Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:24:51 (873): wrapper (7.7.26015): starting
10:24:51 (873): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:24:51] Arguments: --nthreads 8
[2025-06-03 10:24:51] Threads: 8
[2025-06-03 10:24:51] Checking for CVMFS
[2025-06-03 10:24:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:24:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:24:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:24:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:24:51] 2.11.2.0 2817 34358 76916 146744 1 56 12430837 20275200 1 130560 0 11152097 99.947 5991804 7514 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 10:24:51] CVMFS is ok
[2025-06-03 10:24:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:24:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:24:51] Further information can be found at the LHC@home message board.
[2025-06-03 10:24:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:24:51] Checking for apptainer binary...
[2025-06-03 10:24:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:24:51] Running /usr/bin/apptainer --version
[2025-06-03 10:24:52] apptainer version 1.3.2-1.el7
[2025-06-03 10:24:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:24:53] c-204-21.aglt2.org
[2025-06-03 10:24:53] apptainer works
[2025-06-03 10:24:53] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:24:53] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:24:53] Starting ATLAS job with PandaID=6677621501
[2025-06-03 10:24:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:13:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:13:44] 2025-06-03 16:13:29,487 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 12:13:44] 2025-06-03 16:13:29,488 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677621501/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,489 | INFO     | extracted standard info from prmon json
[2025-06-03 12:13:44] 2025-06-03 16:13:29,489 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:13:44] 2025-06-03 16:13:29,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:13:44] 2025-06-03 16:13:29,489 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:13:44] 2025-06-03 16:13:29,490 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:13:44] 2025-06-03 16:13:29,492 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:13:44] 2025-06-03 16:13:29,493 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,493 | INFO     | sum of deviations: 15752217758.000002
[2025-06-03 12:13:44] 2025-06-03 16:13:29,494 | INFO     | mean x: 1748963944.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,494 | INFO     | mean y: 2451317.6603773586
[2025-06-03 12:13:44] 2025-06-03 16:13:29,494 | INFO     | -- intersect: -74602078437.7378
[2025-06-03 12:13:44] 2025-06-03 16:13:29,494 | INFO     | intersect: -74602078437.7378
[2025-06-03 12:13:44] 2025-06-03 16:13:29,494 | INFO     | chi2: 1.5179947790759867
[2025-06-03 12:13:44] 2025-06-03 16:13:29,495 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,495 | INFO     | sum of deviations: 15029714848.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,495 | INFO     | mean x: 1748963792.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,496 | INFO     | mean y: 2449105.7227722774
[2025-06-03 12:13:44] 2025-06-03 16:13:29,496 | INFO     | -- intersect: -82284619263.14175
[2025-06-03 12:13:44] 2025-06-03 16:13:29,496 | INFO     | intersect: -82284619263.14175
[2025-06-03 12:13:44] 2025-06-03 16:13:29,496 | INFO     | chi2: 1.5199931675018203
[2025-06-03 12:13:44] 2025-06-03 16:13:29,496 | INFO     | current chi2=1.5199931675018203 (change=-0.13164659413717456 %)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,497 | INFO     | right removable region: 100
[2025-06-03 12:13:44] 2025-06-03 16:13:29,497 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,497 | INFO     | sum of deviations: -202296068.99999985
[2025-06-03 12:13:44] 2025-06-03 16:13:29,497 | INFO     | mean x: 1748964097.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,498 | INFO     | mean y: 2499087.3564356435
[2025-06-03 12:13:44] 2025-06-03 16:13:29,498 | INFO     | -- intersect: 1110061907.532669
[2025-06-03 12:13:44] 2025-06-03 16:13:29,498 | INFO     | intersect: 1110061907.532669
[2025-06-03 12:13:44] 2025-06-03 16:13:29,498 | INFO     | chi2: 0.029747187918681074
[2025-06-03 12:13:44] 2025-06-03 16:13:29,498 | INFO     | current chi2=0.029747187918681074 (change=98.04036296246103 %)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,499 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,499 | INFO     | sum of deviations: -1812929973.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,499 | INFO     | mean x: 1748964249.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,499 | INFO     | mean y: 2504371.84375
[2025-06-03 12:13:44] 2025-06-03 16:13:29,500 | INFO     | -- intersect: 11561416571.926205
[2025-06-03 12:13:44] 2025-06-03 16:13:29,500 | INFO     | intersect: 11561416571.926205
[2025-06-03 12:13:44] 2025-06-03 16:13:29,500 | INFO     | chi2: 0.0027020489568505535
