Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:35:14 (2088): wrapper (7.7.26015): starting
10:35:14 (2088): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 10:35:14] Arguments: --nthreads 10
[2025-06-03 10:35:14] Threads: 10
[2025-06-03 10:35:14] Checking for CVMFS
[2025-06-03 10:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:35:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:35:14] 2.11.2.0 13662 107379 200940 146746 3 62 9709535 18432000 1535 130560 0 486660687 99.083 986863555 35510 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 10:35:14] CVMFS is ok
[2025-06-03 10:35:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:35:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:35:14] Further information can be found at the LHC@home message board.
[2025-06-03 10:35:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:35:14] Checking for apptainer binary...
[2025-06-03 10:35:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:35:14] Running /usr/bin/apptainer --version
[2025-06-03 10:35:14] apptainer version 1.3.2-1.el7
[2025-06-03 10:35:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:35:15] c-210-25.aglt2.org
[2025-06-03 10:35:15] apptainer works
[2025-06-03 10:35:15] Set ATHENA_PROC_NUMBER=10
[2025-06-03 10:35:15] Set ATHENA_CORE_NUMBER=10
[2025-06-03 10:35:15] Starting ATLAS job with PandaID=6677616817
[2025-06-03 10:35:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:47:56]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:47:56]  guid=3b701add-0d9f-47fd-b60a-6eb6c3a15444
[2025-06-03 11:47:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 11:47:56]  is_altstaged=None
[2025-06-03 11:47:56]  is_tar=False
[2025-06-03 11:47:56]  lfn=log.45006595._031648.job.log.tgz.1
[2025-06-03 11:47:56]  mtime=0
[2025-06-03 11:47:56]  protocol_id=None
[2025-06-03 11:47:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:47:56]  replicas=None
[2025-06-03 11:47:56]  scope=mc23_13p6TeV
[2025-06-03 11:47:56]  status=None
[2025-06-03 11:47:56]  status_code=0
[2025-06-03 11:47:56]  storage_token=
[2025-06-03 11:47:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677616817/log.45006595._031648.job.log.tgz.1
[2025-06-03 11:47:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/06/log.45006595._031648.job.log.tgz.1
[2025-06-03 11:47:56]  workdir=None
[2025-06-03 11:47:56] ]
[2025-06-03 11:47:56] 2025-06-03 15:47:29,464 | INFO     | transferring file log.45006595._031648.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677616817/log.45006595._031648.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:47:56] 2025-06-03 15:47:29,464 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677616817/log.45006595._031648.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._031648.job
[2025-06-03 11:47:56] 2025-06-03 15:47:29,483 | INFO     | adding to output.list: log.45006595._031648.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/06/log.45006595._031648.job.log.tg
[2025-06-03 11:47:56] 2025-06-03 15:47:29,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:47:56] 2025-06-03 15:47:29,484 | INFO     | summary of transferred files:
[2025-06-03 11:47:56] 2025-06-03 15:47:29,484 | INFO     |  -- lfn=log.45006595._031648.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:47:56] 2025-06-03 15:47:29,484 | INFO     | stage-out finished correctly
[2025-06-03 11:47:56] 2025-06-03 15:47:29,930 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:47:56] 2025-06-03 15:47:31,787 | INFO     | monitor loop #329: job 0:6677616817 is in state 'finished'
[2025-06-03 11:47:56] 2025-06-03 15:47:31,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:47:56] 2025-06-03 15:47:32,837 | INFO     | job 6677616817 has state=finished
[2025-06-03 11:47:56] 2025-06-03 15:47:32,837 | INFO     | preparing for final server update for job 6677616817 in state='finished'
[2025-06-03 11:47:56] 2025-06-03 15:47:32,838 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:47:56] 2025-06-03 15:47:32,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:47:56] 2025-06-03 15:47:32,838 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:47:56] 2025-06-03 15:47:32,838 | INFO     | job 6677616817 has finished - writing final server update
[2025-06-03 11:47:56] 2025-06-03 15:47:32,839 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:47:56] 2025-06-03 15:47:32,842 | INFO     | executing command: lscpu
[2025-06-03 11:47:56] 2025-06-03 15:47:32,881 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:47:56] 2025-06-03 15:47:34,290 | INFO     | monitor loop #330: job 0:6677616817 is in state 'finished'
[2025-06-03 11:47:56] 2025-06-03 15:47:34,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:47:56] 2025-06-03 15:47:36,210 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 11:47:56] 2025-06-03 15:47:36,211 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677616817/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:47:56] 2025-06-03 15:47:36,212 | INFO     | extracted standard info from prmon json
