Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:11:45 (2773030): wrapper (7.7.26015): starting
10:11:45 (2773030): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 10:11:45] Arguments: --nthreads 4
[2025-06-05 10:11:45] Threads: 4
[2025-06-05 10:11:45] Checking for CVMFS
[2025-06-05 10:11:45] No cvmfs_config command found, will try listing directly
[2025-06-05 10:11:45] CVMFS is ok
[2025-06-05 10:11:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:11:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:11:45] Further information can be found at the LHC@home message board.
[2025-06-05 10:11:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:11:45] Checking for apptainer binary...
[2025-06-05 10:11:45] which: no apptainer in ((null))
[2025-06-05 10:11:45] apptainer is not installed, using version from CVMFS
[2025-06-05 10:11:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:11:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-05 10:11:45] apptainer works
[2025-06-05 10:11:45] Set ATHENA_PROC_NUMBER=4
[2025-06-05 10:11:45] Set ATHENA_CORE_NUMBER=4
[2025-06-05 10:11:45] Starting ATLAS job with PandaID=6677601408
[2025-06-05 10:11:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:45:34]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:45:34] 2025-06-05 10:43:07,568 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 12:45:34] 2025-06-05 10:43:07,569 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677601408/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,569 | INFO     | extracted standard info from prmon json
[2025-06-05 12:45:34] 2025-06-05 10:43:07,570 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:45:34] 2025-06-05 10:43:07,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:45:34] 2025-06-05 10:43:07,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:45:34] 2025-06-05 10:43:07,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:45:34] 2025-06-05 10:43:07,574 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:45:34] 2025-06-05 10:43:07,574 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,575 | INFO     | sum of deviations: 10768331463.999989
[2025-06-05 12:45:34] 2025-06-05 10:43:07,576 | INFO     | mean x: 1749115656.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,576 | INFO     | mean y: 2294541.355704698
[2025-06-05 12:45:34] 2025-06-05 10:43:07,576 | INFO     | -- intersect: -18360943987.692204
[2025-06-05 12:45:34] 2025-06-05 10:43:07,576 | INFO     | intersect: -18360943987.692204
[2025-06-05 12:45:34] 2025-06-05 10:43:07,576 | INFO     | chi2: 2.263620577185212
[2025-06-05 12:45:34] 2025-06-05 10:43:07,576 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,577 | INFO     | sum of deviations: 18638764414.99999
[2025-06-05 12:45:34] 2025-06-05 10:43:07,577 | INFO     | mean x: 1749115503.5
[2025-06-05 12:45:34] 2025-06-05 10:43:07,577 | INFO     | mean y: 2306208.9583333335
[2025-06-05 12:45:34] 2025-06-05 10:43:07,578 | INFO     | -- intersect: -35209690496.502556
[2025-06-05 12:45:34] 2025-06-05 10:43:07,578 | INFO     | intersect: -35209690496.502556
[2025-06-05 12:45:34] 2025-06-05 10:43:07,578 | INFO     | chi2: 1.6043040303720226
[2025-06-05 12:45:34] 2025-06-05 10:43:07,578 | INFO     | current chi2=1.6043040303720226 (change=29.126636922210807 %)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,578 | INFO     | sum of square deviations: 832722590.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,579 | INFO     | sum of deviations: 17806532813.99998
[2025-06-05 12:45:34] 2025-06-05 10:43:07,579 | INFO     | mean x: 1749115351.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,579 | INFO     | mean y: 2304845.7410071944
