Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:36:42 (3705): wrapper (7.7.26015): starting
10:36:42 (3705): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:36:42] Arguments: --nthreads 8
[2025-06-03 10:36:42] Threads: 8
[2025-06-03 10:36:42] Checking for CVMFS
[2025-06-03 10:36:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:36:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:36:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:36:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:36:43] 2.11.2.0 2860 34371 75028 146746 0 55 20137075 20275201 1 130560 0 11076156 99.976 6216086 7560 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 10:36:43] CVMFS is ok
[2025-06-03 10:36:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:36:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:36:43] Further information can be found at the LHC@home message board.
[2025-06-03 10:36:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:36:43] Checking for apptainer binary...
[2025-06-03 10:36:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:36:43] Running /usr/bin/apptainer --version
[2025-06-03 10:36:43] apptainer version 1.3.2-1.el7
[2025-06-03 10:36:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:36:45] c-204-39.aglt2.org
[2025-06-03 10:36:45] apptainer works
[2025-06-03 10:36:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:36:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:36:45] Starting ATLAS job with PandaID=6677601746
[2025-06-03 10:36:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:39:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:39:39] 2025-06-03 16:39:15,272 | INFO     | executing command: lscpu
[2025-06-03 12:39:39] 2025-06-03 16:39:15,289 | INFO     | number of running child processes to parent process 13962: 1
[2025-06-03 12:39:39] 2025-06-03 16:39:15,290 | INFO     | maximum number of monitored processes: 6
[2025-06-03 12:39:39] 2025-06-03 16:39:15,293 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:39:39] 2025-06-03 16:39:17,797 | INFO     | monitor loop #542: job 0:6677601746 is in state 'finished'
[2025-06-03 12:39:39] 2025-06-03 16:39:17,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,396 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 12:39:39] 2025-06-03 16:39:19,397 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677601746/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,398 | INFO     | extracted standard info from prmon json
[2025-06-03 12:39:39] 2025-06-03 16:39:19,398 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:39:39] 2025-06-03 16:39:19,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:39:39] 2025-06-03 16:39:19,399 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:39:39] 2025-06-03 16:39:19,399 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:39:39] 2025-06-03 16:39:19,402 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:39:39] 2025-06-03 16:39:19,402 | INFO     | sum of square deviations: 535786790.0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,403 | INFO     | sum of deviations: -678855030.9999971
[2025-06-03 12:39:39] 2025-06-03 16:39:19,403 | INFO     | mean x: 1748965083.5
[2025-06-03 12:39:39] 2025-06-03 16:39:19,403 | INFO     | mean y: 2528306.05
[2025-06-03 12:39:39] 2025-06-03 16:39:19,403 | INFO     | -- intersect: 2218510051.283594
[2025-06-03 12:39:39] 2025-06-03 16:39:19,403 | INFO     | intersect: 2218510051.283594
[2025-06-03 12:39:39] 2025-06-03 16:39:19,404 | INFO     | chi2: 1.645444058633645
[2025-06-03 12:39:39] 2025-06-03 16:39:19,404 | INFO     | sum of square deviations: 471562330.0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | sum of deviations: -250239568.00000483
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | mean x: 1748964931.0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | mean y: 2529324.3826086954
