Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:33:52 (32336): wrapper (7.7.26015): starting
10:33:52 (32336): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:33:52] Arguments: --nthreads 8
[2025-06-03 10:33:52] Threads: 8
[2025-06-03 10:33:52] Checking for CVMFS
[2025-06-03 10:33:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:33:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:33:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:33:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:33:52] 2.11.2.0 21479 67643 434656 146746 1 55 16500271 18432001 2749 130560 0 106253966 98.637 312805970 36554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 10:33:52] CVMFS is ok
[2025-06-03 10:33:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:33:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:33:52] Further information can be found at the LHC@home message board.
[2025-06-03 10:33:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:33:52] Checking for apptainer binary...
[2025-06-03 10:33:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:33:52] Running /usr/bin/apptainer --version
[2025-06-03 10:33:52] apptainer version 1.3.2-1.el7
[2025-06-03 10:33:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:33:53] c-211-24.aglt2.org
[2025-06-03 10:33:53] apptainer works
[2025-06-03 10:33:53] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:33:53] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:33:53] Starting ATLAS job with PandaID=6677601330
[2025-06-03 10:33:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:08:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:08:24] 2025-06-03 17:08:04,827 | INFO     | extracted standard info from prmon json
[2025-06-03 13:08:24] 2025-06-03 17:08:04,827 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:08:24] 2025-06-03 17:08:04,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:08:24] 2025-06-03 17:08:04,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:08:24] 2025-06-03 17:08:04,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:08:24] 2025-06-03 17:08:04,830 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:08:24] 2025-06-03 17:08:04,830 | INFO     | sum of square deviations: 1067554900.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,831 | INFO     | sum of deviations: 12120108665.999996
[2025-06-03 13:08:24] 2025-06-03 17:08:04,835 | INFO     | mean x: 1748965844.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,835 | INFO     | mean y: 2472469.8741721855
[2025-06-03 13:08:24] 2025-06-03 17:08:04,835 | INFO     | -- intersect: -19853795420.800488
[2025-06-03 13:08:24] 2025-06-03 17:08:04,835 | INFO     | intersect: -19853795420.800488
[2025-06-03 13:08:24] 2025-06-03 17:08:04,836 | INFO     | chi2: 1.3621287231088057
[2025-06-03 13:08:24] 2025-06-03 17:08:04,836 | INFO     | sum of square deviations: 964976232.5
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | sum of deviations: 11820569782.500002
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | mean x: 1748965691.5
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | mean y: 2472024.404109589
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | -- intersect: -21421652536.688766
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | intersect: -21421652536.688766
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | chi2: 1.3635910626815297
[2025-06-03 13:08:24] 2025-06-03 17:08:04,837 | INFO     | current chi2=1.3635910626815297 (change=-0.10735692948214877 %)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,838 | INFO     | right removable region: 145
[2025-06-03 13:08:24] 2025-06-03 17:08:04,838 | INFO     | sum of square deviations: 964976232.5
[2025-06-03 13:08:24] 2025-06-03 17:08:04,838 | INFO     | sum of deviations: -8186060005.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,839 | INFO     | mean x: 1748965996.5
[2025-06-03 13:08:24] 2025-06-03 17:08:04,839 | INFO     | mean y: 2502121.191780822
[2025-06-03 13:08:24] 2025-06-03 17:08:04,839 | INFO     | -- intersect: 14839282667.549559
[2025-06-03 13:08:24] 2025-06-03 17:08:04,839 | INFO     | intersect: 14839282667.549559
[2025-06-03 13:08:24] 2025-06-03 17:08:04,839 | INFO     | chi2: 0.01378977191207544
[2025-06-03 13:08:24] 2025-06-03 17:08:04,839 | INFO     | current chi2=0.01378977191207544 (change=98.98763078128161 %)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,840 | INFO     | sum of square deviations: 869188390.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,840 | INFO     | sum of deviations: -7742218514.999999
[2025-06-03 13:08:24] 2025-06-03 17:08:04,840 | INFO     | mean x: 1748966149.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,840 | INFO     | mean y: 2501407.3829787234
[2025-06-03 13:08:24] 2025-06-03 17:08:04,840 | INFO     | -- intersect: 15581262302.815609
[2025-06-03 13:08:24] 2025-06-03 17:08:04,841 | INFO     | intersect: 15581262302.815609
[2025-06-03 13:08:24] 2025-06-03 17:08:04,841 | INFO     | chi2: 0.013448634939420445
[2025-06-03 13:08:24] 2025-06-03 17:08:04,841 | INFO     | current chi2=0.013448634939420445 (change=2.4738405742321827 %)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,841 | INFO     | left removable region: 20
[2025-06-03 13:08:24] 2025-06-03 17:08:04,841 | INFO     | sum of square deviations: 605592750.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | sum of deviations: -5301851173.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | mean x: 1748966271.0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | mean y: 2498149.016
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | -- intersect: 15314370484.737963
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | intersect: 15314370484.737963
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | chi2: 0.012489084845669962
[2025-06-03 13:08:24] 2025-06-03 17:08:04,842 | INFO     | -- intersect: 15314370484.737963
[2025-06-03 13:08:24] 2025-06-03 17:08:04,843 | INFO     | current memory leak: -8.75 B/s (using 125 data points, chi2=0.01)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,843 | INFO     | ..............................