[2025-06-05 12:45:34] 2025-06-05 10:43:07,579 | INFO     | -- intersect: -37399922819.36004
[2025-06-05 12:45:34] 2025-06-05 10:43:07,579 | INFO     | intersect: -37399922819.36004
[2025-06-05 12:45:34] 2025-06-05 10:43:07,580 | INFO     | chi2: 1.6064395439999903
[2025-06-05 12:45:34] 2025-06-05 10:43:07,580 | INFO     | current chi2=1.6064395439999903 (change=-0.13311152920762195 %)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,580 | INFO     | right removable region: 138
[2025-06-05 12:45:34] 2025-06-05 10:43:07,580 | INFO     | sum of square deviations: 925859220.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,581 | INFO     | sum of deviations: -11922871449.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,581 | INFO     | mean x: 1749115808.5
[2025-06-05 12:45:34] 2025-06-05 10:43:07,581 | INFO     | mean y: 2328710.5
[2025-06-05 12:45:34] 2025-06-05 10:43:07,581 | INFO     | -- intersect: 22526792995.85777
[2025-06-05 12:45:34] 2025-06-05 10:43:07,581 | INFO     | intersect: 22526792995.85777
[2025-06-05 12:45:34] 2025-06-05 10:43:07,582 | INFO     | chi2: 0.6943357841868808
[2025-06-05 12:45:34] 2025-06-05 10:43:07,582 | INFO     | current chi2=0.6943357841868808 (change=69.32631770602298 %)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,582 | INFO     | sum of square deviations: 832722590.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,583 | INFO     | sum of deviations: -11250889227.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,583 | INFO     | mean x: 1749115961.0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,583 | INFO     | mean y: 2327600.035971223
[2025-06-05 12:45:34] 2025-06-05 10:43:07,583 | INFO     | -- intersect: 23634579395.185005
[2025-06-05 12:45:34] 2025-06-05 10:43:07,583 | INFO     | intersect: 23634579395.185005
[2025-06-05 12:45:34] 2025-06-05 10:43:07,584 | INFO     | chi2: 0.6945950429712081
[2025-06-05 12:45:34] 2025-06-05 10:43:07,584 | INFO     | current chi2=0.6945950429712081 (change=-0.03733910742205534 %)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,584 | INFO     | left removable region: 20
[2025-06-05 12:45:34] 2025-06-05 10:43:07,584 | INFO     | sum of square deviations: 509440249.5
[2025-06-05 12:45:34] 2025-06-05 10:43:07,585 | INFO     | sum of deviations: -1108594388.5
[2025-06-05 12:45:34] 2025-06-05 10:43:07,585 | INFO     | mean x: 1749115930.5
[2025-06-05 12:45:34] 2025-06-05 10:43:07,585 | INFO     | mean y: 2336484.3983050846
[2025-06-05 12:45:34] 2025-06-05 10:43:07,585 | INFO     | -- intersect: 3808592678.9007688
[2025-06-05 12:45:34] 2025-06-05 10:43:07,585 | INFO     | intersect: 3808592678.9007688
[2025-06-05 12:45:34] 2025-06-05 10:43:07,585 | INFO     | chi2: 0.004681276496540855
[2025-06-05 12:45:34] 2025-06-05 10:43:07,586 | INFO     | -- intersect: 3808592678.9007688
[2025-06-05 12:45:34] 2025-06-05 10:43:07,586 | INFO     | current memory leak: -2.18 B/s (using 118 data points, chi2=0.00)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,586 | INFO     | ..............................
[2025-06-05 12:45:34] 2025-06-05 10:43:07,586 | INFO     | . Timing measurements:
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . get job = 0 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . initial setup = 1 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . payload setup = 7 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . stage-in = 0 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . payload execution = 9039 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . stage-out = 0 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | . log creation = 0 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,587 | INFO     | ..............................