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | -- intersect: 930636174.6066252
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | intersect: 930636174.6066252
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | chi2: 1.6470983624342133
[2025-06-03 12:39:39] 2025-06-03 16:39:19,405 | INFO     | current chi2=1.6470983624342133 (change=-0.10053844078673899 %)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,406 | INFO     | right removable region: 114
[2025-06-03 12:39:39] 2025-06-03 16:39:19,406 | INFO     | sum of square deviations: 471562330.0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,406 | INFO     | sum of deviations: -18911399828.000004
[2025-06-03 12:39:39] 2025-06-03 16:39:19,406 | INFO     | mean x: 1748965236.0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,407 | INFO     | mean y: 2570770.2608695654
[2025-06-03 12:39:39] 2025-06-03 16:39:19,407 | INFO     | -- intersect: 70142568728.25803
[2025-06-03 12:39:39] 2025-06-03 16:39:19,407 | INFO     | intersect: 70142568728.25803
[2025-06-03 12:39:39] 2025-06-03 16:39:19,407 | INFO     | chi2: 0.13095150884589024
[2025-06-03 12:39:39] 2025-06-03 16:39:19,407 | INFO     | current chi2=0.13095150884589024 (change=92.04157028865322 %)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,408 | INFO     | sum of square deviations: 412686807.5
[2025-06-03 12:39:39] 2025-06-03 16:39:19,408 | INFO     | sum of deviations: -18682780429.0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,408 | INFO     | mean x: 1748965388.5
[2025-06-03 12:39:39] 2025-06-03 16:39:19,408 | INFO     | mean y: 2570035.7636363637
[2025-06-03 12:39:39] 2025-06-03 16:39:19,408 | INFO     | -- intersect: 79180134565.17056
[2025-06-03 12:39:39] 2025-06-03 16:39:19,409 | INFO     | intersect: 79180134565.17056
[2025-06-03 12:39:39] 2025-06-03 16:39:19,409 | INFO     | chi2: 0.10618095081977441
[2025-06-03 12:39:39] 2025-06-03 16:39:19,409 | INFO     | current chi2=0.10618095081977441 (change=18.915824830446944 %)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,409 | INFO     | left removable region: 20
[2025-06-03 12:39:39] 2025-06-03 16:39:19,409 | INFO     | sum of square deviations: 257521107.5
[2025-06-03 12:39:39] 2025-06-03 16:39:19,410 | INFO     | sum of deviations: -11549049419.000002
[2025-06-03 12:39:39] 2025-06-03 16:39:19,410 | INFO     | mean x: 1748965510.5
[2025-06-03 12:39:39] 2025-06-03 16:39:19,410 | INFO     | mean y: 2554234.659574468
[2025-06-03 12:39:39] 2025-06-03 16:39:19,410 | INFO     | -- intersect: 78438412595.86621
[2025-06-03 12:39:39] 2025-06-03 16:39:19,410 | INFO     | intersect: 78438412595.86621
[2025-06-03 12:39:39] 2025-06-03 16:39:19,410 | INFO     | chi2: 0.09541115762843089
[2025-06-03 12:39:39] 2025-06-03 16:39:19,411 | INFO     | -- intersect: 78438412595.86621
[2025-06-03 12:39:39] 2025-06-03 16:39:19,411 | INFO     | current memory leak: -44.85 B/s (using 94 data points, chi2=0.10)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,411 | INFO     | ..............................
[2025-06-03 12:39:39] 2025-06-03 16:39:19,411 | INFO     | . Timing measurements:
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . get job = 0 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . initial setup = 2 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . payload setup = 11 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . stage-in = 0 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . payload execution = 7299 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . stage-out = 0 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | . log creation = 0 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,412 | INFO     | ..............................