[2025-06-03 13:08:24] 2025-06-03 17:08:04,843 | INFO     | . Timing measurements:
[2025-06-03 13:08:24] 2025-06-03 17:08:04,843 | INFO     | . get job = 0 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,843 | INFO     | . initial setup = 2 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,844 | INFO     | . payload setup = 6 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,844 | INFO     | . stage-in = 0 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,844 | INFO     | . payload execution = 9208 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,844 | INFO     | . stage-out = 0 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,844 | INFO     | . log creation = 0 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,844 | INFO     | ..............................
[2025-06-03 13:08:24] 2025-06-03 17:08:04,876 | INFO     | sufficient remaining disk space (55276732416 B)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,897 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,934 | INFO     | 
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | job summary report
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | --------------------------------------------------
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | PanDA job id: 6677601330
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | task id: 45006595
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | errors: (none)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:08:24] 2025-06-03 17:08:04,935 | INFO     | pilot state: finished 
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | transexitcode: 0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | exeerrorcode: 0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | exeerrordiag: 
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | exitcode: 0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | exitmsg: OK
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | cpuconsumptiontime: 69291 s
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | nevents: 400
[2025-06-03 13:08:24] 2025-06-03 17:08:04,936 | INFO     | neventsw: 0
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | pid: 3989
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | pgrp: 3989
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | corecount: 8
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | event service: False
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 9219: 2433582, 9220: 2442523, 9222: 2442707, 9227: 2442877}
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | --------------------------------------------------
[2025-06-03 13:08:24] 2025-06-03 17:08:04,937 | INFO     | 
[2025-06-03 13:08:24] 2025-06-03 17:08:04,938 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 13:08:24] 2025-06-03 17:08:04,938 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6677601330: 3866750 B (within 2537553920 B limit)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,942 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6677601330/HITS.45006595._031126.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,942 | INFO     | total size of present files: 0 B (workdir size: 3866750 B)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,942 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6677601330/HITS.45006595._031126.pool.root.1 since it does not exist
[2025-06-03 13:08:24] 2025-06-03 17:08:04,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,958 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,958 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,958 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,958 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:08:24] 2025-06-03 17:08:04,959 | INFO     | job 6677601330 has completed (purged errors)
[2025-06-03 13:08:24] 2025-06-03 17:08:04,959 | INFO     | overall cleanup function is called
[2025-06-03 13:08:24] 2025-06-03 17:08:05,162 | INFO     | number of running child processes to parent process 3989: 1
[2025-06-03 13:08:24] 2025-06-03 17:08:05,163 | INFO     | maximum number of monitored processes: 6
[2025-06-03 13:08:24] 2025-06-03 17:08:05,163 | INFO     | aborting job monitoring since job object (job id=6677601330) has expired
[2025-06-03 13:08:24] 2025-06-03 17:08:05,968 | INFO     | --- collectZombieJob: --- 10, [3989]
[2025-06-03 13:08:24] 2025-06-03 17:08:05,969 | INFO     | zombie collector waiting for pid 3989
[2025-06-03 13:08:24] 2025-06-03 17:08:05,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:08:24] 2025-06-03 17:08:05,969 | INFO     | collected zombie processes
[2025-06-03 13:08:24] 2025-06-03 17:08:05,969 | INFO     | will attempt to kill all subprocesses of pid=3989
[2025-06-03 13:08:24] 2025-06-03 17:08:06,218 | INFO     | process IDs to be killed: [3989] (in reverse order)
[2025-06-03 13:08:24] 2025-06-03 17:08:06,272 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:08:24] 2025-06-03 17:08:06,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:08:24] 2025-06-03 17:08:06,277 | INFO     | did not find any defunct processes belonging to 3989
