Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:48:25 (29655): wrapper (7.7.26015): starting
01:48:25 (29655): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:48:25] Arguments: --nthreads 8
[2025-06-04 01:48:25] Threads: 8
[2025-06-04 01:48:25] Checking for CVMFS
[2025-06-04 01:48:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:48:26] 2.11.2.0 22848 32574 101680 146761 1 114 19515432 25165824 4389 130560 0 17383437 99.825 18034449 2522 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:48:26] CVMFS is ok
[2025-06-04 01:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:48:26] Checking for apptainer binary...
[2025-06-04 01:48:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:48:26] Running /usr/bin/apptainer --version
[2025-06-04 01:48:26] apptainer version 1.3.2-1.el7
[2025-06-04 01:48:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:48:27] cg-vwn482.simple-grid.lan
[2025-06-04 01:48:27] apptainer works
[2025-06-04 01:48:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:48:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:48:27] Starting ATLAS job with PandaID=6677621557
[2025-06-04 01:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 09:04:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 09:04:00] 2025-06-04 03:12:23,558 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6677621557/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,558 | INFO     | extracted standard info from prmon json
[2025-06-04 09:04:00] 2025-06-04 03:12:23,559 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 09:04:00] 2025-06-04 03:12:23,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 09:04:00] 2025-06-04 03:12:23,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 09:04:00] 2025-06-04 03:12:23,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 09:04:00] 2025-06-04 03:12:23,563 | INFO     | fitting pss+swap vs Time
[2025-06-04 09:04:00] 2025-06-04 03:12:23,564 | INFO     | sum of square deviations: 2406926989.5
[2025-06-04 09:04:00] 2025-06-04 03:12:23,565 | INFO     | sum of deviations: -16557038490.500004
[2025-06-04 09:04:00] 2025-06-04 03:12:23,565 | INFO     | mean x: 1749000585.5
[2025-06-04 09:04:00] 2025-06-04 03:12:23,566 | INFO     | mean y: 2489996.1363636362
[2025-06-04 09:04:00] 2025-06-04 03:12:23,566 | INFO     | -- intersect: 12033710776.973656
[2025-06-04 09:04:00] 2025-06-04 03:12:23,566 | INFO     | intersect: 12033710776.973656
[2025-06-04 09:04:00] 2025-06-04 03:12:23,566 | INFO     | chi2: 2.4593516672002678
[2025-06-04 09:04:00] 2025-06-04 03:12:23,566 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,568 | INFO     | sum of deviations: -3060080127.9999895
[2025-06-04 09:04:00] 2025-06-04 03:12:23,568 | INFO     | mean x: 1749000433.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,568 | INFO     | mean y: 2501344.9430051814
[2025-06-04 09:04:00] 2025-06-04 03:12:23,568 | INFO     | -- intersect: 2403456365.033972
[2025-06-04 09:04:00] 2025-06-04 03:12:23,568 | INFO     | intersect: 2403456365.033972
[2025-06-04 09:04:00] 2025-06-04 03:12:23,569 | INFO     | chi2: 1.6897332813182595
[2025-06-04 09:04:00] 2025-06-04 03:12:23,569 | INFO     | current chi2=1.6897332813182595 (change=31.293547651041862 %)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,569 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,570 | INFO     | sum of deviations: -2819264754.999999
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | mean x: 1749000280.5
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | mean y: 2501562.670212766
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | -- intersect: 2395740484.320291
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | intersect: 2395740484.320291
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | chi2: 1.689754136190109
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | current chi2=1.689754136190109 (change=-0.001234210871029922 %)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,571 | INFO     | right removable region: 187
[2025-06-04 09:04:00] 2025-06-04 03:12:23,572 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,573 | INFO     | sum of deviations: -46757916298.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,573 | INFO     | mean x: 1749000738.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,573 | INFO     | mean y: 2515607.1917098444
[2025-06-04 09:04:00] 2025-06-04 03:12:23,573 | INFO     | -- intersect: 36689029929.01862
[2025-06-04 09:04:00] 2025-06-04 03:12:23,573 | INFO     | intersect: 36689029929.01862
[2025-06-04 09:04:00] 2025-06-04 03:12:23,574 | INFO     | chi2: 0.979627266312373
[2025-06-04 09:04:00] 2025-06-04 03:12:23,574 | INFO     | current chi2=0.979627266312373 (change=60.167255485362006 %)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,574 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,575 | INFO     | sum of deviations: -44653638338.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,575 | INFO     | mean x: 1749000890.5
[2025-06-04 09:04:00] 2025-06-04 03:12:23,575 | INFO     | mean y: 2513658.0531914895
[2025-06-04 09:04:00] 2025-06-04 03:12:23,575 | INFO     | -- intersect: 37908447233.91632
[2025-06-04 09:04:00] 2025-06-04 03:12:23,576 | INFO     | intersect: 37908447233.91632
[2025-06-04 09:04:00] 2025-06-04 03:12:23,583 | INFO     | chi2: 0.9655158354515575
[2025-06-04 09:04:00] 2025-06-04 03:12:23,584 | INFO     | current chi2=0.9655158354515575 (change=1.4404898011807437 %)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,584 | INFO     | left removable region: 20
[2025-06-04 09:04:00] 2025-06-04 03:12:23,584 | INFO     | sum of square deviations: 1444149868.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,585 | INFO     | sum of deviations: -18747559867.000004
[2025-06-04 09:04:00] 2025-06-04 03:12:23,585 | INFO     | mean x: 1749000860.0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,585 | INFO     | mean y: 2514853.497005988
[2025-06-04 09:04:00] 2025-06-04 03:12:23,585 | INFO     | -- intersect: 22707567186.946716
[2025-06-04 09:04:00] 2025-06-04 03:12:23,586 | INFO     | intersect: 22707567186.946716
[2025-06-04 09:04:00] 2025-06-04 03:12:23,586 | INFO     | chi2: 0.13970501054544274
[2025-06-04 09:04:00] 2025-06-04 03:12:23,586 | INFO     | -- intersect: 22707567186.946716
[2025-06-04 09:04:00] 2025-06-04 03:12:23,586 | INFO     | current memory leak: -12.98 B/s (using 167 data points, chi2=0.14)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,587 | INFO     | ..............................
[2025-06-04 09:04:00] 2025-06-04 03:12:23,587 | INFO     | . Timing measurements:
[2025-06-04 09:04:00] 2025-06-04 03:12:23,587 | INFO     | . get job = 0 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,587 | INFO     | . initial setup = 2 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,587 | INFO     | . payload setup = 13 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,587 | INFO     | . stage-in = 0 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,588 | INFO     | . payload execution = 12082 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,588 | INFO     | . stage-out = 2 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,588 | INFO     | . log creation = 0 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,588 | INFO     | ..............................
[2025-06-04 09:04:00] 2025-06-04 03:12:23,738 | INFO     | 
[2025-06-04 09:04:00] 2025-06-04 03:12:23,738 | INFO     | job summary report
[2025-06-04 09:04:00] 2025-06-04 03:12:23,738 | INFO     | --------------------------------------------------
[2025-06-04 09:04:00] 2025-06-04 03:12:23,738 | INFO     | PanDA job id: 6677621557
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | task id: 45006595
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | errors: (none)
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | pilot state: finished 
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | transexitcode: 0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | exeerrorcode: 0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | exeerrordiag: 
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | exitcode: 0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | exitmsg: OK
[2025-06-04 09:04:00] 2025-06-04 03:12:23,739 | INFO     | cpuconsumptiontime: 44923 s
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | nevents: 400
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | neventsw: 0
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | pid: 9514
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | pgrp: 9514
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | corecount: 8
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | event service: False
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | sizes: {0: 2405013, 1: 2405212, 9: 2405418, 12: 2405446, 12100: 2434512, 12103: 2443453, 12104: 2443637, 12199: 2443807}
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | --------------------------------------------------
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | 
[2025-06-04 09:04:00] 2025-06-04 03:12:23,740 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 09:04:00] 2025-06-04 03:12:24,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 09:04:00] 2025-06-04 03:12:24,038 | INFO     | job 6677621557 has completed (purged errors)
[2025-06-04 09:04:00] 2025-06-04 03:12:24,038 | INFO     | overall cleanup function is called
[2025-06-04 09:04:00] 2025-06-04 03:12:25,048 | INFO     | --- collectZombieJob: --- 10, [9514]
[2025-06-04 09:04:00] 2025-06-04 03:12:25,048 | INFO     | zombie collector waiting for pid 9514
[2025-06-04 09:04:00] 2025-06-04 03:12:25,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 09:04:00] 2025-06-04 03:12:25,048 | INFO     | collected zombie processes
[2025-06-04 09:04:00] 2025-06-04 03:12:25,049 | INFO     | will attempt to kill all subprocesses of pid=9514
[2025-06-04 09:04:00] 2025-06-04 03:12:25,191 | INFO     | process IDs to be killed: [9514] (in reverse order)
[2025-06-04 09:04:00] 2025-06-04 03:12:25,866 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 09:04:00] 2025-06-04 03:12:25,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 09:04:00] 2025-06-04 03:12:25,870 | INFO     | did not find any defunct processes belonging to 9514
[2025-06-04 09:04:00] 2025-06-04 03:12:25,874 | INFO     | did not find any defunct processes belonging to 9514
[2025-06-04 09:04:00] 2025-06-04 03:12:25,874 | INFO     | ready for new job
[2025-06-04 09:04:00] 2025-06-04 03:12:25,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 09:04:00] 2025-06-04 03:12:25,876 | INFO     | **************************************
[2025-06-04 09:04:00] 2025-06-04 03:12:25,876 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 09:04:00] 2025-06-04 03:12:25,877 | INFO     | **************************************
[2025-06-04 09:04:00] 2025-06-04 03:12:25,877 | INFO     | 
[2025-06-04 09:04:00] 2025-06-04 03:12:25,877 | INFO     | pilot is running in a VM
[2025-06-04 09:04:00] 2025-06-04 03:12:25,877 | INFO     | architecture information:
[2025-06-04 09:04:00] 2025-06-04 03:12:25,897 | INFO     | executing command: cat /etc/os-release
[2025-06-04 09:04:00] 2025-06-04 03:12:26,066 | INFO     | cat /etc/os-release:
[2025-06-04 09:04:00] NAME="CentOS Linux"
[2025-06-04 09:04:00] VERSION="7 (Core)"
[2025-06-04 09:04:00] ID="centos"
[2025-06-04 09:04:00] ID_LIKE="rhel fedora"
[2025-06-04 09:04:00] VERSION_ID="7"
[2025-06-04 09:04:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 09:04:00] ANSI_COLOR="0;31"
[2025-06-04 09:04:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 09:04:00] HOME_URL="https://www.centos.org/"
[2025-06-04 09:04:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 09:04:00] 
[2025-06-04 09:04:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 09:04:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 09:04:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 09:04:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 09:04:00] 
[2025-06-04 09:04:00] 2025-06-04 03:12:26,066 | INFO     | **************************************
[2025-06-04 09:04:00] 2025-06-04 03:12:26,570 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-04 09:04:00] 2025-06-04 03:12:26,761 | INFO     | sufficient remaining disk space (496673751040 B)
[2025-06-04 09:04:00] 2025-06-04 03:12:26,761 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 09:04:00] 2025-06-04 03:12:26,761 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 09:04:00] 2025-06-04 03:12:26,761 | INFO     | update_server=False
[2025-06-04 09:04:00] 2025-06-04 03:12:26,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 09:04:00] 2025-06-04 03:12:26,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:04:00] 2025-06-04 03:12:26,762 | INFO     | aborting loop
[2025-06-04 09:04:00] 2025-06-04 03:12:27,154 | INFO     | all payload control threads have been joined
[2025-06-04 09:04:00] 2025-06-04 03:12:27,392 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 09:04:00] 2025-06-04 03:12:27,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 09:04:00] 2025-06-04 03:12:27,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 09:04:00] 2025-06-04 03:12:27,767 | INFO     | all data control threads have been joined
[2025-06-04 09:04:00] 2025-06-04 03:12:27,768 | INFO     | [job] job monitor thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:27,769 | INFO     | [job] retrieve thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:27,925 | INFO     | [payload] validate_post thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:27,981 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,065 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 09:04:00] 2025-06-04 03:12:28,160 | INFO     | [payload] control thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,248 | INFO     | all job control threads have been joined
[2025-06-04 09:04:00] 2025-06-04 03:12:28,334 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,373 | INFO     | [data] copytool_in thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,431 | INFO     | [job] validate thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 09:04:00] 2025-06-04 03:12:28,773 | INFO     | [data] control thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,782 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:28,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 09:04:00] 2025-06-04 03:12:29,253 | INFO     | [job] control thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:29,323 | INFO     | [payload] failed_post thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:29,755 | INFO     | [job] queue monitor thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:30,129 | INFO     | [data] copytool_out thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:32,807 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 09:04:00] 2025-06-04 03:12:32,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139922602264384)>', '<ExcThread(monitor, started 139922132408064)>']
[2025-06-04 09:04:00] 2025-06-04 03:12:33,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 09:04:00] 2025-06-04 03:12:33,428 | INFO     | [monitor] control thread has ended
[2025-06-04 09:04:00] 2025-06-04 03:12:37,908 | INFO     | all workflow threads have been joined
[2025-06-04 09:04:00] 2025-06-04 03:12:37,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 09:04:00] 2025-06-04 03:12:37,909 | INFO     | traces error code: 0
[2025-06-04 09:04:00] 2025-06-04 03:12:37,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 09:04:00] 2025-06-04 03:12:38,337 [wrapper] ==== pilot stdout END ====
[2025-06-04 09:04:00] 2025-06-04 03:12:38,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 09:04:00] 2025-06-04 03:12:38,426 [wrapper] pilotpid: 929
[2025-06-04 09:04:00] 2025-06-04 03:12:38,472 [wrapper] Pilot exit status: 0
[2025-06-04 09:04:00] 2025-06-04 03:12:38,767 [wrapper] pandaids: 6677621557
[2025-06-04 09:04:00] 2025-06-04 03:12:39,641 [wrapper] cleanup supervisor_pilot  4336 930
[2025-06-04 09:04:00] 2025-06-04 03:12:39,753 [wrapper] Test setup, not cleaning
[2025-06-04 09:04:00] 2025-06-04 03:12:39,849 [wrapper] apfmon messages muted
[2025-06-04 09:04:00] 2025-06-04 03:12:39,917 [wrapper] ==== wrapper stdout END ====
[2025-06-04 09:04:00] 2025-06-04 03:12:39,992 [wrapper] ==== wrapper stderr END ====
[2025-06-04 09:04:00]  *** Error codes and diagnostics ***
[2025-06-04 09:04:00]     "exeErrorCode": 0,
[2025-06-04 09:04:00]     "exeErrorDiag": "",
[2025-06-04 09:04:00]     "pilotErrorCode": 0,
[2025-06-04 09:04:00]     "pilotErrorDiag": "",
[2025-06-04 09:04:00]  *** Listing of results directory ***
[2025-06-04 09:04:00] total 394696
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc    495897 Jun  3 14:59 pilot3.tar.gz
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc      5111 Jun  3 15:16 queuedata.json
[2025-06-04 09:04:00] -rwx------. 1 boinc boinc     37140 Jun  3 15:17 runpilot2-wrapper.sh
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 09:04:00] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:48 run_atlas
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:48 job.xml
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc      6391 Jun  4 01:48 init_data.xml
[2025-06-04 09:04:00] -rw-r--r--. 2 boinc boinc 216558267 Jun  4 01:48 EVNT.45006593._001354.pool.root.1
[2025-06-04 09:04:00] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:48 start_atlas.sh
[2025-06-04 09:04:00] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:48 shared
[2025-06-04 09:04:00] -rw-r--r--. 2 boinc boinc    508876 Jun  4 01:48 input.tar.gz
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:48 boinc_lockfile
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc      2525 Jun  4 01:48 pandaJob.out
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc    986077 Jun  4 01:48 agis_schedconf.cvmfs.json
[2025-06-04 09:04:00] drwx------. 4 boinc boinc      4096 Jun  4 01:48 pilot3
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc 180902422 Jun  4 05:09 HITS.45006595._033663.pool.root.1
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:09 boinc_task_state.xml
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc      1020 Jun  4 05:10 memory_monitor_summary.json
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc   1603667 Jun  4 05:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc    380869 Jun  4 05:10 log.45006595._033663.job.log.tgz.1
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc        95 Jun  4 05:11 pilot_heartbeat.json
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc      7694 Jun  4 05:12 heartbeat.json
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc      4416 Jun  4 05:12 pilotlog.txt
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc   1061633 Jun  4 05:12 log.45006595._033663.job.log.1
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc       357 Jun  4 05:12 output.list
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:12 runtime_log
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc   1464320 Jun  4 05:12 result.tar.gz
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc       656 Jun  4 05:12 vAEODmChgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUKkKDmiL8Bam.diag
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:12 runtime_log.err
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc      8192 Jun  4 09:03 boinc_mmap_file
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc        28 Jun  4 09:03 wrapper_checkpoint.txt
[2025-06-04 09:04:00] -rw-r--r--. 1 boinc boinc     20481 Jun  4 09:04 stderr.txt
[2025-06-04 09:04:00] HITS file was successfully produced:
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc 180902422 Jun  4 05:09 shared/HITS.pool.root.1
[2025-06-04 09:04:00]  *** Contents of shared directory: ***
[2025-06-04 09:04:00] total 390096
[2025-06-04 09:04:00] -rw-r--r--. 2 boinc boinc 216558267 Jun  4 01:48 ATLAS.root_0
[2025-06-04 09:04:00] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:48 start_atlas.sh
[2025-06-04 09:04:00] -rw-r--r--. 2 boinc boinc    508876 Jun  4 01:48 input.tar.gz
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc 180902422 Jun  4 05:09 HITS.pool.root.1
[2025-06-04 09:04:00] -rw-------. 1 boinc boinc   1464320 Jun  4 05:12 result.tar.gz
09:04:02 (29655): run_atlas exited; CPU time 45065.780828
09:04:02 (29655): called boinc_finish(0)

</stderr_txt>
]]>

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