Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:48:51 (2881310): wrapper (7.7.26015): starting
10:48:51 (2881310): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 10:48:51] Arguments: --nthreads 4
[2025-06-05 10:48:51] Threads: 4
[2025-06-05 10:48:51] Checking for CVMFS
[2025-06-05 10:48:51] No cvmfs_config command found, will try listing directly
[2025-06-05 10:48:51] CVMFS is ok
[2025-06-05 10:48:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:48:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:48:51] Further information can be found at the LHC@home message board.
[2025-06-05 10:48:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:48:51] Checking for apptainer binary...
[2025-06-05 10:48:51] which: no apptainer in ((null))
[2025-06-05 10:48:51] apptainer is not installed, using version from CVMFS
[2025-06-05 10:48:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:48:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-05 10:48:52] apptainer works
[2025-06-05 10:48:52] Set ATHENA_PROC_NUMBER=4
[2025-06-05 10:48:52] Set ATHENA_CORE_NUMBER=4
[2025-06-05 10:48:52] Starting ATLAS job with PandaID=6677599839
[2025-06-05 10:48:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:32:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:32:04] 2025-06-05 11:28:35,730 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677599839/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,731 | INFO     | extracted standard info from prmon json
[2025-06-05 13:32:04] 2025-06-05 11:28:35,731 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:32:04] 2025-06-05 11:28:35,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:32:04] 2025-06-05 11:28:35,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:32:04] 2025-06-05 11:28:35,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:32:04] 2025-06-05 11:28:35,735 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:32:04] 2025-06-05 11:28:35,735 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,736 | INFO     | sum of deviations: 11550803535.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,736 | INFO     | mean x: 1749118128.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,736 | INFO     | mean y: 2283058.4012738853
[2025-06-05 13:32:04] 2025-06-05 11:28:35,736 | INFO     | -- intersect: -16834983066.454296
[2025-06-05 13:32:04] 2025-06-05 11:28:35,736 | INFO     | intersect: -16834983066.454296
[2025-06-05 13:32:04] 2025-06-05 11:28:35,737 | INFO     | chi2: 2.560640685808263
[2025-06-05 13:32:04] 2025-06-05 11:28:35,737 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,738 | INFO     | sum of deviations: 20869351598.000008
[2025-06-05 13:32:04] 2025-06-05 11:28:35,738 | INFO     | mean x: 1749117975.5
[2025-06-05 13:32:04] 2025-06-05 11:28:35,738 | INFO     | mean y: 2295507.947368421
[2025-06-05 13:32:04] 2025-06-05 11:28:35,738 | INFO     | -- intersect: -33520302479.51588
[2025-06-05 13:32:04] 2025-06-05 11:28:35,738 | INFO     | intersect: -33520302479.51588
[2025-06-05 13:32:04] 2025-06-05 11:28:35,738 | INFO     | chi2: 1.757084674508868
[2025-06-05 13:32:04] 2025-06-05 11:28:35,739 | INFO     | current chi2=1.757084674508868 (change=31.381053021336086 %)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,739 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | sum of deviations: 20154693105.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | mean x: 1749117823.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | mean y: 2294459.074829932
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | -- intersect: -35789619668.50933
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | intersect: -35789619668.50933
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | chi2: 1.7592749098351341
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | current chi2=1.7592749098351341 (change=-0.12465166636766495 %)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,740 | INFO     | right removable region: 146
[2025-06-05 13:32:04] 2025-06-05 11:28:35,741 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,741 | INFO     | sum of deviations: -14698276197.5
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | mean x: 1749118280.5
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | mean y: 2318700.2697368423
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | -- intersect: 23612275515.73883
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | intersect: 23612275515.73883
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | chi2: 0.8549995093841034
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | current chi2=0.8549995093841034 (change=66.6099381251445 %)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,742 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,743 | INFO     | sum of deviations: -14227379652.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,743 | INFO     | mean x: 1749118433.0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,743 | INFO     | mean y: 2317981.285714286
[2025-06-05 13:32:04] 2025-06-05 11:28:35,743 | INFO     | -- intersect: 25268161807.478973
[2025-06-05 13:32:04] 2025-06-05 11:28:35,743 | INFO     | intersect: 25268161807.478973
[2025-06-05 13:32:04] 2025-06-05 11:28:35,744 | INFO     | chi2: 0.852591959302421
[2025-06-05 13:32:04] 2025-06-05 11:28:35,744 | INFO     | current chi2=0.852591959302421 (change=0.2815849664541487 %)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,744 | INFO     | left removable region: 20
[2025-06-05 13:32:04] 2025-06-05 11:28:35,744 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | sum of deviations: -2190086019.4999995
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | mean x: 1749118402.5
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | mean y: 2328263.8492063493
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | -- intersect: 6178476040.752674
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | intersect: 6178476040.752674
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | chi2: 0.011207190479454985
[2025-06-05 13:32:04] 2025-06-05 11:28:35,745 | INFO     | -- intersect: 6178476040.752674
[2025-06-05 13:32:04] 2025-06-05 11:28:35,746 | INFO     | current memory leak: -3.53 B/s (using 126 data points, chi2=0.01)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,746 | INFO     | ..............................