[2025-06-03 13:08:24] 2025-06-03 17:08:06,280 | INFO     | did not find any defunct processes belonging to 3989
[2025-06-03 13:08:24] 2025-06-03 17:08:06,280 | INFO     | ready for new job
[2025-06-03 13:08:24] 2025-06-03 17:08:06,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:08:24] 2025-06-03 17:08:06,282 | INFO     | **************************************
[2025-06-03 13:08:24] 2025-06-03 17:08:06,282 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:08:24] 2025-06-03 17:08:06,282 | INFO     | **************************************
[2025-06-03 13:08:24] 2025-06-03 17:08:06,282 | INFO     | 
[2025-06-03 13:08:24] 2025-06-03 17:08:06,283 | INFO     | architecture information:
[2025-06-03 13:08:24] 2025-06-03 17:08:06,284 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:08:24] 2025-06-03 17:08:06,297 | INFO     | cat /etc/os-release:
[2025-06-03 13:08:24] NAME="CentOS Linux"
[2025-06-03 13:08:24] VERSION="7 (Core)"
[2025-06-03 13:08:24] ID="centos"
[2025-06-03 13:08:24] ID_LIKE="rhel fedora"
[2025-06-03 13:08:24] VERSION_ID="7"
[2025-06-03 13:08:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:08:24] ANSI_COLOR="0;31"
[2025-06-03 13:08:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:08:24] HOME_URL="https://www.centos.org/"
[2025-06-03 13:08:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:08:24] 
[2025-06-03 13:08:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:08:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:08:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:08:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:08:24] 
[2025-06-03 13:08:24] 2025-06-03 17:08:06,298 | INFO     | **************************************
[2025-06-03 13:08:24] 2025-06-03 17:08:06,801 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 13:08:24] 2025-06-03 17:08:06,819 | INFO     | sufficient remaining disk space (55280926720 B)
[2025-06-03 13:08:24] 2025-06-03 17:08:06,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:08:24] 2025-06-03 17:08:06,820 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:08:24] 2025-06-03 17:08:06,820 | INFO     | update_server=False
[2025-06-03 13:08:24] 2025-06-03 17:08:06,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:08:24] 2025-06-03 17:08:06,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:08:24] 2025-06-03 17:08:06,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:08:24] 2025-06-03 17:08:06,821 | INFO     | aborting loop
[2025-06-03 13:08:24] 2025-06-03 17:08:06,997 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:08:24] 2025-06-03 17:08:06,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:08:24] 2025-06-03 17:08:06,998 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:08:24] 2025-06-03 17:08:07,190 | INFO     | all data control threads have been joined
[2025-06-03 13:08:24] 2025-06-03 17:08:07,823 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:07,823 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:07,826 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:07,899 | INFO     | all payload control threads have been joined
[2025-06-03 13:08:24] 2025-06-03 17:08:07,915 | INFO     | all job control threads have been joined
[2025-06-03 13:08:24] 2025-06-03 17:08:07,970 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,066 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:08:24] 2025-06-03 17:08:08,196 | INFO     | [data] control thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,229 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,290 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,818 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,819 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,904 | INFO     | [payload] control thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:08,920 | INFO     | [job] control thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:09,198 | INFO     | [job] validate thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:10,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:08:24] 2025-06-03 17:08:10,146 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:14,122 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:17,335 | INFO     | job.realtimelogging is not enabled
[2025-06-03 13:08:24] 2025-06-03 17:08:18,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:08:24] 2025-06-03 17:08:18,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631986923328)>', '<ExcThread(monitor, started 140631674427136)>']
[2025-06-03 13:08:24] 2025-06-03 17:08:19,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:08:24] 2025-06-03 17:08:19,056 | INFO     | [monitor] control thread has ended
[2025-06-03 13:08:24] 2025-06-03 17:08:23,919 | INFO     | all workflow threads have been joined
[2025-06-03 13:08:24] 2025-06-03 17:08:23,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:08:24] 2025-06-03 17:08:23,919 | INFO     | traces error code: 0