[2025-06-03 12:13:44] 2025-06-03 16:13:29,500 | INFO     | current chi2=0.0027020489568505535 (change=90.91662390328439 %)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,500 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,501 | INFO     | sum of deviations: -1796556506.0000002
[2025-06-03 12:13:44] 2025-06-03 16:13:29,501 | INFO     | mean x: 1748964402.0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,501 | INFO     | mean y: 2504299.4615384615
[2025-06-03 12:13:44] 2025-06-03 16:13:29,501 | INFO     | -- intersect: 13450937753.349178
[2025-06-03 12:13:44] 2025-06-03 16:13:29,501 | INFO     | intersect: 13450937753.349178
[2025-06-03 12:13:44] 2025-06-03 16:13:29,502 | INFO     | chi2: 0.0023701742320815524
[2025-06-03 12:13:44] 2025-06-03 16:13:29,502 | INFO     | current chi2=0.0023701742320815524 (change=12.282335741089854 %)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,502 | INFO     | left removable region: 30
[2025-06-03 12:13:44] 2025-06-03 16:13:29,502 | INFO     | sum of square deviations: 106336877.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,502 | INFO     | sum of deviations: -1133576328.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,503 | INFO     | mean x: 1748964676.5
[2025-06-03 12:13:44] 2025-06-03 16:13:29,503 | INFO     | mean y: 2502012.4142857143
[2025-06-03 12:13:44] 2025-06-03 16:13:29,503 | INFO     | -- intersect: 18646880174.29007
[2025-06-03 12:13:44] 2025-06-03 16:13:29,503 | INFO     | intersect: 18646880174.29007
[2025-06-03 12:13:44] 2025-06-03 16:13:29,503 | INFO     | chi2: 0.002019041169903395
[2025-06-03 12:13:44] 2025-06-03 16:13:29,503 | INFO     | -- intersect: 18646880174.29007
[2025-06-03 12:13:44] 2025-06-03 16:13:29,504 | INFO     | current memory leak: -10.66 B/s (using 70 data points, chi2=0.00)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,504 | INFO     | ..............................
[2025-06-03 12:13:44] 2025-06-03 16:13:29,504 | INFO     | . Timing measurements:
[2025-06-03 12:13:44] 2025-06-03 16:13:29,504 | INFO     | . get job = 0 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | . initial setup = 3 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | . payload setup = 11 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | . stage-in = 0 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | . payload execution = 6458 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | . stage-out = 0 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | . log creation = 0 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,505 | INFO     | ..............................
[2025-06-03 12:13:44] 2025-06-03 16:13:29,915 | INFO     | 
[2025-06-03 12:13:44] 2025-06-03 16:13:29,915 | INFO     | job summary report
[2025-06-03 12:13:44] 2025-06-03 16:13:29,915 | INFO     | --------------------------------------------------
[2025-06-03 12:13:44] 2025-06-03 16:13:29,915 | INFO     | PanDA job id: 6677621501
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | task id: 45006595
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | errors: (none)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | pilot state: finished 
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | transexitcode: 0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | exeerrorcode: 0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | exeerrordiag: 
[2025-06-03 12:13:44] 2025-06-03 16:13:29,916 | INFO     | exitcode: 0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | exitmsg: OK
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | cpuconsumptiontime: 47422 s
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | nevents: 400
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | neventsw: 0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | pid: 11638
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | pgrp: 11638
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | corecount: 8
[2025-06-03 12:13:44] 2025-06-03 16:13:29,917 | INFO     | event service: False
[2025-06-03 12:13:44] 2025-06-03 16:13:29,918 | INFO     | sizes: {0: 2405184, 6: 2405390, 11: 2405418, 6472: 2432300, 6473: 2432299, 6475: 2441296, 6477: 2441480, 6484: 2441650}
[2025-06-03 12:13:44] 2025-06-03 16:13:29,918 | INFO     | --------------------------------------------------
[2025-06-03 12:13:44] 2025-06-03 16:13:29,918 | INFO     | 
[2025-06-03 12:13:44] 2025-06-03 16:13:29,918 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 12:13:44] 2025-06-03 16:13:29,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:13:44] 2025-06-03 16:13:29,937 | INFO     | job 6677621501 has completed (purged errors)
[2025-06-03 12:13:44] 2025-06-03 16:13:29,937 | INFO     | overall cleanup function is called
[2025-06-03 12:13:44] 2025-06-03 16:13:30,945 | INFO     | --- collectZombieJob: --- 10, [11638]
[2025-06-03 12:13:44] 2025-06-03 16:13:30,945 | INFO     | zombie collector waiting for pid 11638
[2025-06-03 12:13:44] 2025-06-03 16:13:30,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:13:44] 2025-06-03 16:13:30,946 | INFO     | collected zombie processes
[2025-06-03 12:13:44] 2025-06-03 16:13:30,946 | INFO     | will attempt to kill all subprocesses of pid=11638
[2025-06-03 12:13:44] 2025-06-03 16:13:31,054 | INFO     | process IDs to be killed: [11638] (in reverse order)
[2025-06-03 12:13:44] 2025-06-03 16:13:31,101 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:13:44] 2025-06-03 16:13:31,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:13:44] 2025-06-03 16:13:31,106 | INFO     | did not find any defunct processes belonging to 11638
[2025-06-03 12:13:44] 2025-06-03 16:13:31,111 | INFO     | did not find any defunct processes belonging to 11638
[2025-06-03 12:13:44] 2025-06-03 16:13:31,111 | INFO     | ready for new job
[2025-06-03 12:13:44] 2025-06-03 16:13:31,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:13:44] 2025-06-03 16:13:31,114 | INFO     | **************************************
[2025-06-03 12:13:44] 2025-06-03 16:13:31,115 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:13:44] 2025-06-03 16:13:31,115 | INFO     | **************************************
[2025-06-03 12:13:44] 2025-06-03 16:13:31,115 | INFO     | 
[2025-06-03 12:13:44] 2025-06-03 16:13:31,115 | INFO     | architecture information:
[2025-06-03 12:13:44] 2025-06-03 16:13:31,116 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:13:44] 2025-06-03 16:13:31,131 | INFO     | cat /etc/os-release:
[2025-06-03 12:13:44] NAME="CentOS Linux"
[2025-06-03 12:13:44] VERSION="7 (Core)"
[2025-06-03 12:13:44] ID="centos"
[2025-06-03 12:13:44] ID_LIKE="rhel fedora"
[2025-06-03 12:13:44] VERSION_ID="7"
[2025-06-03 12:13:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:13:44] ANSI_COLOR="0;31"
[2025-06-03 12:13:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:13:44] HOME_URL="https://www.centos.org/"
[2025-06-03 12:13:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:13:44] 
[2025-06-03 12:13:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:13:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:13:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:13:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:13:44] 
[2025-06-03 12:13:44] 2025-06-03 16:13:31,132 | INFO     | **************************************
[2025-06-03 12:13:44] 2025-06-03 16:13:31,635 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 12:13:44] 2025-06-03 16:13:31,654 | INFO     | sufficient remaining disk space (18610126848 B)
[2025-06-03 12:13:44] 2025-06-03 16:13:31,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:13:44] 2025-06-03 16:13:31,655 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:13:44] 2025-06-03 16:13:31,655 | INFO     | update_server=False
[2025-06-03 12:13:44] 2025-06-03 16:13:31,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:13:44] 2025-06-03 16:13:31,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:13:44] 2025-06-03 16:13:31,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:13:44] 2025-06-03 16:13:31,657 | INFO     | aborting loop
[2025-06-03 12:13:44] 2025-06-03 16:13:31,903 | INFO     | all payload control threads have been joined
[2025-06-03 12:13:44] 2025-06-03 16:13:32,078 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:13:44] 2025-06-03 16:13:32,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:13:44] 2025-06-03 16:13:32,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:13:44] 2025-06-03 16:13:32,485 | INFO     | all data control threads have been joined
[2025-06-03 12:13:44] 2025-06-03 16:13:32,660 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:32,663 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:32,891 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:32,903 | INFO     | [payload] control thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,019 | INFO     | all job control threads have been joined
[2025-06-03 12:13:44] 2025-06-03 16:13:33,125 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,318 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,349 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,488 | INFO     | [data] control thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,663 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,739 | INFO     | [job] validate thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,770 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:33,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:13:44] 2025-06-03 16:13:33,910 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:34,021 | INFO     | [job] control thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:34,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:13:44] 2025-06-03 16:13:35,624 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:37,814 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:13:44] 2025-06-03 16:13:38,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125373187904)>', '<ExcThread(monitor, started 140124608243456)>']
[2025-06-03 12:13:44] 2025-06-03 16:13:39,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:13:44] 2025-06-03 16:13:39,105 | INFO     | [monitor] control thread has ended
[2025-06-03 12:13:44] 2025-06-03 16:13:43,898 | INFO     | all workflow threads have been joined
[2025-06-03 12:13:44] 2025-06-03 16:13:43,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:13:44] 2025-06-03 16:13:43,898 | INFO     | traces error code: 0
[2025-06-03 12:13:44] 2025-06-03 16:13:43,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:13:44] 2025-06-03 16:13:44,006 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:13:44] 2025-06-03 16:13:44,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:13:44] 2025-06-03 16:13:44,012 [wrapper] pilotpid: 5203
[2025-06-03 12:13:44] 2025-06-03 16:13:44,015 [wrapper] Pilot exit status: 0
[2025-06-03 12:13:44] 2025-06-03 16:13:44,024 [wrapper] pandaids: 6677621501
[2025-06-03 12:13:44] 2025-06-03 16:13:44,054 [wrapper] cleanup supervisor_pilot  3910 5204
[2025-06-03 12:13:44] 2025-06-03 16:13:44,058 [wrapper] Test setup, not cleaning
[2025-06-03 12:13:44] 2025-06-03 16:13:44,062 [wrapper] apfmon messages muted
[2025-06-03 12:13:44] 2025-06-03 16:13:44,066 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:13:44] 2025-06-03 16:13:44,071 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:13:44]  *** Error codes and diagnostics ***
[2025-06-03 12:13:44]     "exeErrorCode": 0,
[2025-06-03 12:13:44]     "exeErrorDiag": "",
[2025-06-03 12:13:44]     "pilotErrorCode": 0,
[2025-06-03 12:13:44]     "pilotErrorDiag": "",
[2025-06-03 12:13:44]  *** Listing of results directory ***
[2025-06-03 12:13:44] total 385292
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 09:16 queuedata.json
[2025-06-03 12:13:44] -rwx------ 1 boincer umatlas     37140 Jun  3 09:17 runpilot2-wrapper.sh
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas       100 Jun  3 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:13:44] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 10:24 run_atlas
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas       105 Jun  3 10:24 job.xml
[2025-06-03 12:13:44] -rw-r--r-- 2 boincer umatlas 216774173 Jun  3 10:24 EVNT.45006593._001352.pool.root.1
[2025-06-03 12:13:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:24 start_atlas.sh
[2025-06-03 12:13:44] drwxrwx--x 2 boincer umatlas      4096 Jun  3 10:24 shared
[2025-06-03 12:13:44] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 10:24 input.tar.gz
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas         0 Jun  3 10:24 boinc_lockfile
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 10:24 pandaJob.out
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas    982724 Jun  3 10:25 agis_schedconf.cvmfs.json
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas   1603667 Jun  3 10:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:13:44] drwx------ 4 boincer umatlas      4096 Jun  3 10:25 pilot3
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas        95 Jun  3 12:12 pilot_heartbeat.json
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas       529 Jun  3 12:12 boinc_task_state.xml
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas 172085822 Jun  3 12:12 HITS.45006595._033607.pool.root.1
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas      5904 Jun  3 12:12 init_data.xml
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas      1056 Jun  3 12:13 memory_monitor_summary.json
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas        27 Jun  3 12:13 wrapper_checkpoint.txt
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 12:13 boinc_mmap_file
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas    325466 Jun  3 12:13 log.45006595._033607.job.log.tgz.1
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas      7755 Jun  3 12:13 heartbeat.json
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas      4353 Jun  3 12:13 pilotlog.txt
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas    600011 Jun  3 12:13 log.45006595._033607.job.log.1
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas       357 Jun  3 12:13 output.list
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas       620 Jun  3 12:13 runtime_log
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas    942080 Jun  3 12:13 result.tar.gz
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 12:13 runtime_log.err
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas       660 Jun  3 12:13 lWoMDmChgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjJkKDmwueg6n.diag
[2025-06-03 12:13:44] -rw-r--r-- 1 boincer umatlas     20784 Jun  3 12:13 stderr.txt
[2025-06-03 12:13:44] HITS file was successfully produced:
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas 172085822 Jun  3 12:12 shared/HITS.pool.root.1
[2025-06-03 12:13:44]  *** Contents of shared directory: ***
[2025-06-03 12:13:44] total 381192
[2025-06-03 12:13:44] -rw-r--r-- 2 boincer umatlas 216774173 Jun  3 10:24 ATLAS.root_0
[2025-06-03 12:13:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:24 start_atlas.sh
[2025-06-03 12:13:44] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 10:24 input.tar.gz
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas 172085822 Jun  3 12:12 HITS.pool.root.1
[2025-06-03 12:13:44] -rw------- 1 boincer umatlas    942080 Jun  3 12:13 result.tar.gz
12:13:46 (873): run_atlas exited; CPU time 47376.679381
12:13:46 (873): called boinc_finish(0)

</stderr_txt>
]]>

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