[2025-06-03 11:47:56] 2025-06-03 15:47:36,212 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:47:56] 2025-06-03 15:47:36,212 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:47:56] 2025-06-03 15:47:36,212 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:47:56] 2025-06-03 15:47:36,212 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:47:56] 2025-06-03 15:47:36,214 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:47:56] 2025-06-03 15:47:36,215 | INFO     | sum of square deviations: 81266640.0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,215 | INFO     | sum of deviations: -4495158320.0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,215 | INFO     | mean x: 1748963577.5
[2025-06-03 11:47:56] 2025-06-03 15:47:36,215 | INFO     | mean y: 2667633.8125
[2025-06-03 11:47:56] 2025-06-03 15:47:36,215 | INFO     | -- intersect: 96744309428.97087
[2025-06-03 11:47:56] 2025-06-03 15:47:36,215 | INFO     | intersect: 96744309428.97087
[2025-06-03 11:47:56] 2025-06-03 15:47:36,216 | INFO     | chi2: 0.014250386052408847
[2025-06-03 11:47:56] 2025-06-03 15:47:36,216 | INFO     | -- intersect: 96744309428.97087
[2025-06-03 11:47:56] 2025-06-03 15:47:36,216 | INFO     | current memory leak: -55.31 B/s (using 64 data points, chi2=0.01)
[2025-06-03 11:47:56] 2025-06-03 15:47:36,216 | INFO     | ..............................
[2025-06-03 11:47:56] 2025-06-03 15:47:36,216 | INFO     | . Timing measurements:
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . get job = 0 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . initial setup = 2 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . payload setup = 6 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . stage-in = 0 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . payload execution = 4298 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . stage-out = 0 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | . log creation = 0 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,217 | INFO     | ..............................
[2025-06-03 11:47:56] 2025-06-03 15:47:36,293 | INFO     | 
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | job summary report
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | --------------------------------------------------
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | PanDA job id: 6677616817
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | task id: 45006595
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | errors: (none)
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:47:56] 2025-06-03 15:47:36,294 | INFO     | pilot state: finished 
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | transexitcode: 0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | exeerrorcode: 0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | exeerrordiag: 
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | exitcode: 0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | exitmsg: OK
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | cpuconsumptiontime: 37897 s
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | nevents: 400
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | neventsw: 0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,295 | INFO     | pid: 12830
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | pgrp: 12830
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | corecount: 10
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | event service: False
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4308: 2431473, 4309: 2440414, 4310: 2440470, 4316: 2440768}
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | --------------------------------------------------
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | 
[2025-06-03 11:47:56] 2025-06-03 15:47:36,296 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 11:47:56] 2025-06-03 15:47:36,317 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:47:56] 2025-06-03 15:47:36,320 | INFO     | job 6677616817 has completed (purged errors)
[2025-06-03 11:47:56] 2025-06-03 15:47:36,320 | INFO     | overall cleanup function is called
[2025-06-03 11:47:56] 2025-06-03 15:47:37,328 | INFO     | --- collectZombieJob: --- 10, [12830]
[2025-06-03 11:47:56] 2025-06-03 15:47:37,328 | INFO     | zombie collector waiting for pid 12830
[2025-06-03 11:47:56] 2025-06-03 15:47:37,328 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:47:56] 2025-06-03 15:47:37,329 | INFO     | collected zombie processes
[2025-06-03 11:47:56] 2025-06-03 15:47:37,329 | INFO     | will attempt to kill all subprocesses of pid=12830
[2025-06-03 11:47:56] 2025-06-03 15:47:37,462 | INFO     | process IDs to be killed: [12830] (in reverse order)
[2025-06-03 11:47:56] 2025-06-03 15:47:37,512 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:47:56] 2025-06-03 15:47:37,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:47:56] 2025-06-03 15:47:37,518 | INFO     | did not find any defunct processes belonging to 12830