[2025-06-03 13:08:24] 2025-06-03 17:08:23,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:08:24] 2025-06-03 17:08:24,027 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:08:24] 2025-06-03 17:08:24,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:08:24] 2025-06-03 17:08:24,032 [wrapper] pilotpid: 37925
[2025-06-03 13:08:24] 2025-06-03 17:08:24,034 [wrapper] Pilot exit status: 0
[2025-06-03 13:08:24] 2025-06-03 17:08:24,044 [wrapper] pandaids: 6677601330
[2025-06-03 13:08:24] 2025-06-03 17:08:24,079 [wrapper] cleanup supervisor_pilot 46067 37926
[2025-06-03 13:08:24] 2025-06-03 17:08:24,082 [wrapper] Test setup, not cleaning
[2025-06-03 13:08:24] 2025-06-03 17:08:24,084 [wrapper] apfmon messages muted
[2025-06-03 13:08:24] 2025-06-03 17:08:24,086 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:08:24] 2025-06-03 17:08:24,089 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:08:24]  *** Error codes and diagnostics ***
[2025-06-03 13:08:24]     "exeErrorCode": 0,
[2025-06-03 13:08:24]     "exeErrorDiag": "",
[2025-06-03 13:08:24]     "pilotErrorCode": 0,
[2025-06-03 13:08:24]     "pilotErrorDiag": "",
[2025-06-03 13:08:24]  *** Listing of results directory ***
[2025-06-03 13:08:24] total 389460
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 07:43 pilot3.tar.gz
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 07:47 queuedata.json
[2025-06-03 13:08:24] -rwx------ 1 boincer umatlas     37140 Jun  3 07:47 runpilot2-wrapper.sh
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas       100 Jun  3 10:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:08:24] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 10:33 run_atlas
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas       105 Jun  3 10:33 job.xml
[2025-06-03 13:08:24] -rw-r--r-- 2 boincer umatlas 214509366 Jun  3 10:33 EVNT.45006593._001248.pool.root.1
[2025-06-03 13:08:24] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:33 start_atlas.sh
[2025-06-03 13:08:24] drwxrwx--x 2 boincer umatlas      4096 Jun  3 10:33 shared
[2025-06-03 13:08:24] -rw-r--r-- 2 boincer umatlas    508886 Jun  3 10:33 input.tar.gz
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas         0 Jun  3 10:33 boinc_lockfile
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 10:33 pandaJob.out
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas    982716 Jun  3 10:34 agis_schedconf.cvmfs.json
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas   1603667 Jun  3 10:34 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:08:24] drwx------ 4 boincer umatlas      4096 Jun  3 10:34 pilot3
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas      6035 Jun  3 13:03 init_data.xml
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas 178060185 Jun  3 13:07 HITS.45006595._031126.pool.root.1
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas       529 Jun  3 13:07 boinc_task_state.xml
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas      1048 Jun  3 13:07 memory_monitor_summary.json
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas    356406 Jun  3 13:07 log.45006595._031126.job.log.tgz.1
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas        95 Jun  3 13:07 pilot_heartbeat.json
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas      7736 Jun  3 13:08 heartbeat.json
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 13:08 boinc_mmap_file
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas        27 Jun  3 13:08 wrapper_checkpoint.txt
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas      4425 Jun  3 13:08 pilotlog.txt
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas    846390 Jun  3 13:08 log.45006595._031126.job.log.1
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas       357 Jun  3 13:08 output.list
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas       620 Jun  3 13:08 runtime_log
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas   1218560 Jun  3 13:08 result.tar.gz
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 13:08 runtime_log.err
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas       658 Jun  3 13:08 nLyLDmLIfg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFVYKDm0VrWvm.diag
[2025-06-03 13:08:24] -rw-r--r-- 1 boincer umatlas     21177 Jun  3 13:08 stderr.txt
[2025-06-03 13:08:24] HITS file was successfully produced:
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas 178060185 Jun  3 13:07 shared/HITS.pool.root.1
[2025-06-03 13:08:24]  *** Contents of shared directory: ***
[2025-06-03 13:08:24] total 385088
[2025-06-03 13:08:24] -rw-r--r-- 2 boincer umatlas 214509366 Jun  3 10:33 ATLAS.root_0
[2025-06-03 13:08:24] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:33 start_atlas.sh
[2025-06-03 13:08:24] -rw-r--r-- 2 boincer umatlas    508886 Jun  3 10:33 input.tar.gz
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas 178060185 Jun  3 13:07 HITS.pool.root.1
[2025-06-03 13:08:24] -rw------- 1 boincer umatlas   1218560 Jun  3 13:08 result.tar.gz
13:08:26 (32336): run_atlas exited; CPU time 69476.622700
13:08:26 (32336): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN