | current memory leak: -14.64 B/s (using 193 data points, chi2=0.19)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,505 | INFO     | ..............................
[2025-06-04 04:37:32] 2025-06-04 02:15:01,505 | INFO     | . Timing measurements:
[2025-06-04 04:37:32] 2025-06-04 02:15:01,505 | INFO     | . get job = 0 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,505 | INFO     | . initial setup = 2 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,505 | INFO     | . payload setup = 14 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,506 | INFO     | . stage-in = 0 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,506 | INFO     | . payload execution = 13375 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,506 | INFO     | . stage-out = 1 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,506 | INFO     | . log creation = 0 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,506 | INFO     | ..............................
[2025-06-04 04:37:32] 2025-06-04 02:15:01,659 | INFO     | 
[2025-06-04 04:37:32] 2025-06-04 02:15:01,659 | INFO     | job summary report
[2025-06-04 04:37:32] 2025-06-04 02:15:01,659 | INFO     | --------------------------------------------------
[2025-06-04 04:37:32] 2025-06-04 02:15:01,659 | INFO     | PanDA job id: 6677617153
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | task id: 45006595
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | errors: (none)
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | pilot state: finished 
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | transexitcode: 0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | exeerrorcode: 0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | exeerrordiag: 
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | exitcode: 0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | exitmsg: OK
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | cpuconsumptiontime: 50118 s
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | nevents: 400
[2025-06-04 04:37:32] 2025-06-04 02:15:01,660 | INFO     | neventsw: 0
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | pid: 31325
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | pgrp: 31325
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | corecount: 8
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | event service: False
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | sizes: {0: 2404356, 1: 2405213, 2: 2405213, 11: 2405447, 12: 2405475, 13394: 2435203, 13396: 2444202, 13482: 2444316}
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | --------------------------------------------------
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | 
[2025-06-04 04:37:32] 2025-06-04 02:15:01,661 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 04:37:32] 2025-06-04 02:15:02,096 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,097 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:37:32] 2025-06-04 02:15:02,098 | INFO     | job 6677617153 has completed (purged errors)
[2025-06-04 04:37:32] 2025-06-04 02:15:02,099 | INFO     | overall cleanup function is called
[2025-06-04 04:37:32] 2025-06-04 02:15:03,107 | INFO     | --- collectZombieJob: --- 10, [31325]
[2025-06-04 04:37:32] 2025-06-04 02:15:03,107 | INFO     | zombie collector waiting for pid 31325
[2025-06-04 04:37:32] 2025-06-04 02:15:03,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:37:32] 2025-06-04 02:15:03,108 | INFO     | collected zombie processes
[2025-06-04 04:37:32] 2025-06-04 02:15:03,108 | INFO     | will attempt to kill all subprocesses of pid=31325
[2025-06-04 04:37:32] 2025-06-04 02:15:03,233 | INFO     | process IDs to be killed: [31325] (in reverse order)
[2025-06-04 04:37:32] 2025-06-04 02:15:03,976 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:37:32] 2025-06-04 02:15:03,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:37:32] 2025-06-04 02:15:03,980 | INFO     | did not find any defunct processes belonging to 31325
[2025-06-04 04:37:32] 2025-06-04 02:15:03,983 | INFO     | did not find any defunct processes belonging to 31325
[2025-06-04 04:37:32] 2025-06-04 02:15:03,983 | INFO     | ready for new job
[2025-06-04 04:37:32] 2025-06-04 02:15:03,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:37:32] 2025-06-04 02:15:03,986 | INFO     | **************************************
[2025-06-04 04:37:32] 2025-06-04 02:15:03,986 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:37:32] 2025-06-04 02:15:03,986 | INFO     | **************************************
[2025-06-04 04:37:32] 2025-06-04 02:15:03,986 | INFO     | 
[2025-06-04 04:37:32] 2025-06-04 02:15:03,987 | INFO     | pilot is running in a VM
[2025-06-04 04:37:32] 2025-06-04 02:15:03,987 | INFO     | architecture information:
[2025-06-04 04:37:32] 2025-06-04 02:15:03,998 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:37:32] 2025-06-04 02:15:04,208 | INFO     | cat /etc/os-release:
[2025-06-04 04:37:32] NAME="CentOS Linux"
[2025-06-04 04:37:32] VERSION="7 (Core)"
[2025-06-04 04:37:32] ID="centos"
[2025-06-04 04:37:32] ID_LIKE="rhel fedora"
[2025-06-04 04:37:32] VERSION_ID="7"
[2025-06-04 04:37:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:37:32] ANSI_COLOR="0;31"
[2025-06-04 04:37:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:37:32] HOME_URL="https://www.centos.org/"
[2025-06-04 04:37:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:37:32] 
[2025-06-04 04:37:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:37:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:37:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:37:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:37:32] 
[2025-06-04 04:37:32] 2025-06-04 02:15:04,208 | INFO     | **************************************
[2025-06-04 04:37:32] 2025-06-04 02:15:04,712 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 04:37:32] 2025-06-04 02:15:04,966 | INFO     | sufficient remaining disk space (496918069248 B)
[2025-06-04 04:37:32] 2025-06-04 02:15:04,966 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:37:32] 2025-06-04 02:15:04,966 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:37:32] 2025-06-04 02:15:04,966 | INFO     | update_server=False
[2025-06-04 04:37:32] 2025-06-04 02:15:04,966 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:37:32] 2025-06-04 02:15:04,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:37:32] 2025-06-04 02:15:04,970 | INFO     | aborting loop
[2025-06-04 04:37:32] 2025-06-04 02:15:05,607 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:37:32] 2025-06-04 02:15:05,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:37:32] 2025-06-04 02:15:05,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:37:32] 2025-06-04 02:15:05,697 | INFO     | all data control threads have been joined
[2025-06-04 04:37:32] 2025-06-04 02:15:05,886 | INFO     | all job control threads have been joined
[2025-06-04 04:37:32] 2025-06-04 02:15:05,891 | INFO     | all payload control threads have been joined
[2025-06-04 04:37:32] 2025-06-04 02:15:05,972 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:05,976 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:06,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:37:32] 2025-06-04 02:15:06,128 [wrapper] supervise_pilot (15 min periods counter: 16)
[2025-06-04 04:37:32] 2025-06-04 02:15:06,165 | INFO     | [job] validate thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:06,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:37:32] 2025-06-04 02:15:06,696 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:06,704 | INFO     | [data] control thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:06,777 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:06,892 | INFO     | [job] control thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:06,898 | INFO     | [payload] control thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:07,100 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:37:32] 2025-06-04 02:15:07,293 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:07,353 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:07,377 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:07,381 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:07,679 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:08,030 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:11,109 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:15,618 | INFO     | job.realtimelogging is not enabled
[2025-06-04 04:37:32] 2025-06-04 02:15:16,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:37:32] 2025-06-04 02:15:16,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328318658368)>', '<ExcThread(monitor, started 140327553840896)>']
[2025-06-04 04:37:32] 2025-06-04 02:15:17,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:37:32] 2025-06-04 02:15:17,679 | INFO     | [monitor] control thread has ended
[2025-06-04 04:37:32] 2025-06-04 02:15:21,838 | INFO     | all workflow threads have been joined
[2025-06-04 04:37:32] 2025-06-04 02:15:21,838 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:37:32] 2025-06-04 02:15:21,839 | INFO     | traces error code: 0
[2025-06-04 04:37:32] 2025-06-04 02:15:21,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:37:32] 2025-06-04 02:15:22,100 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:37:32] 2025-06-04 02:15:22,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:37:32] 2025-06-04 02:15:22,221 [wrapper] pilotpid: 22772
[2025-06-04 04:37:32] 2025-06-04 02:15:22,309 [wrapper] Pilot exit status: 0
[2025-06-04 04:37:32] 2025-06-04 02:15:22,840 [wrapper] pandaids: 6677617153
[2025-06-04 04:37:32] 2025-06-04 02:15:23,329 [wrapper] cleanup supervisor_pilot 17150 22773
[2025-06-04 04:37:32] 2025-06-04 02:15:23,342 [wrapper] Test setup, not cleaning
[2025-06-04 04:37:32] 2025-06-04 02:15:23,385 [wrapper] apfmon messages muted
[2025-06-04 04:37:32] 2025-06-04 02:15:23,443 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:37:32] 2025-06-04 02:15:23,542 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:37:32]  *** Error codes and diagnostics ***
[2025-06-04 04:37:32]     "exeErrorCode": 0,
[2025-06-04 04:37:32]     "exeErrorDiag": "",
[2025-06-04 04:37:32]     "pilotErrorCode": 0,
[2025-06-04 04:37:32]     "pilotErrorDiag": "",
[2025-06-04 04:37:32]  *** Listing of results directory ***
[2025-06-04 04:37:32] total 390496
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:14 queuedata.json
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:14 pilot3.tar.gz
[2025-06-04 04:37:32] -rwx------. 1 boinc boinc     37140 Jun  3 14:14 runpilot2-wrapper.sh
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:37:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:29 run_atlas
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:29 job.xml
[2025-06-04 04:37:32] -rw-r--r--. 2 boinc boinc 215216284 Jun  4 00:29 EVNT.45006593._001279.pool.root.1
[2025-06-04 04:37:32] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:29 start_atlas.sh
[2025-06-04 04:37:32] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:29 shared
[2025-06-04 04:37:32] -rw-r--r--. 2 boinc boinc    508886 Jun  4 00:29 input.tar.gz
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc      6392 Jun  4 00:29 init_data.xml
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:29 boinc_lockfile
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc      2525 Jun  4 00:29 pandaJob.out
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc    986861 Jun  4 00:29 agis_schedconf.cvmfs.json
[2025-06-04 04:37:32] drwx------. 4 boinc boinc      4096 Jun  4 00:29 pilot3
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc 177713968 Jun  4 04:12 HITS.45006595._031780.pool.root.1
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc       531 Jun  4 04:13 boinc_task_state.xml
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc      1017 Jun  4 04:13 memory_monitor_summary.json
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc   1603667 Jun  4 04:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc    381199 Jun  4 04:13 log.45006595._031780.job.log.tgz.1
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc        95 Jun  4 04:14 pilot_heartbeat.json
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc      7689 Jun  4 04:15 heartbeat.json
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc      4489 Jun  4 04:15 pilotlog.txt
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc   1171523 Jun  4 04:15 log.45006595._031780.job.log.1
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc       357 Jun  4 04:15 output.list
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:15 runtime_log
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc   1576960 Jun  4 04:15 result.tar.gz
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc       656 Jun  4 04:15 ScMMDmRifg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEzjKDm8dWD9n.diag
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc      8673 Jun  4 04:15 runtime_log.err
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:37 boinc_mmap_file
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc        28 Jun  4 04:37 wrapper_checkpoint.txt
[2025-06-04 04:37:32] -rw-r--r--. 1 boinc boinc     20686 Jun  4 04:37 stderr.txt
[2025-06-04 04:37:32] HITS file was successfully produced:
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc 177713968 Jun  4 04:12 shared/HITS.pool.root.1
[2025-06-04 04:37:32]  *** Contents of shared directory: ***
[2025-06-04 04:37:32] total 385784
[2025-06-04 04:37:32] -rw-r--r--. 2 boinc boinc 215216284 Jun  4 00:29 ATLAS.root_0
[2025-06-04 04:37:32] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:29 start_atlas.sh
[2025-06-04 04:37:32] -rw-r--r--. 2 boinc boinc    508886 Jun  4 00:29 input.tar.gz
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc 177713968 Jun  4 04:12 HITS.pool.root.1
[2025-06-04 04:37:32] -rw-------. 1 boinc boinc   1576960 Jun  4 04:15 result.tar.gz
04:37:34 (18751): run_atlas exited; CPU time 50291.698014
04:37:34 (18751): called boinc_finish(0)

</stderr_txt>
]]>

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