[2025-06-03 11:47:56] 2025-06-03 15:47:37,522 | INFO     | did not find any defunct processes belonging to 12830
[2025-06-03 11:47:56] 2025-06-03 15:47:37,522 | INFO     | ready for new job
[2025-06-03 11:47:56] 2025-06-03 15:47:37,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:47:56] 2025-06-03 15:47:37,524 | INFO     | **************************************
[2025-06-03 11:47:56] 2025-06-03 15:47:37,524 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:47:56] 2025-06-03 15:47:37,524 | INFO     | **************************************
[2025-06-03 11:47:56] 2025-06-03 15:47:37,524 | INFO     | 
[2025-06-03 11:47:56] 2025-06-03 15:47:37,527 | INFO     | architecture information:
[2025-06-03 11:47:56] 2025-06-03 15:47:37,527 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:47:56] 2025-06-03 15:47:37,539 | INFO     | cat /etc/os-release:
[2025-06-03 11:47:56] NAME="CentOS Linux"
[2025-06-03 11:47:56] VERSION="7 (Core)"
[2025-06-03 11:47:56] ID="centos"
[2025-06-03 11:47:56] ID_LIKE="rhel fedora"
[2025-06-03 11:47:56] VERSION_ID="7"
[2025-06-03 11:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:47:56] ANSI_COLOR="0;31"
[2025-06-03 11:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:47:56] HOME_URL="https://www.centos.org/"
[2025-06-03 11:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:47:56] 
[2025-06-03 11:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:47:56] 
[2025-06-03 11:47:56] 2025-06-03 15:47:37,540 | INFO     | **************************************
[2025-06-03 11:47:56] 2025-06-03 15:47:38,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 11:47:56] 2025-06-03 15:47:38,062 | INFO     | sufficient remaining disk space (57031000064 B)
[2025-06-03 11:47:56] 2025-06-03 15:47:38,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:47:56] 2025-06-03 15:47:38,062 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:47:56] 2025-06-03 15:47:38,062 | INFO     | update_server=False
[2025-06-03 11:47:56] 2025-06-03 15:47:38,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:47:56] 2025-06-03 15:47:38,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:47:56] 2025-06-03 15:47:38,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:47:56] 2025-06-03 15:47:38,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:47:56] 2025-06-03 15:47:38,064 | INFO     | aborting loop
[2025-06-03 11:47:56] 2025-06-03 15:47:38,627 | INFO     | all data control threads have been joined
[2025-06-03 11:47:56] 2025-06-03 15:47:38,650 | INFO     | PID=6361 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 11:47:56] 2025-06-03 15:47:38,650 | INFO     | .. there are 4 such processes running
[2025-06-03 11:47:56] 2025-06-03 15:47:38,650 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:47:56] 2025-06-03 15:47:38,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:47:56] 2025-06-03 15:47:38,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:47:56] 2025-06-03 15:47:38,688 | INFO     | all payload control threads have been joined
[2025-06-03 11:47:56] 2025-06-03 15:47:38,898 | INFO     | all job control threads have been joined
[2025-06-03 11:47:56] 2025-06-03 15:47:39,068 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,069 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,070 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,267 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,325 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,632 | INFO     | [data] control thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,694 | INFO     | [payload] control thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,718 | INFO     | [job] validate thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,904 | INFO     | [job] control thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:39,981 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:40,061 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:40,069 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:40,146 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:40,374 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:40,524 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:47:56] 2025-06-03 15:47:44,530 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:49,068 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:47:56] 2025-06-03 15:47:50,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:47:56] 2025-06-03 15:47:51,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749338810176)>', '<ExcThread(monitor, started 139748765067008)>']
[2025-06-03 11:47:56] 2025-06-03 15:47:51,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:47:56] 2025-06-03 15:47:51,713 | INFO     | [monitor] control thread has ended
[2025-06-03 11:47:56] 2025-06-03 15:47:56,582 | INFO     | all workflow threads have been joined
[2025-06-03 11:47:56] 2025-06-03 15:47:56,583 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:47:56] 2025-06-03 15:47:56,583 | INFO     | traces error code: 0
