Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:30 (1633936): wrapper (7.7.26015): starting
10:31:30 (1633936): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:31:30] Arguments: --nthreads 8
[2025-06-03 10:31:30] Threads: 8
[2025-06-03 10:31:30] Checking for CVMFS
[2025-06-03 10:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:31:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:31:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:31:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:31:30] 2.12.6.0 956287 146964 218156 146745 1 111 18500873 32935937 3825 130560 0 382232354 99.654 358329066 26170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 10:31:30] CVMFS is ok
[2025-06-03 10:31:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:31:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:31:30] Further information can be found at the LHC@home message board.
[2025-06-03 10:31:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:31:30] Checking for apptainer binary...
[2025-06-03 10:31:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:31:30] Running /usr/bin/apptainer --version
[2025-06-03 10:31:30] apptainer version 1.4.1-1.el9
[2025-06-03 10:31:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:31:31] c-6-4.aglt2.org
[2025-06-03 10:31:31] apptainer works
[2025-06-03 10:31:31] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:31:31] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:31:31] Starting ATLAS job with PandaID=6677601736
[2025-06-03 10:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:05:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:05:25]  is_altstaged=None
[2025-06-03 12:05:25]  is_tar=False
[2025-06-03 12:05:25]  lfn=log.45006595._031339.job.log.tgz.1
[2025-06-03 12:05:25]  mtime=0
[2025-06-03 12:05:25]  protocol_id=None
[2025-06-03 12:05:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 12:05:25]  replicas=None
[2025-06-03 12:05:25]  scope=mc23_13p6TeV
[2025-06-03 12:05:25]  status=None
[2025-06-03 12:05:25]  status_code=0
[2025-06-03 12:05:25]  storage_token=
[2025-06-03 12:05:25]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6677601736/log.45006595._031339.job.log.tgz.1
[2025-06-03 12:05:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/43/log.45006595._031339.job.log.tgz.1
[2025-06-03 12:05:25]  workdir=None
[2025-06-03 12:05:25] ]
[2025-06-03 12:05:25] 2025-06-03 16:05:02,406 | INFO     | transferring file log.45006595._031339.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6677601736/log.45006595._031339.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 12:05:25] 2025-06-03 16:05:02,406 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6677601736/log.45006595._031339.job.log.tgz.1 /tmp/boinchome/slots/3/log.45006595._031339.job
[2025-06-03 12:05:25] 2025-06-03 16:05:02,423 | INFO     | adding to output.list: log.45006595._031339.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/43/log.45006595._031339.job.log.tg
[2025-06-03 12:05:25] 2025-06-03 16:05:02,424 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 12:05:25] 2025-06-03 16:05:02,424 | INFO     | summary of transferred files:
[2025-06-03 12:05:25] 2025-06-03 16:05:02,424 | INFO     |  -- lfn=log.45006595._031339.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 12:05:25] 2025-06-03 16:05:02,424 | INFO     | stage-out finished correctly
[2025-06-03 12:05:25] 2025-06-03 16:05:03,636 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 12:05:25] 2025-06-03 16:05:05,232 | WARNING  | process 1646070 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 12:05:25] 2025-06-03 16:05:05,233 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677601736/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:05:25] 2025-06-03 16:05:05,542 | INFO     | number of running child processes to parent process 1646070: 1
[2025-06-03 12:05:25] 2025-06-03 16:05:05,542 | INFO     | maximum number of monitored processes: 6
[2025-06-03 12:05:25] 2025-06-03 16:05:06,457 | INFO     | job 6677601736 has state=finished
[2025-06-03 12:05:25] 2025-06-03 16:05:06,457 | INFO     | preparing for final server update for job 6677601736 in state='finished'
[2025-06-03 12:05:25] 2025-06-03 16:05:06,520 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 12:05:25] 2025-06-03 16:05:06,520 | INFO     | this job has now completed (state=finished)
[2025-06-03 12:05:25] 2025-06-03 16:05:06,521 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:05:25] 2025-06-03 16:05:06,521 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:05:25] 2025-06-03 16:05:06,521 | INFO     | job 6677601736 has finished - writing final server update
[2025-06-03 12:05:25] 2025-06-03 16:05:06,521 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:05:25] 2025-06-03 16:05:06,537 | INFO     | executing command: lscpu
[2025-06-03 12:05:25] 2025-06-03 16:05:06,591 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:05:25] 2025-06-03 16:05:06,704 | INFO     | PID=1639403 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 12:05:25] 2025-06-03 16:05:06,705 | INFO     | .. there are 5 such processes running
[2025-06-03 12:05:25] 2025-06-03 16:05:08,046 | INFO     | monitor loop #416: job 0:6677601736 is in state 'finished'
[2025-06-03 12:05:25] 2025-06-03 16:05:08,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:05:25] 2025-06-03 16:05:09,993 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 12:05:25] 2025-06-03 16:05:09,994 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6677601736/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:05:25] 2025-06-03 16:05:09,995 | INFO     | extracted standard info from prmon json
[2025-06-03 12:05:25] 2025-06-03 16:05:09,995 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:05:25] 2025-06-03 16:05:09,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:05:25] 2025-06-03 16:05:09,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:05:25] 2025-06-03 16:05:09,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:05:25] 2025-06-03 16:05:09,998 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:05:25] 2025-06-03 16:05:09,998 | INFO     | sum of square deviations: 190403570.0
[2025-06-03 12:05:25] 2025-06-03 16:05:09,998 | INFO     | sum of deviations: -12968905.000001073
[2025-06-03 12:05:25] 2025-06-03 16:05:09,999 | INFO     | mean x: 1748963993.0
[2025-06-03 12:05:25] 2025-06-03 16:05:09,999 | INFO     | mean y: 2176519.0705882353
[2025-06-03 12:05:25] 2025-06-03 16:05:09,999 | INFO     | -- intersect: 121303213.35284115
[2025-06-03 12:05:25] 2025-06-03 16:05:09,999 | INFO     | intersect: 121303213.35284115
[2025-06-03 12:05:25] 2025-06-03 16:05:09,999 | INFO     | chi2: 1.2465816857871959
[2025-06-03 12:05:25] 2025-06-03 16:05:09,999 | INFO     | -- intersect: 121303213.35284115
[2025-06-03 12:05:25] 2025-06-03 16:05:10,000 | INFO     | current memory leak: -0.07 B/s (using 85 data points, chi2=1.25)
[2025-06-03 12:05:25] 2025-06-03 16:05:10,000 | INFO     | ..............................
[2025-06-03 12:05:25] 2025-06-03 16:05:10,000 | INFO     | . Timing measurements:
[2025-06-03 12:05:25] 2025-06-03 16:05:10,000 | INFO     | . get job = 0 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,000 | INFO     | . initial setup = 2 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,000 | INFO     | . payload setup = 6 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,001 | INFO     | . stage-in = 0 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,001 | INFO     | . payload execution = 5575 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,001 | INFO     | . stage-out = 0 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,001 | INFO     | . log creation = 0 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,001 | INFO     | ..............................
[2025-06-03 12:05:25] 2025-06-03 16:05:10,113 | INFO     | 
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | job summary report
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | --------------------------------------------------
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | PanDA job id: 6677601736
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | task id: 45006595
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | errors: (none)
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | pilot state: finished 
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | transexitcode: 0
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | exeerrorcode: 0
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | exeerrordiag: 
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | exitcode: 0
[2025-06-03 12:05:25] 2025-06-03 16:05:10,114 | INFO     | exitmsg: OK
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | cpuconsumptiontime: 36192 s
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | nevents: 400
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | neventsw: 0
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | pid: 1646070
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | pgrp: 1646070
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | corecount: 8
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | event service: False
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | sizes: {0: 2405185, 1: 2405185, 4: 2405419, 11: 2405447, 5585: 2431963, 5586: 2440904, 5588: 2441088, 5594: 2441258}
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | --------------------------------------------------
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | 
[2025-06-03 12:05:25] 2025-06-03 16:05:10,115 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | job 6677601736 has completed (purged errors)
[2025-06-03 12:05:25] 2025-06-03 16:05:10,128 | INFO     | overall cleanup function is called
[2025-06-03 12:05:25] 2025-06-03 16:05:11,135 | INFO     | --- collectZombieJob: --- 10, [1646070]
[2025-06-03 12:05:25] 2025-06-03 16:05:11,136 | INFO     | zombie collector waiting for pid 1646070
[2025-06-03 12:05:25] 2025-06-03 16:05:11,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:05:25] 2025-06-03 16:05:11,136 | INFO     | collected zombie processes
[2025-06-03 12:05:25] 2025-06-03 16:05:11,136 | INFO     | will attempt to kill all subprocesses of pid=1646070
[2025-06-03 12:05:25] 2025-06-03 16:05:11,403 | INFO     | process IDs to be killed: [1646070] (in reverse order)
[2025-06-03 12:05:25] 2025-06-03 16:05:11,472 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:05:25] 2025-06-03 16:05:11,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:05:25] 2025-06-03 16:05:11,481 | INFO     | did not find any defunct processes belonging to 1646070
[2025-06-03 12:05:25] 2025-06-03 16:05:11,488 | INFO     | did not find any defunct processes belonging to 1646070
[2025-06-03 12:05:25] 2025-06-03 16:05:11,488 | INFO     | ready for new job
[2025-06-03 12:05:25] 2025-06-03 16:05:11,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:05:25] 2025-06-03 16:05:11,490 | INFO     | **************************************
[2025-06-03 12:05:25] 2025-06-03 16:05:11,490 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:05:25] 2025-06-03 16:05:11,491 | INFO     | **************************************
[2025-06-03 12:05:25] 2025-06-03 16:05:11,491 | INFO     | 
[2025-06-03 12:05:25] 2025-06-03 16:05:11,505 | INFO     | architecture information:
[2025-06-03 12:05:25] 2025-06-03 16:05:11,505 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:05:25] 2025-06-03 16:05:11,517 | INFO     | cat /etc/os-release:
[2025-06-03 12:05:25] NAME="CentOS Linux"
[2025-06-03 12:05:25] VERSION="7 (Core)"
[2025-06-03 12:05:25] ID="centos"
[2025-06-03 12:05:25] ID_LIKE="rhel fedora"
[2025-06-03 12:05:25] VERSION_ID="7"
[2025-06-03 12:05:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:05:25] ANSI_COLOR="0;31"
[2025-06-03 12:05:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:05:25] HOME_URL="https://www.centos.org/"
[2025-06-03 12:05:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:05:25] 
[2025-06-03 12:05:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:05:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:05:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:05:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:05:25] 
[2025-06-03 12:05:25] 2025-06-03 16:05:11,518 | INFO     | **************************************
[2025-06-03 12:05:25] 2025-06-03 16:05:12,020 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-03 12:05:25] 2025-06-03 16:05:12,033 | INFO     | sufficient remaining disk space (74490839040 B)
[2025-06-03 12:05:25] 2025-06-03 16:05:12,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:05:25] 2025-06-03 16:05:12,034 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:05:25] 2025-06-03 16:05:12,034 | INFO     | update_server=False
[2025-06-03 12:05:25] 2025-06-03 16:05:12,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:05:25] 2025-06-03 16:05:12,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:05:25] 2025-06-03 16:05:12,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:05:25] 2025-06-03 16:05:12,035 | INFO     | aborting loop
[2025-06-03 12:05:25] 2025-06-03 16:05:12,244 | INFO     | all job control threads have been joined
[2025-06-03 12:05:25] 2025-06-03 16:05:12,342 | INFO     | all payload control threads have been joined
[2025-06-03 12:05:25] 2025-06-03 16:05:12,615 | INFO     | all data control threads have been joined
[2025-06-03 12:05:25] 2025-06-03 16:05:12,725 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:05:25] 2025-06-03 16:05:12,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:05:25] 2025-06-03 16:05:12,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:05:25] 2025-06-03 16:05:13,040 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,040 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,041 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:05:25] 2025-06-03 16:05:13,250 | INFO     | [job] control thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,348 | INFO     | [payload] control thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,354 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,453 | INFO     | [job] validate thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,620 | INFO     | [data] control thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,665 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:13,778 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:14,052 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:14,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:14,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:05:25] 2025-06-03 16:05:14,378 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:14,498 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:15,063 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:18,255 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:05:25] 2025-06-03 16:05:19,810 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554940180288)>', '<ExcThread(monitor, started 140554432124672)>']
[2025-06-03 12:05:25] 2025-06-03 16:05:20,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:05:25] 2025-06-03 16:05:20,766 | INFO     | [monitor] control thread has ended
[2025-06-03 12:05:25] 2025-06-03 16:05:24,835 | INFO     | all workflow threads have been joined
[2025-06-03 12:05:25] 2025-06-03 16:05:24,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:05:25] 2025-06-03 16:05:24,836 | INFO     | traces error code: 0
[2025-06-03 12:05:25] 2025-06-03 16:05:24,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:05:25] 2025-06-03 16:05:24,967 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:05:25] 2025-06-03 16:05:24,969 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:05:25] 2025-06-03 16:05:24,972 [wrapper] pilotpid: 1639403
[2025-06-03 12:05:25] 2025-06-03 16:05:24,975 [wrapper] Pilot exit status: 0
[2025-06-03 12:05:25] 2025-06-03 16:05:24,984 [wrapper] pandaids: 6677601736
[2025-06-03 12:05:25] 2025-06-03 16:05:25,034 [wrapper] cleanup supervisor_pilot 1854119 1639404
[2025-06-03 12:05:25] 2025-06-03 16:05:25,037 [wrapper] Test setup, not cleaning
[2025-06-03 12:05:25] 2025-06-03 16:05:25,039 [wrapper] apfmon messages muted
[2025-06-03 12:05:25] 2025-06-03 16:05:25,042 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:05:25] 2025-06-03 16:05:25,044 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:05:25]  *** Error codes and diagnostics ***
[2025-06-03 12:05:25]     "exeErrorCode": 0,
[2025-06-03 12:05:25]     "exeErrorDiag": "",
[2025-06-03 12:05:25]     "pilotErrorCode": 0,
[2025-06-03 12:05:25]     "pilotErrorDiag": "",
[2025-06-03 12:05:25]  *** Listing of results directory ***
[2025-06-03 12:05:25] total 390056
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:50 queuedata.json
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 07:50 pilot3.tar.gz
[2025-06-03 12:05:25] -rwx------. 1 boincer umatlas     37140 Jun  3 07:52 runpilot2-wrapper.sh
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas       100 Jun  3 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:05:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 10:31 run_atlas
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas       105 Jun  3 10:31 job.xml
[2025-06-03 12:05:25] -rw-r--r--. 2 boincer umatlas 216925419 Jun  3 10:31 EVNT.45006593._001260.pool.root.1
[2025-06-03 12:05:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:31 start_atlas.sh
[2025-06-03 12:05:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 10:31 shared
[2025-06-03 12:05:25] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 10:31 input.tar.gz
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas         0 Jun  3 10:31 boinc_lockfile
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas      2526 Jun  3 10:31 pandaJob.out
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas    982724 Jun  3 10:31 agis_schedconf.cvmfs.json
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas   1603667 Jun  3 10:31 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:05:25] drwx------. 4 boincer umatlas      4096 Jun  3 10:31 pilot3
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 12:04 init_data.xml
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas        95 Jun  3 12:04 pilot_heartbeat.json
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas 176957047 Jun  3 12:04 HITS.45006595._031339.pool.root.1
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas       529 Jun  3 12:04 boinc_task_state.xml
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas      1032 Jun  3 12:04 memory_monitor_summary.json
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas    308488 Jun  3 12:05 log.45006595._031339.job.log.tgz.1
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas      7703 Jun  3 12:05 heartbeat.json
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:05 boinc_mmap_file
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:05 wrapper_checkpoint.txt
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas      4353 Jun  3 12:05 pilotlog.txt
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas    544566 Jun  3 12:05 log.45006595._031339.job.log.1
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas       357 Jun  3 12:05 output.list
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:05 runtime_log
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas    870400 Jun  3 12:05 result.tar.gz
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 12:05 runtime_log.err
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas       649 Jun  3 12:05 4YhLDmFNfg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRtjKDmlQXQSn.diag
[2025-06-03 12:05:25] -rw-r--r--. 1 boincer umatlas     21508 Jun  3 12:05 stderr.txt
[2025-06-03 12:05:25] HITS file was successfully produced:
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas 176957047 Jun  3 12:04 shared/HITS.pool.root.1
[2025-06-03 12:05:25]  *** Contents of shared directory: ***
[2025-06-03 12:05:25] total 386028
[2025-06-03 12:05:25] -rw-r--r--. 2 boincer umatlas 216925419 Jun  3 10:31 ATLAS.root_0
[2025-06-03 12:05:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:31 start_atlas.sh
[2025-06-03 12:05:25] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 10:31 input.tar.gz
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas 176957047 Jun  3 12:04 HITS.pool.root.1
[2025-06-03 12:05:25] -rw-------. 1 boincer umatlas    870400 Jun  3 12:05 result.tar.gz
12:05:26 (1633936): run_atlas exited; CPU time 36323.477871
12:05:26 (1633936): called boinc_finish(0)

</stderr_txt>
]]>

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