[2025-06-03 12:39:39] 2025-06-03 16:39:19,508 | INFO     | 
[2025-06-03 12:39:39] 2025-06-03 16:39:19,508 | INFO     | job summary report
[2025-06-03 12:39:39] 2025-06-03 16:39:19,508 | INFO     | --------------------------------------------------
[2025-06-03 12:39:39] 2025-06-03 16:39:19,508 | INFO     | PanDA job id: 6677601746
[2025-06-03 12:39:39] 2025-06-03 16:39:19,509 | INFO     | task id: 45006595
[2025-06-03 12:39:39] 2025-06-03 16:39:19,509 | INFO     | errors: (none)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:39:39] 2025-06-03 16:39:19,509 | INFO     | pilot state: finished 
[2025-06-03 12:39:39] 2025-06-03 16:39:19,509 | INFO     | transexitcode: 0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,509 | INFO     | exeerrorcode: 0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,510 | INFO     | exeerrordiag: 
[2025-06-03 12:39:39] 2025-06-03 16:39:19,510 | INFO     | exitcode: 0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,510 | INFO     | exitmsg: OK
[2025-06-03 12:39:39] 2025-06-03 16:39:19,510 | INFO     | cpuconsumptiontime: 51073 s
[2025-06-03 12:39:39] 2025-06-03 16:39:19,510 | INFO     | nevents: 400
[2025-06-03 12:39:39] 2025-06-03 16:39:19,510 | INFO     | neventsw: 0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,511 | INFO     | pid: 13962
[2025-06-03 12:39:39] 2025-06-03 16:39:19,511 | INFO     | pgrp: 13962
[2025-06-03 12:39:39] 2025-06-03 16:39:19,511 | INFO     | corecount: 8
[2025-06-03 12:39:39] 2025-06-03 16:39:19,511 | INFO     | event service: False
[2025-06-03 12:39:39] 2025-06-03 16:39:19,511 | INFO     | sizes: {0: 2405185, 6: 2405391, 11: 2405419, 7315: 2432576, 7317: 2441517, 7318: 2441573, 7323: 2441871}
[2025-06-03 12:39:39] 2025-06-03 16:39:19,511 | INFO     | --------------------------------------------------
[2025-06-03 12:39:39] 2025-06-03 16:39:19,512 | INFO     | 
[2025-06-03 12:39:39] 2025-06-03 16:39:19,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 12:39:39] 2025-06-03 16:39:19,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,539 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,539 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,539 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,539 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:39:39] 2025-06-03 16:39:19,540 | INFO     | job 6677601746 has completed (purged errors)
[2025-06-03 12:39:39] 2025-06-03 16:39:19,540 | INFO     | overall cleanup function is called
[2025-06-03 12:39:39] 2025-06-03 16:39:20,549 | INFO     | --- collectZombieJob: --- 10, [13962]
[2025-06-03 12:39:39] 2025-06-03 16:39:20,550 | INFO     | zombie collector waiting for pid 13962
[2025-06-03 12:39:39] 2025-06-03 16:39:20,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:39:39] 2025-06-03 16:39:20,550 | INFO     | collected zombie processes
[2025-06-03 12:39:39] 2025-06-03 16:39:20,550 | INFO     | will attempt to kill all subprocesses of pid=13962
[2025-06-03 12:39:39] 2025-06-03 16:39:20,655 | INFO     | process IDs to be killed: [13962] (in reverse order)
[2025-06-03 12:39:39] 2025-06-03 16:39:20,704 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:39:39] 2025-06-03 16:39:20,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:39:39] 2025-06-03 16:39:20,708 | INFO     | did not find any defunct processes belonging to 13962
[2025-06-03 12:39:39] 2025-06-03 16:39:20,711 | INFO     | did not find any defunct processes belonging to 13962
[2025-06-03 12:39:39] 2025-06-03 16:39:20,711 | INFO     | ready for new job
[2025-06-03 12:39:39] 2025-06-03 16:39:20,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:39:39] 2025-06-03 16:39:20,713 | INFO     | **************************************
[2025-06-03 12:39:39] 2025-06-03 16:39:20,713 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:39:39] 2025-06-03 16:39:20,713 | INFO     | **************************************
[2025-06-03 12:39:39] 2025-06-03 16:39:20,713 | INFO     | 
[2025-06-03 12:39:39] 2025-06-03 16:39:20,714 | INFO     | architecture information:
[2025-06-03 12:39:39] 2025-06-03 16:39:20,714 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:39:39] 2025-06-03 16:39:20,728 | INFO     | cat /etc/os-release:
[2025-06-03 12:39:39] NAME="CentOS Linux"
[2025-06-03 12:39:39] VERSION="7 (Core)"
[2025-06-03 12:39:39] ID="centos"
[2025-06-03 12:39:39] ID_LIKE="rhel fedora"
[2025-06-03 12:39:39] VERSION_ID="7"
[2025-06-03 12:39:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:39:39] ANSI_COLOR="0;31"
[2025-06-03 12:39:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:39:39] HOME_URL="https://www.centos.org/"
[2025-06-03 12:39:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:39:39] 
[2025-06-03 12:39:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:39:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:39:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:39:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:39:39] 
[2025-06-03 12:39:39] 2025-06-03 16:39:20,728 | INFO     | **************************************
[2025-06-03 12:39:39] 2025-06-03 16:39:21,232 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 12:39:39] 2025-06-03 16:39:21,245 | INFO     | sufficient remaining disk space (18600689664 B)
[2025-06-03 12:39:39] 2025-06-03 16:39:21,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:39:39] 2025-06-03 16:39:21,246 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:39:39] 2025-06-03 16:39:21,246 | INFO     | update_server=False
[2025-06-03 12:39:39] 2025-06-03 16:39:21,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:39:39] 2025-06-03 16:39:21,247 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:39:39] 2025-06-03 16:39:21,247 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:39:39] 2025-06-03 16:39:21,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:39:39] 2025-06-03 16:39:21,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:39:39] 2025-06-03 16:39:21,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:39:39] 2025-06-03 16:39:21,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:39:39] 2025-06-03 16:39:21,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:39:39] 2025-06-03 16:39:21,305 | INFO     | aborting loop
[2025-06-03 12:39:39] 2025-06-03 16:39:21,324 | INFO     | all job control threads have been joined
[2025-06-03 12:39:39] 2025-06-03 16:39:21,397 | INFO     | all payload control threads have been joined
[2025-06-03 12:39:39] 2025-06-03 16:39:21,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:39:39] 2025-06-03 16:39:22,252 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,252 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,295 | INFO     | all data control threads have been joined
[2025-06-03 12:39:39] 2025-06-03 16:39:22,306 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,329 | INFO     | [job] control thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,374 | INFO     | [job] validate thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,402 | INFO     | [payload] control thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,429 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:22,620 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:23,098 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:23,128 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:23,249 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:23,296 | INFO     | [data] control thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:23,479 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:25,278 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:31,972 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:39:39] 2025-06-03 16:39:32,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:39:39] 2025-06-03 16:39:34,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768575428416)>', '<ExcThread(monitor, started 139768117565184)>']
[2025-06-03 12:39:39] 2025-06-03 16:39:35,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:39:39] 2025-06-03 16:39:35,309 | INFO     | [monitor] control thread has ended
[2025-06-03 12:39:39] 2025-06-03 16:39:39,687 | INFO     | all workflow threads have been joined
[2025-06-03 12:39:39] 2025-06-03 16:39:39,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:39:39] 2025-06-03 16:39:39,688 | INFO     | traces error code: 0
[2025-06-03 12:39:39] 2025-06-03 16:39:39,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:39:39] 2025-06-03 16:39:39,794 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:39:39] 2025-06-03 16:39:39,797 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:39:39] 2025-06-03 16:39:39,799 [wrapper] pilotpid: 7461
[2025-06-03 12:39:39] 2025-06-03 16:39:39,802 [wrapper] Pilot exit status: 0
[2025-06-03 12:39:39] 2025-06-03 16:39:39,812 [wrapper] pandaids: 6677601746
[2025-06-03 12:39:39] 2025-06-03 16:39:39,845 [wrapper] cleanup supervisor_pilot  4401 7462
[2025-06-03 12:39:39] 2025-06-03 16:39:39,849 [wrapper] Test setup, not cleaning
[2025-06-03 12:39:39] 2025-06-03 16:39:39,854 [wrapper] apfmon messages muted
[2025-06-03 12:39:39] 2025-06-03 16:39:39,857 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:39:39] 2025-06-03 16:39:39,861 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:39:39]  *** Error codes and diagnostics ***
[2025-06-03 12:39:39]     "exeErrorCode": 0,
[2025-06-03 12:39:39]     "exeErrorDiag": "",
[2025-06-03 12:39:39]     "pilotErrorCode": 0,
[2025-06-03 12:39:39]     "pilotErrorDiag": "",
[2025-06-03 12:39:39]  *** Listing of results directory ***
[2025-06-03 12:39:39] total 396528
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 07:50 queuedata.json
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-03 12:39:39] -rwx------ 1 boincer umatlas     37140 Jun  3 07:52 runpilot2-wrapper.sh
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas       100 Jun  3 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:39:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 10:36 run_atlas
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas       105 Jun  3 10:36 job.xml
[2025-06-03 12:39:39] -rw-r--r-- 2 boincer umatlas 216925419 Jun  3 10:36 EVNT.45006593._001260.pool.root.1
[2025-06-03 12:39:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:36 start_atlas.sh
[2025-06-03 12:39:39] drwxrwx--x 2 boincer umatlas      4096 Jun  3 10:36 shared
[2025-06-03 12:39:39] -rw-r--r-- 2 boincer umatlas    508887 Jun  3 10:36 input.tar.gz
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas         0 Jun  3 10:36 boinc_lockfile
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas      2526 Jun  3 10:36 pandaJob.out
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas    982716 Jun  3 10:36 agis_schedconf.cvmfs.json
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas   1603667 Jun  3 10:36 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:39:39] drwx------ 4 boincer umatlas      4096 Jun  3 10:37 pilot3
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas      5904 Jun  3 12:29 init_data.xml
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas 183280638 Jun  3 12:38 HITS.45006595._031349.pool.root.1
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas       529 Jun  3 12:38 boinc_task_state.xml
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas        95 Jun  3 12:38 pilot_heartbeat.json
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas      1056 Jun  3 12:39 memory_monitor_summary.json
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas    334050 Jun  3 12:39 log.45006595._031349.job.log.tgz.1
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas      7757 Jun  3 12:39 heartbeat.json
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 12:39 boinc_mmap_file
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas        27 Jun  3 12:39 wrapper_checkpoint.txt
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas      4548 Jun  3 12:39 pilotlog.txt
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas    669098 Jun  3 12:39 log.45006595._031349.job.log.1
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas       357 Jun  3 12:39 output.list
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas       620 Jun  3 12:39 runtime_log
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas   1024000 Jun  3 12:39 result.tar.gz
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas       660 Jun  3 12:39 YbnLDmFNfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWtjKDmBSfkom.diag
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 12:39 runtime_log.err
[2025-06-03 12:39:39] -rw-r--r-- 1 boincer umatlas     21039 Jun  3 12:39 stderr.txt
[2025-06-03 12:39:39] HITS file was successfully produced:
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas 183280638 Jun  3 12:38 shared/HITS.pool.root.1
[2025-06-03 12:39:39]  *** Contents of shared directory: ***
[2025-06-03 12:39:39] total 392352
[2025-06-03 12:39:39] -rw-r--r-- 2 boincer umatlas 216925419 Jun  3 10:36 ATLAS.root_0
[2025-06-03 12:39:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:36 start_atlas.sh
[2025-06-03 12:39:39] -rw-r--r-- 2 boincer umatlas    508887 Jun  3 10:36 input.tar.gz
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas 183280638 Jun  3 12:38 HITS.pool.root.1
[2025-06-03 12:39:39] -rw------- 1 boincer umatlas   1024000 Jun  3 12:39 result.tar.gz
12:39:41 (3705): run_atlas exited; CPU time 50979.896481
12:39:41 (3705): called boinc_finish(0)

</stderr_txt>
]]>

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