[2025-06-03 11:47:56] 2025-06-03 15:47:56,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:47:56] 2025-06-03 15:47:56,687 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:47:56] 2025-06-03 15:47:56,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:47:56] 2025-06-03 15:47:56,693 [wrapper] pilotpid: 6361
[2025-06-03 11:47:56] 2025-06-03 15:47:56,696 [wrapper] Pilot exit status: 0
[2025-06-03 11:47:56] 2025-06-03 15:47:56,706 [wrapper] pandaids: 6677616817
[2025-06-03 11:47:56] 2025-06-03 15:47:56,743 [wrapper] cleanup supervisor_pilot 27631 6362
[2025-06-03 11:47:56] 2025-06-03 15:47:56,745 [wrapper] Test setup, not cleaning
[2025-06-03 11:47:56] 2025-06-03 15:47:56,748 [wrapper] apfmon messages muted
[2025-06-03 11:47:56] 2025-06-03 15:47:56,750 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:47:56] 2025-06-03 15:47:56,752 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:47:56]  *** Error codes and diagnostics ***
[2025-06-03 11:47:56]     "exeErrorCode": 0,
[2025-06-03 11:47:56]     "exeErrorDiag": "",
[2025-06-03 11:47:56]     "pilotErrorCode": 0,
[2025-06-03 11:47:56]     "pilotErrorDiag": "",
[2025-06-03 11:47:56]  *** Listing of results directory ***
[2025-06-03 11:47:56] total 392488
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-03 11:47:56] -rwx------ 1 boincer umatlas     37140 Jun  3 08:04 runpilot2-wrapper.sh
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 08:04 queuedata.json
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas       100 Jun  3 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:47:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 10:35 run_atlas
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas       105 Jun  3 10:35 job.xml
[2025-06-03 11:47:56] -rw-r--r-- 2 boincer umatlas 216273334 Jun  3 10:35 EVNT.45006593._001274.pool.root.1
[2025-06-03 11:47:56] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 10:35 input.tar.gz
[2025-06-03 11:47:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:35 start_atlas.sh
[2025-06-03 11:47:56] drwxrwx--x 2 boincer umatlas      4096 Jun  3 10:35 shared
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas         0 Jun  3 10:35 boinc_lockfile
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 10:35 pandaJob.out
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas    982716 Jun  3 10:35 agis_schedconf.cvmfs.json
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas   1603667 Jun  3 10:35 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:47:56] drwx------ 4 boincer umatlas      4096 Jun  3 10:35 pilot3
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas      6228 Jun  3 11:45 init_data.xml
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas 180289435 Jun  3 11:46 HITS.45006595._031648.pool.root.1
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas        95 Jun  3 11:47 pilot_heartbeat.json
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas       529 Jun  3 11:47 boinc_task_state.xml
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas      1048 Jun  3 11:47 memory_monitor_summary.json
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas    324954 Jun  3 11:47 log.45006595._031648.job.log.tgz.1
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas      7742 Jun  3 11:47 heartbeat.json
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas        27 Jun  3 11:47 wrapper_checkpoint.txt
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 11:47 boinc_mmap_file
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas      4816 Jun  3 11:47 pilotlog.txt
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas    434001 Jun  3 11:47 log.45006595._031648.job.log.1
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas       357 Jun  3 11:47 output.list
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas       620 Jun  3 11:47 runtime_log
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas    778240 Jun  3 11:47 result.tar.gz
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 11:47 runtime_log.err
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas       657 Jun  3 11:47 9TXLDmKYfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMwjKDmc9SZ4m.diag
[2025-06-03 11:47:56] -rw-r--r-- 1 boincer umatlas     21310 Jun  3 11:47 stderr.txt
[2025-06-03 11:47:56] HITS file was successfully produced:
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas 180289435 Jun  3 11:46 shared/HITS.pool.root.1
[2025-06-03 11:47:56]  *** Contents of shared directory: ***
[2025-06-03 11:47:56] total 388552
[2025-06-03 11:47:56] -rw-r--r-- 2 boincer umatlas 216273334 Jun  3 10:35 ATLAS.root_0
[2025-06-03 11:47:56] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 10:35 input.tar.gz
[2025-06-03 11:47:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:35 start_atlas.sh
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas 180289435 Jun  3 11:46 HITS.pool.root.1
[2025-06-03 11:47:56] -rw------- 1 boincer umatlas    778240 Jun  3 11:47 result.tar.gz
11:47:57 (2088): run_atlas exited; CPU time 37923.142429
11:47:57 (2088): called boinc_finish(0)

</stderr_txt>
]]>

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