Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-03 17:50:13 (56332): Detected: vboxwrapper 26206
2025-06-03 17:50:13 (56332): Detected: BOINC client v7.20.5
2025-06-03 17:50:13 (56332): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-06-03 17:50:13 (56332): Successfully copied 'init_data.xml' to the shared directory.
2025-06-03 17:50:14 (56332): Create VM. (boinc_6fb774a6ee59c4e2, slot#6)
2025-06-03 17:50:14 (56332): Setting Memory Size for VM. (4800MB)
2025-06-03 17:50:14 (56332): Setting CPU Count for VM. (8)
2025-06-03 17:50:14 (56332): Setting Chipset Options for VM.
2025-06-03 17:50:14 (56332): Setting Graphics Controller Options for VM.
2025-06-03 17:50:14 (56332): Setting Boot Options for VM.
2025-06-03 17:50:14 (56332): Setting Network Configuration for NAT.
2025-06-03 17:50:14 (56332): Enabling VM Network Access.
2025-06-03 17:50:14 (56332): Disabling USB Support for VM.
2025-06-03 17:50:14 (56332): Disabling COM Port Support for VM.
2025-06-03 17:50:14 (56332): Disabling LPT Port Support for VM.
2025-06-03 17:50:14 (56332): Disabling Audio Support for VM.
2025-06-03 17:50:14 (56332): Disabling Clipboard Support for VM.
2025-06-03 17:50:14 (56332): Disabling Drag and Drop Support for VM.
2025-06-03 17:50:14 (56332): Adding storage controller(s) to VM.
2025-06-03 17:50:14 (56332): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-03 17:50:15 (56332): Adding VirtualBox Guest Additions to VM.
2025-06-03 17:50:16 (56332): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-03 17:50:16 (56332): forwarding host port 50647 to guest port 80
2025-06-03 17:50:16 (56332): Enabling remote desktop for VM.
2025-06-03 17:50:16 (56332): Required extension pack not installed, remote desktop not enabled.
2025-06-03 17:50:16 (56332): Enabling shared directory for VM.
2025-06-03 17:50:16 (56332): Starting VM using VBoxManage interface. (boinc_6fb774a6ee59c4e2, slot#6)
2025-06-03 17:50:17 (56332): Successfully started VM. (PID = '56910')
2025-06-03 17:50:17 (56332): Reporting VM Process ID to BOINC.
2025-06-03 17:50:17 (56332): Guest Log: BIOS: VirtualBox 7.0.18
2025-06-03 17:50:17 (56332): Guest Log: CPUID EDX: 0x178bfbff
2025-06-03 17:50:17 (56332): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-03 17:50:17 (56332): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-03 17:50:17 (56332): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-03 17:50:17 (56332): Detected: Web Application Enabled (http://localhost:50647)
2025-06-03 17:50:17 (56332): Preference change detected
2025-06-03 17:50:17 (56332): Setting CPU throttle for VM. (100%)
2025-06-03 17:50:17 (56332): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-03 17:50:19 (56332): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-03 17:50:19 (56332): Guest Log: BIOS: Booting from Hard Disk...
2025-06-03 17:50:22 (56332): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-03 17:50:22 (56332): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-03 17:50:22 (56332): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-03 17:50:30 (56332): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-03 17:50:30 (56332): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-03 17:50:34 (56332): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000077 main     Log opened 2025-06-03T15:50:31.922705000Z
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000132 main     OS Product: Linux
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000146 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000157 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000169 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000170 main     Process ID: 1365
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000170 main     Package type: LINUX_64BITS_GENERIC
2025-06-03 17:50:34 (56332): Guest Log: 00:00:00.000574 main     5.2.32 r132073 started. Verbose level = 0
2025-06-03 17:50:34 (56332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-03 17:50:34 (56332): Guest Log: [INFO] Mounting shared directory
2025-06-03 17:50:34 (56332): Guest Log: [INFO] Checking for init_data.xml
2025-06-03 17:50:39 (56332): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-03 17:50:39 (56332): Guest Log: [INFO] Detected branch: prod
2025-06-03 17:50:39 (56332): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-03 17:50:39 (56332): Guest Log: Copying input files
2025-06-03 17:50:40 (56332): Guest Log: Copied input files into RunAtlas.
2025-06-03 17:50:40 (56332): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-03 17:50:40 (56332): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-03 17:50:40 (56332): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-03 17:50:40 (56332): Guest Log: Further information can be found at the LHC@home message board.
2025-06-03 17:50:48 (56332): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-03 17:50:49 (56332): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-03 17:50:49 (56332): Guest Log: 2.6.3.0 1642 0 30324 146748 4 1 3120513 4096000 0 65024 0 0 n/a 1290 912 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-03 17:50:50 (56332): Guest Log: copied the webapp to /var/www
2025-06-03 17:50:50 (56332): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-03 17:50:50 (56332): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-03 17:50:50 (56332): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-03 17:50:50 (56332): Guest Log:  *** Starting ATLAS job. (PandaID=6677601767 taskID=45006595) ***
2025-06-03 18:30:46 (56332): Guest Log:  *** Job finished ***
2025-06-03 18:30:46 (56332): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:33,923 | INFO     | [data] queue_monitor thread has finished
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:37,041 | INFO     | job.realtimelogging is not enabled
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:38,042 | INFO     | [payload] run_realtimelog thread has finished
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:39,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668732049216)>', '<ExcThread(monitor, started 139668125357824)>']
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:39,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:39,460 | INFO     | [monitor] control thread has ended
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,029 | INFO     | all workflow threads have been joined
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,029 | INFO     | end of generic workflow (traces error code: 0)
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,030 | INFO     | traces error code: 0
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,081 [wrapper] ==== pilot stdout END ====
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,084 [wrapper] ==== wrapper stdout RESUME ====
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,087 [wrapper] pilotpid: 5992
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,089 [wrapper] Pilot exit status: 0
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,344 [wrapper] pandaids: 6677601767
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,356 [wrapper] cleanup supervisor_pilot 19464 5993
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,359 [wrapper] Test setup, not cleaning
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,364 [wrapper] apfmon messages muted
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,367 [wrapper] ==== wrapper stdout END ====
2025-06-03 18:30:46 (56332): Guest Log: 2025-06-03 16:30:44,370 [wrapper] ==== wrapper stderr END ====
2025-06-03 18:30:46 (56332): Guest Log:  *** Error codes and diagnostics ***
2025-06-03 18:30:46 (56332): Guest Log:     "exeErrorCode": 0,
2025-06-03 18:30:46 (56332): Guest Log:     "exeErrorDiag": "",
2025-06-03 18:30:46 (56332): Guest Log:     "pilotErrorCode": 0,
2025-06-03 18:30:46 (56332): Guest Log:     "pilotErrorDiag": "",
2025-06-03 18:30:46 (56332): Guest Log:  *** Listing of results directory ***
2025-06-03 18:30:46 (56332): Guest Log: total 182444
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 11:50 queuedata.json
2025-06-03 18:30:46 (56332): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 11:50 runpilot2-wrapper.sh
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 11:50 pilot3.tar.gz
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas     15093 Jun  3 15:50 start_atlas.sh
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas    508869 Jun  3 15:50 input.tar.gz
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas      9436 Jun  3 15:50 init_data.xml
2025-06-03 18:30:46 (56332): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  3 15:50 EVNT.45006593._001261.pool.root.1 -> /data/./ATLAS.root_0
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  3 15:50 pandaJob.out
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas    983735 Jun  3 15:51 agis_schedconf.cvmfs.json
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  3 15:51 agis_ddmendpoints.agis.ALL.json
2025-06-03 18:30:46 (56332): Guest Log: drwx------. 4 atlas atlas      4096 Jun  3 15:52 pilot3
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas 182033353 Jun  3 16:29 HITS.45006595._031370.pool.root.1
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas        95 Jun  3 16:30 pilot_heartbeat.json
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas      1025 Jun  3 16:30 memory_monitor_summary.json
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas    276551 Jun  3 16:30 log.45006595._031370.job.log.tgz.1
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas      7706 Jun  3 16:30 heartbeat.json
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas      4485 Jun  3 16:30 pilotlog.txt
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas    234061 Jun  3 16:30 log.45006595._031370.job.log.1
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas       357 Jun  3 16:30 output.list
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  3 16:30 runtime_log
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas    532480 Jun  3 16:30 result.tar.gz
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 atlas atlas      8580 Jun  3 16:30 runtime_log.err
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas       647 Jun  3 16:30 jEcKDmTLfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtsjKDmGBosbn.diag
2025-06-03 18:30:46 (56332): Guest Log: Looking for outputfile HITS.45006595._031370.pool.root.1
2025-06-03 18:30:46 (56332): Guest Log: HITS file was successfully produced
2025-06-03 18:30:46 (56332): Guest Log: -rw-------. 1 atlas atlas 182033353 Jun  3 16:29 /home/atlas/RunAtlas/HITS.45006595._031370.pool.root.1
2025-06-03 18:30:46 (56332): Guest Log: Successfully finished the ATLAS job!
2025-06-03 18:30:46 (56332): Guest Log: Copying the results back to the shared directory!
2025-06-03 18:30:46 (56332): Guest Log:  *** Contents of shared directory: ***
2025-06-03 18:30:46 (56332): Guest Log: total 210648
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 root root 214628665 Jun  3 15:50 ATLAS.root_0
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 root root      9436 Jun  3 15:50 init_data.xml
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 root root    508869 Jun  3 15:50 input.tar.gz
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 root root    532480 Jun  3  2025 result.tar.gz
2025-06-03 18:30:46 (56332): Guest Log: -rw-r--r--. 1 root root     15093 Jun  3 15:50 start_atlas.sh
2025-06-03 18:30:46 (56332): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-03 18:30:46 (56332): VM Completion File Detected.
2025-06-03 18:30:46 (56332): Powering off VM.
2025-06-03 18:30:47 (56332): Successfully stopped VM.
2025-06-03 18:30:47 (56332): Deregistering VM. (boinc_6fb774a6ee59c4e2, slot#6)
2025-06-03 18:30:47 (56332): Removing network bandwidth throttle group from VM.
2025-06-03 18:30:47 (56332): Removing VM from VirtualBox.
18:30:52 (56332): called boinc_finish(0)

</stderr_txt>
]]>

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