Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:46:36 (3476968): wrapper (7.7.26015): starting
03:46:36 (3476968): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 03:46:36] Arguments: --nthreads 12
[2025-06-04 03:46:36] Threads: 12
[2025-06-04 03:46:36] Checking for CVMFS
[2025-06-04 03:46:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:46:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:46:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:46:37] 2.12.7.0 3454341 50 36796 146748 1 56 3451428 6144000 0 130560 0 49757 99.951 141497 11129 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 03:46:37] CVMFS is ok
[2025-06-04 03:46:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 03:46:37] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 03:46:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 03:46:37] Further information can be found at the LHC@home message board.
[2025-06-04 03:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:46:37] Checking for apptainer binary...
[2025-06-04 03:46:37] apptainer is not installed, using version from CVMFS
[2025-06-04 03:46:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:46:37] aeryn
[2025-06-04 03:46:37] apptainer works
[2025-06-04 03:46:37] Set ATHENA_PROC_NUMBER=12
[2025-06-04 03:46:37] Set ATHENA_CORE_NUMBER=12
[2025-06-04 03:46:37] Starting ATLAS job with PandaID=6677601348
[2025-06-04 03:46:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:34:57]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:34:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:34:57]  replicas=None
[2025-06-04 04:34:57]  scope=mc23_13p6TeV
[2025-06-04 04:34:57]  status=None
[2025-06-04 04:34:57]  status_code=0
[2025-06-04 04:34:57]  storage_token=
[2025-06-04 04:34:57]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6677601348/log.45006595._031144.job.log.tgz.1
[2025-06-04 04:34:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/10/log.45006595._031144.job.log.tgz.1
[2025-06-04 04:34:57]  workdir=None
[2025-06-04 04:34:57] ]
[2025-06-04 04:34:57] 2025-06-03 16:34:24,029 | INFO     | transferring file log.45006595._031144.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6677601348/log.45006595._031144.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 04:34:57] 2025-06-03 16:34:24,029 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6677601348/log.45006595._031144.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.450065
[2025-06-04 04:34:57] 2025-06-03 16:34:24,037 | INFO     | adding to output.list: log.45006595._031144.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/10/log.45006595._031144.job.log.tg
[2025-06-04 04:34:57] 2025-06-03 16:34:24,038 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:34:57] 2025-06-03 16:34:24,038 | INFO     | summary of transferred files:
[2025-06-04 04:34:57] 2025-06-03 16:34:24,038 | INFO     |  -- lfn=log.45006595._031144.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:34:57] 2025-06-03 16:34:24,038 | INFO     | stage-out finished correctly
[2025-06-04 04:34:57] 2025-06-03 16:34:24,858 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:34:57] 2025-06-03 16:34:26,075 | INFO     | job 6677601348 has state=finished
[2025-06-04 04:34:57] 2025-06-03 16:34:26,075 | INFO     | preparing for final server update for job 6677601348 in state='finished'
[2025-06-04 04:34:57] 2025-06-03 16:34:27,204 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 04:34:57] 2025-06-03 16:34:27,204 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:34:57] 2025-06-03 16:34:27,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:34:57] 2025-06-03 16:34:27,204 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:34:57] 2025-06-03 16:34:27,204 | INFO     | job 6677601348 has finished - writing final server update
[2025-06-04 04:34:57] 2025-06-03 16:34:27,205 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:34:57] 2025-06-03 16:34:27,225 | INFO     | executing command: lscpu
[2025-06-04 04:34:57] 2025-06-03 16:34:27,238 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:34:57] 2025-06-03 16:34:27,289 | WARNING  | process 3487343 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 04:34:57] 2025-06-03 16:34:27,289 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6677601348/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:34:57] 2025-06-03 16:34:27,337 | INFO     | number of running child processes to parent process 3487343: 1
[2025-06-04 04:34:57] 2025-06-03 16:34:27,338 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:34:57] 2025-06-03 16:34:29,841 | INFO     | monitor loop #218: job 0:6677601348 is in state 'finished'
[2025-06-04 04:34:57] 2025-06-03 16:34:29,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:34:57] 2025-06-03 16:34:32,297 | INFO     | PID=3480693 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 04:34:57] 2025-06-03 16:34:32,343 | INFO     | monitor loop #219: job 0:6677601348 is in state 'finished'
[2025-06-04 04:34:57] 2025-06-03 16:34:32,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:34:57] 2025-06-03 16:34:34,847 | INFO     | monitor loop #220: job 0:6677601348 is in state 'finished'
[2025-06-04 04:34:57] 2025-06-03 16:34:34,847 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 04:34:57] 2025-06-03 16:34:36,876 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 04:34:57] 2025-06-03 16:34:36,876 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6677601348/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:34:57] 2025-06-03 16:34:36,876 | INFO     | extracted standard info from prmon json
[2025-06-04 04:34:57] 2025-06-03 16:34:36,877 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:34:57] 2025-06-03 16:34:36,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:34:57] 2025-06-03 16:34:36,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:34:57] 2025-06-03 16:34:36,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:34:57] 2025-06-03 16:34:36,878 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:34:57] 2025-06-03 16:34:36,878 | INFO     | sum of square deviations: 19832930.0
[2025-06-04 04:34:57] 2025-06-03 16:34:36,878 | INFO     | sum of deviations: -50075693.000000015
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | mean x: 1748967120.5
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | mean y: 2696087.85
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | -- intersect: 4418621550.867923
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | intersect: 4418621550.867923
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | chi2: 0.012709451664373093
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | -- intersect: 4418621550.867923
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | current memory leak: -2.52 B/s (using 40 data points, chi2=0.01)
[2025-06-04 04:34:57] 2025-06-03 16:34:36,879 | INFO     | ..............................
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . Timing measurements:
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . get job = 0 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . initial setup = 5 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . payload setup = 3 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . stage-in = 0 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . payload execution = 2835 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . stage-out = 0 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | . log creation = 0 s
[2025-06-04 04:34:57] 2025-06-03 16:34:36,880 | INFO     | ..............................
[2025-06-04 04:34:57] 2025-06-03 16:34:37,171 | INFO     | 
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | job summary report
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | --------------------------------------------------
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | PanDA job id: 6677601348
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | task id: 45006595
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | errors: (none)
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | pilot state: finished 
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | transexitcode: 0
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | exeerrorcode: 0
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | exeerrordiag: 
[2025-06-04 04:34:57] 2025-06-03 16:34:37,172 | INFO     | exitcode: 0
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | exitmsg: OK
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | cpuconsumptiontime: 29819 s
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | nevents: 400
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | neventsw: 0
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | pid: 3487343
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | pgrp: 3487343
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | corecount: 12
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | event service: False
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | sizes: {0: 2405020, 1: 2405219, 3: 2405425, 11: 2405453, 2843: 2430756, 2844: 2439711, 2845: 2439895, 2857: 2440065}
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | --------------------------------------------------
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | 
[2025-06-04 04:34:57] 2025-06-03 16:34:37,173 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-06-04 04:34:57] 2025-06-03 16:34:37,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:34:57] 2025-06-03 16:34:37,185 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,185 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:34:57] 2025-06-03 16:34:37,185 | INFO     | job 6677601348 has completed (purged errors)
[2025-06-04 04:34:57] 2025-06-03 16:34:37,185 | INFO     | overall cleanup function is called
[2025-06-04 04:34:57] 2025-06-03 16:34:38,191 | INFO     | --- collectZombieJob: --- 10, [3487343]
[2025-06-04 04:34:57] 2025-06-03 16:34:38,192 | INFO     | zombie collector waiting for pid 3487343
[2025-06-04 04:34:57] 2025-06-03 16:34:38,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:34:57] 2025-06-03 16:34:38,192 | INFO     | collected zombie processes
[2025-06-04 04:34:57] 2025-06-03 16:34:38,192 | INFO     | will attempt to kill all subprocesses of pid=3487343
[2025-06-04 04:34:57] 2025-06-03 16:34:38,239 | INFO     | process IDs to be killed: [3487343] (in reverse order)
[2025-06-04 04:34:57] 2025-06-03 16:34:38,259 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:34:57] 2025-06-03 16:34:38,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:34:57] 2025-06-03 16:34:38,260 | INFO     | did not find any defunct processes belonging to 3487343
[2025-06-04 04:34:57] 2025-06-03 16:34:38,261 | INFO     | did not find any defunct processes belonging to 3487343
[2025-06-04 04:34:57] 2025-06-03 16:34:38,262 | INFO     | ready for new job
[2025-06-04 04:34:57] 2025-06-03 16:34:38,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:34:57] 2025-06-03 16:34:38,262 | INFO     | **************************************
[2025-06-04 04:34:57] 2025-06-03 16:34:38,262 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:34:57] 2025-06-03 16:34:38,262 | INFO     | **************************************
[2025-06-04 04:34:57] 2025-06-03 16:34:38,262 | INFO     | 
[2025-06-04 04:34:57] 2025-06-03 16:34:38,280 | INFO     | architecture information:
[2025-06-04 04:34:57] 2025-06-03 16:34:38,280 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:34:57] 2025-06-03 16:34:38,286 | INFO     | cat /etc/os-release:
[2025-06-04 04:34:57] NAME="CentOS Linux"
[2025-06-04 04:34:57] VERSION="7 (Core)"
[2025-06-04 04:34:57] ID="centos"
[2025-06-04 04:34:57] ID_LIKE="rhel fedora"
[2025-06-04 04:34:57] VERSION_ID="7"
[2025-06-04 04:34:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:34:57] ANSI_COLOR="0;31"
[2025-06-04 04:34:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:34:57] HOME_URL="https://www.centos.org/"
[2025-06-04 04:34:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:34:57] 
[2025-06-04 04:34:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:34:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:34:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:34:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:34:57] 
[2025-06-04 04:34:57] 2025-06-03 16:34:38,287 | INFO     | **************************************
[2025-06-04 04:34:57] 2025-06-03 16:34:38,789 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-06-04 04:34:57] 2025-06-03 16:34:38,795 | INFO     | sufficient remaining disk space (686011973632 B)
[2025-06-04 04:34:57] 2025-06-03 16:34:38,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:34:57] 2025-06-03 16:34:38,795 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:34:57] 2025-06-03 16:34:38,795 | INFO     | update_server=False
[2025-06-04 04:34:57] 2025-06-03 16:34:38,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:34:57] 2025-06-03 16:34:38,796 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:34:57] 2025-06-03 16:34:38,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:34:57] 2025-06-03 16:34:38,796 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:34:57] 2025-06-03 16:34:38,796 | INFO     | aborting loop
[2025-06-04 04:34:57] 2025-06-03 16:34:38,796 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:34:57] 2025-06-03 16:34:38,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:34:57] 2025-06-03 16:34:38,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:34:57] 2025-06-03 16:34:39,079 | INFO     | all job control threads have been joined
[2025-06-04 04:34:57] 2025-06-03 16:34:39,389 | INFO     | all data control threads have been joined
[2025-06-04 04:34:57] 2025-06-03 16:34:39,541 | INFO     | all payload control threads have been joined
[2025-06-04 04:34:57] 2025-06-03 16:34:39,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:34:57] 2025-06-03 16:34:39,800 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:39,801 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:39,801 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:39,894 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:39,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:34:57] 2025-06-03 16:34:39,940 | INFO     | [job] validate thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:39,940 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,014 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,083 | INFO     | [job] control thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,241 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,394 | INFO     | [data] control thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,467 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,546 | INFO     | [payload] control thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:40,575 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:41,621 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:43,943 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:49,378 | INFO     | job.realtimelogging is not enabled
[2025-06-04 04:34:57] 2025-06-03 16:34:50,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:34:57] 2025-06-03 16:34:51,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071004596032)>', '<ExcThread(monitor, started 140070777698048)>']
[2025-06-04 04:34:57] 2025-06-03 16:34:52,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:34:57] 2025-06-03 16:34:52,851 | INFO     | [monitor] control thread has ended
[2025-06-04 04:34:57] 2025-06-03 16:34:56,897 | INFO     | all workflow threads have been joined
[2025-06-04 04:34:57] 2025-06-03 16:34:56,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:34:57] 2025-06-03 16:34:56,898 | INFO     | traces error code: 0
[2025-06-04 04:34:57] 2025-06-03 16:34:56,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:34:57] 2025-06-03 16:34:56,965 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:34:57] 2025-06-03 16:34:56,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:34:57] 2025-06-03 16:34:56,968 [wrapper] pilotpid: 3480693
[2025-06-04 04:34:57] 2025-06-03 16:34:56,969 [wrapper] Pilot exit status: 0
[2025-06-04 04:34:57] 2025-06-03 16:34:56,975 [wrapper] pandaids: 6677601348
[2025-06-04 04:34:57] 2025-06-03 16:34:56,989 [wrapper] cleanup supervisor_pilot 3496673 3480694
[2025-06-04 04:34:57] 2025-06-03 16:34:56,991 [wrapper] Test setup, not cleaning
[2025-06-04 04:34:57] 2025-06-03 16:34:56,992 [wrapper] apfmon messages muted
[2025-06-04 04:34:57] 2025-06-03 16:34:56,993 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:34:57] 2025-06-03 16:34:56,994 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:34:57]  *** Error codes and diagnostics ***
[2025-06-04 04:34:57]     "exeErrorCode": 0,
[2025-06-04 04:34:57]     "exeErrorDiag": "",
[2025-06-04 04:34:57]     "pilotErrorCode": 0,
[2025-06-04 04:34:57]     "pilotErrorDiag": "",
[2025-06-04 04:34:57]  *** Listing of results directory ***
[2025-06-04 04:34:57] total 392392
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:43 pilot3.tar.gz
[2025-06-04 04:34:57] -rwx------ 1 boinc boinc     37140 Jun  3 23:47 runpilot2-wrapper.sh
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:47 queuedata.json
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc       100 Jun  4 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:34:57] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 03:46 run_atlas
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc       105 Jun  4 03:46 job.xml
[2025-06-04 04:34:57] -rw-r--r-- 2 boinc boinc 214600425 Jun  4 03:46 EVNT.45006593._001249.pool.root.1
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc      9252 Jun  4 03:46 init_data.xml
[2025-06-04 04:34:57] drwxrwx--x 2 boinc boinc      4096 Jun  4 03:46 shared
[2025-06-04 04:34:57] -rw-r--r-- 2 boinc boinc    508875 Jun  4 03:46 input.tar.gz
[2025-06-04 04:34:57] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:46 start_atlas.sh
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc         0 Jun  4 03:46 boinc_lockfile
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc      2525 Jun  4 03:46 pandaJob.out
[2025-06-04 04:34:57] -rw------- 1 boinc boinc    983735 Jun  4 03:46 agis_schedconf.cvmfs.json
[2025-06-04 04:34:57] -rw------- 1 boinc boinc   1603667 Jun  4 03:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:34:57] drwx------ 4 boinc boinc      4096 Jun  4 03:46 pilot3
[2025-06-04 04:34:57] -rw------- 1 boinc boinc 182079275 Jun  4 04:33 HITS.45006595._031144.pool.root.1
[2025-06-04 04:34:57] -rw------- 1 boinc boinc        95 Jun  4 04:34 pilot_heartbeat.json
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc       529 Jun  4 04:34 boinc_task_state.xml
[2025-06-04 04:34:57] -rw------- 1 boinc boinc      1030 Jun  4 04:34 memory_monitor_summary.json
[2025-06-04 04:34:57] -rw------- 1 boinc boinc    344079 Jun  4 04:34 log.45006595._031144.job.log.tgz.1
[2025-06-04 04:34:57] -rw------- 1 boinc boinc      7677 Jun  4 04:34 heartbeat.json
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc      8192 Jun  4 04:34 boinc_mmap_file
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc        27 Jun  4 04:34 wrapper_checkpoint.txt
[2025-06-04 04:34:57] -rw------- 1 boinc boinc      4556 Jun  4 04:34 pilotlog.txt
[2025-06-04 04:34:57] -rw------- 1 boinc boinc    299729 Jun  4 04:34 log.45006595._031144.job.log.1
[2025-06-04 04:34:57] -rw------- 1 boinc boinc       357 Jun  4 04:34 output.list
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc       620 Jun  4 04:34 runtime_log
[2025-06-04 04:34:57] -rw------- 1 boinc boinc    665600 Jun  4 04:34 result.tar.gz
[2025-06-04 04:34:57] -rw------- 1 boinc boinc       645 Jun  4 04:34 zFELDmCIfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmarjKDm0BAj3n.diag
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc      8697 Jun  4 04:34 runtime_log.err
[2025-06-04 04:34:57] -rw-r--r-- 1 boinc boinc     22063 Jun  4 04:34 stderr.txt
[2025-06-04 04:34:57] HITS file was successfully produced:
[2025-06-04 04:34:57] -rw------- 1 boinc boinc 182079275 Jun  4 04:33 shared/HITS.pool.root.1
[2025-06-04 04:34:57]  *** Contents of shared directory: ***
[2025-06-04 04:34:57] total 388556
[2025-06-04 04:34:57] -rw-r--r-- 2 boinc boinc 214600425 Jun  4 03:46 ATLAS.root_0
[2025-06-04 04:34:57] -rw-r--r-- 2 boinc boinc    508875 Jun  4 03:46 input.tar.gz
[2025-06-04 04:34:57] -rw-r--r-- 2 boinc boinc     15093 Jun  4 03:46 start_atlas.sh
[2025-06-04 04:34:57] -rw------- 1 boinc boinc 182079275 Jun  4 04:33 HITS.pool.root.1
[2025-06-04 04:34:57] -rw------- 1 boinc boinc    665600 Jun  4 04:34 result.tar.gz
04:34:58 (3476968): run_atlas exited; CPU time 29840.973931
04:34:58 (3476968): called boinc_finish(0)

</stderr_txt>
]]>

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