[2025-06-05 12:45:34] 2025-06-05 10:43:07,695 | INFO     | 
[2025-06-05 12:45:34] 2025-06-05 10:43:07,695 | INFO     | job summary report
[2025-06-05 12:45:34] 2025-06-05 10:43:07,695 | INFO     | --------------------------------------------------
[2025-06-05 12:45:34] 2025-06-05 10:43:07,695 | INFO     | PanDA job id: 6677601408
[2025-06-05 12:45:34] 2025-06-05 10:43:07,695 | INFO     | task id: 45006595
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | errors: (none)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | pilot state: finished 
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | transexitcode: 0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | exeerrorcode: 0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | exeerrordiag: 
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | exitcode: 0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | exitmsg: OK
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | cpuconsumptiontime: 34517 s
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | nevents: 400
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | neventsw: 0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | pid: 2784760
[2025-06-05 12:45:34] 2025-06-05 10:43:07,696 | INFO     | pgrp: 2784760
[2025-06-05 12:45:34] 2025-06-05 10:43:07,697 | INFO     | corecount: 4
[2025-06-05 12:45:34] 2025-06-05 10:43:07,697 | INFO     | event service: False
[2025-06-05 12:45:34] 2025-06-05 10:43:07,697 | INFO     | sizes: {0: 2397353, 1: 2397381, 5: 2397587, 11: 2397643, 9050: 2425652, 9052: 2434799, 9057: 2434913}
[2025-06-05 12:45:34] 2025-06-05 10:43:07,697 | INFO     | --------------------------------------------------
[2025-06-05 12:45:34] 2025-06-05 10:43:07,697 | INFO     | 
[2025-06-05 12:45:34] 2025-06-05 10:43:07,697 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:45:34] 2025-06-05 10:43:07,722 | INFO     | job 6677601408 has completed (purged errors)
[2025-06-05 12:45:34] 2025-06-05 10:43:07,722 | INFO     | overall cleanup function is called
[2025-06-05 12:45:34] 2025-06-05 10:43:08,730 | INFO     | --- collectZombieJob: --- 10, [2784760]
[2025-06-05 12:45:34] 2025-06-05 10:43:08,730 | INFO     | zombie collector waiting for pid 2784760
[2025-06-05 12:45:34] 2025-06-05 10:43:08,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:45:34] 2025-06-05 10:43:08,731 | INFO     | collected zombie processes
[2025-06-05 12:45:34] 2025-06-05 10:43:08,731 | INFO     | will attempt to kill all subprocesses of pid=2784760
[2025-06-05 12:45:34] 2025-06-05 10:43:09,127 | INFO     | process IDs to be killed: [2784760] (in reverse order)
[2025-06-05 12:45:34] 2025-06-05 10:43:09,236 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:45:34] 2025-06-05 10:43:09,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:45:34] 2025-06-05 10:43:09,249 | INFO     | did not find any defunct processes belonging to 2784760
[2025-06-05 12:45:34] 2025-06-05 10:43:09,263 | INFO     | did not find any defunct processes belonging to 2784760
[2025-06-05 12:45:34] 2025-06-05 10:43:09,263 | INFO     | ready for new job
[2025-06-05 12:45:34] 2025-06-05 10:43:09,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:45:34] 2025-06-05 10:43:09,265 | INFO     | **************************************
[2025-06-05 12:45:34] 2025-06-05 10:43:09,266 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:45:34] 2025-06-05 10:43:09,266 | INFO     | **************************************
[2025-06-05 12:45:34] 2025-06-05 10:43:09,266 | INFO     | 
[2025-06-05 12:45:34] 2025-06-05 10:43:09,271 | INFO     | architecture information:
[2025-06-05 12:45:34] 2025-06-05 10:43:09,271 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:45:34] 2025-06-05 10:43:09,286 | INFO     | cat /etc/os-release:
[2025-06-05 12:45:34] NAME="CentOS Linux"
[2025-06-05 12:45:34] VERSION="7 (Core)"
[2025-06-05 12:45:34] ID="centos"
[2025-06-05 12:45:34] ID_LIKE="rhel fedora"
[2025-06-05 12:45:34] VERSION_ID="7"
[2025-06-05 12:45:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:45:34] ANSI_COLOR="0;31"
[2025-06-05 12:45:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:45:34] HOME_URL="https://www.centos.org/"
[2025-06-05 12:45:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:45:34] 
[2025-06-05 12:45:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:45:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:45:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:45:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:45:34] 
[2025-06-05 12:45:34] 2025-06-05 10:43:09,287 | INFO     | **************************************
[2025-06-05 12:45:34] 2025-06-05 10:43:09,790 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-05 12:45:34] 2025-06-05 10:43:09,807 | INFO     | sufficient remaining disk space (660903821312 B)
[2025-06-05 12:45:34] 2025-06-05 10:43:09,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:45:34] 2025-06-05 10:43:09,807 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:45:34] 2025-06-05 10:43:09,807 | INFO     | update_server=False
[2025-06-05 12:45:34] 2025-06-05 10:43:09,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:45:34] 2025-06-05 10:43:09,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:45:34] 2025-06-05 10:43:09,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:45:34] 2025-06-05 10:43:09,808 | INFO     | aborting loop
[2025-06-05 12:45:34] 2025-06-05 10:43:09,928 | INFO     | all data control threads have been joined
[2025-06-05 12:45:34] 2025-06-05 10:43:10,314 | INFO     | all payload control threads have been joined
[2025-06-05 12:45:34] 2025-06-05 10:43:10,444 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:45:34] 2025-06-05 10:43:10,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:45:34] 2025-06-05 10:43:10,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:45:34] 2025-06-05 10:43:10,813 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:10,814 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:10,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:45:34] 2025-06-05 10:43:10,932 | INFO     | [data] control thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:10,984 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,045 | INFO     | [job] validate thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,164 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,203 | INFO     | all job control threads have been joined
[2025-06-05 12:45:34] 2025-06-05 10:43:11,311 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,315 | INFO     | [payload] control thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,436 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,437 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:11,708 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:12,208 | INFO     | [job] control thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:12,289 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:12,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:45:34] 2025-06-05 10:43:12,870 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:13,710 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:13,813 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:45:34] 2025-06-05 10:43:15,351 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22825510467392)>', '<ExcThread(monitor, started 22824798385920)>']
[2025-06-05 12:45:34] 2025-06-05 10:43:15,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:45:34] 2025-06-05 10:43:15,468 | INFO     | [monitor] control thread has ended
[2025-06-05 12:45:34] 2025-06-05 10:43:20,376 | INFO     | all workflow threads have been joined
[2025-06-05 12:45:34] 2025-06-05 10:43:20,377 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:45:34] 2025-06-05 10:43:20,377 | INFO     | traces error code: 0
[2025-06-05 12:45:34] 2025-06-05 10:43:20,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:45:34] 2025-06-05 10:43:20,532 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:45:34] 2025-06-05 10:43:20,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:45:34] 2025-06-05 10:43:20,537 [wrapper] pilotpid: 2777448
[2025-06-05 12:45:34] 2025-06-05 10:43:20,540 [wrapper] Pilot exit status: 0
[2025-06-05 12:45:34] 2025-06-05 10:43:20,551 [wrapper] pandaids: 6677601408
[2025-06-05 12:45:34] 2025-06-05 10:43:20,627 [wrapper] cleanup supervisor_pilot 3046522 2777449
[2025-06-05 12:45:34] 2025-06-05 10:43:20,631 [wrapper] Test setup, not cleaning
[2025-06-05 12:45:34] 2025-06-05 10:43:20,633 [wrapper] apfmon messages muted
[2025-06-05 12:45:34] 2025-06-05 10:43:20,636 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:45:34] 2025-06-05 10:43:20,639 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:45:34]  *** Error codes and diagnostics ***
[2025-06-05 12:45:34]     "exeErrorCode": 0,
[2025-06-05 12:45:34]     "exeErrorDiag": "",
[2025-06-05 12:45:34]     "pilotErrorCode": 0,
[2025-06-05 12:45:34]     "pilotErrorDiag": "",
[2025-06-05 12:45:34]  *** Listing of results directory ***
[2025-06-05 12:45:34] total 390384
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc      5111 Jun  3 13:50 queuedata.json
[2025-06-05 12:45:34] -rwx------ 1 boinc boinc     37140 Jun  3 13:50 runpilot2-wrapper.sh
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc    495897 Jun  3 13:50 pilot3.tar.gz
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:45:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:11 run_atlas
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:11 job.xml
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc      6632 Jun  5 10:11 init_data.xml
[2025-06-05 12:45:34] -rw-r--r-- 2 boinc boinc 213716270 Jun  5 10:11 EVNT.45006593._001251.pool.root.1
[2025-06-05 12:45:34] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:11 start_atlas.sh
[2025-06-05 12:45:34] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:11 shared
[2025-06-05 12:45:34] -rw-r--r-- 2 boinc boinc    508876 Jun  5 10:11 input.tar.gz
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:11 boinc_lockfile
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc      2525 Jun  5 10:11 pandaJob.out
[2025-06-05 12:45:34] -rw------- 1 boinc boinc    983087 Jun  5 10:11 agis_schedconf.cvmfs.json
[2025-06-05 12:45:34] -rw------- 1 boinc boinc   1598969 Jun  5 10:11 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:45:34] drwx------ 4 boinc boinc      4096 Jun  5 10:11 pilot3
[2025-06-05 12:45:34] -rw------- 1 boinc boinc        95 Jun  5 12:42 pilot_heartbeat.json
[2025-06-05 12:45:34] -rw------- 1 boinc boinc 179883680 Jun  5 12:42 HITS.45006595._031204.pool.root.1
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc       528 Jun  5 12:42 boinc_task_state.xml
[2025-06-05 12:45:34] -rw------- 1 boinc boinc      1035 Jun  5 12:42 memory_monitor_summary.json
[2025-06-05 12:45:34] -rw------- 1 boinc boinc    301291 Jun  5 12:43 log.45006595._031204.job.log.tgz.1
[2025-06-05 12:45:34] -rw------- 1 boinc boinc      7723 Jun  5 12:43 heartbeat.json
[2025-06-05 12:45:34] -rw------- 1 boinc boinc      4363 Jun  5 12:43 pilotlog.txt
[2025-06-05 12:45:34] -rw------- 1 boinc boinc    862013 Jun  5 12:43 log.45006595._031204.job.log.1
[2025-06-05 12:45:34] -rw------- 1 boinc boinc       357 Jun  5 12:43 output.list
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc       620 Jun  5 12:43 runtime_log
[2025-06-05 12:45:34] -rw------- 1 boinc boinc   1177600 Jun  5 12:43 result.tar.gz
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc      9025 Jun  5 12:43 runtime_log.err
[2025-06-05 12:45:34] -rw------- 1 boinc boinc       662 Jun  5 12:43 8yFODmSLfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTsjKDmAYKw0n.diag
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc        27 Jun  5 12:45 wrapper_checkpoint.txt
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc      8192 Jun  5 12:45 boinc_mmap_file
[2025-06-05 12:45:34] -rw-r--r-- 1 boinc boinc     20579 Jun  5 12:45 stderr.txt
[2025-06-05 12:45:34] HITS file was successfully produced:
[2025-06-05 12:45:34] -rw------- 1 boinc boinc 179883680 Jun  5 12:42 shared/HITS.pool.root.1
[2025-06-05 12:45:34]  *** Contents of shared directory: ***
[2025-06-05 12:45:34] total 386052
[2025-06-05 12:45:34] -rw-r--r-- 2 boinc boinc 213716270 Jun  5 10:11 ATLAS.root_0
[2025-06-05 12:45:34] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:11 start_atlas.sh
[2025-06-05 12:45:34] -rw-r--r-- 2 boinc boinc    508876 Jun  5 10:11 input.tar.gz
[2025-06-05 12:45:34] -rw------- 1 boinc boinc 179883680 Jun  5 12:42 HITS.pool.root.1
[2025-06-05 12:45:34] -rw------- 1 boinc boinc   1177600 Jun  5 12:43 result.tar.gz
12:45:36 (2773030): run_atlas exited; CPU time 34897.699467
12:45:36 (2773030): called boinc_finish(0)

</stderr_txt>
]]>

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