[2025-06-05 13:32:04] 2025-06-05 11:28:35,746 | INFO     | . Timing measurements:
[2025-06-05 13:32:04] 2025-06-05 11:28:35,746 | INFO     | . get job = 0 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,746 | INFO     | . initial setup = 1 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,746 | INFO     | . payload setup = 7 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,747 | INFO     | . stage-in = 0 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,747 | INFO     | . payload execution = 9539 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,747 | INFO     | . stage-out = 0 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,747 | INFO     | . log creation = 0 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,747 | INFO     | ..............................
[2025-06-05 13:32:04] 2025-06-05 11:28:35,938 | INFO     | 
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | job summary report
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | --------------------------------------------------
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | PanDA job id: 6677599839
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | task id: 45006595
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | errors: (none)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | pilot state: finished 
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | transexitcode: 0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | exeerrorcode: 0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | exeerrordiag: 
[2025-06-05 13:32:04] 2025-06-05 11:28:35,939 | INFO     | exitcode: 0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | exitmsg: OK
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | cpuconsumptiontime: 36587 s
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | nevents: 400
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | neventsw: 0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | pid: 2892009
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | pgrp: 2892009
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | corecount: 4
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | event service: False
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | sizes: {0: 2397126, 1: 2397381, 5: 2397587, 12: 2397643, 9550: 2425820, 9553: 2434967, 9558: 2435081}
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | --------------------------------------------------
[2025-06-05 13:32:04] 2025-06-05 11:28:35,940 | INFO     | 
[2025-06-05 13:32:04] 2025-06-05 11:28:35,941 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-05 13:32:04] 2025-06-05 11:28:35,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,964 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:32:04] 2025-06-05 11:28:35,964 | INFO     | job 6677599839 has completed (purged errors)
[2025-06-05 13:32:04] 2025-06-05 11:28:35,964 | INFO     | overall cleanup function is called
[2025-06-05 13:32:04] 2025-06-05 11:28:36,968 | INFO     | --- collectZombieJob: --- 10, [2892009]
[2025-06-05 13:32:04] 2025-06-05 11:28:36,968 | INFO     | zombie collector waiting for pid 2892009
[2025-06-05 13:32:04] 2025-06-05 11:28:36,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:32:04] 2025-06-05 11:28:36,968 | INFO     | collected zombie processes
[2025-06-05 13:32:04] 2025-06-05 11:28:36,968 | INFO     | will attempt to kill all subprocesses of pid=2892009
[2025-06-05 13:32:04] 2025-06-05 11:28:37,315 | INFO     | process IDs to be killed: [2892009] (in reverse order)
[2025-06-05 13:32:04] 2025-06-05 11:28:37,419 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:32:04] 2025-06-05 11:28:37,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:32:04] 2025-06-05 11:28:37,430 | INFO     | did not find any defunct processes belonging to 2892009
[2025-06-05 13:32:04] 2025-06-05 11:28:37,441 | INFO     | did not find any defunct processes belonging to 2892009
[2025-06-05 13:32:04] 2025-06-05 11:28:37,442 | INFO     | ready for new job
[2025-06-05 13:32:04] 2025-06-05 11:28:37,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:32:04] 2025-06-05 11:28:37,444 | INFO     | **************************************
[2025-06-05 13:32:04] 2025-06-05 11:28:37,444 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:32:04] 2025-06-05 11:28:37,444 | INFO     | **************************************
[2025-06-05 13:32:04] 2025-06-05 11:28:37,444 | INFO     | 
[2025-06-05 13:32:04] 2025-06-05 11:28:37,449 | INFO     | architecture information:
[2025-06-05 13:32:04] 2025-06-05 11:28:37,449 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:32:04] 2025-06-05 11:28:37,465 | INFO     | cat /etc/os-release:
[2025-06-05 13:32:04] NAME="CentOS Linux"
[2025-06-05 13:32:04] VERSION="7 (Core)"
[2025-06-05 13:32:04] ID="centos"
[2025-06-05 13:32:04] ID_LIKE="rhel fedora"
[2025-06-05 13:32:04] VERSION_ID="7"
[2025-06-05 13:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:32:04] ANSI_COLOR="0;31"
[2025-06-05 13:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:32:04] HOME_URL="https://www.centos.org/"
[2025-06-05 13:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:32:04] 
[2025-06-05 13:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:32:04] 
[2025-06-05 13:32:04] 2025-06-05 11:28:37,465 | INFO     | **************************************
[2025-06-05 13:32:04] 2025-06-05 11:28:37,968 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-05 13:32:04] 2025-06-05 11:28:37,984 | INFO     | sufficient remaining disk space (662492413952 B)
[2025-06-05 13:32:04] 2025-06-05 11:28:37,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:32:04] 2025-06-05 11:28:37,984 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:32:04] 2025-06-05 11:28:37,984 | INFO     | update_server=False
[2025-06-05 13:32:04] 2025-06-05 11:28:37,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:32:04] 2025-06-05 11:28:37,985 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 13:32:04] 2025-06-05 11:28:37,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:32:04] 2025-06-05 11:28:37,986 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:32:04] 2025-06-05 11:28:37,986 | INFO     | aborting loop
[2025-06-05 13:32:04] 2025-06-05 11:28:37,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:32:04] 2025-06-05 11:28:37,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:32:04] 2025-06-05 11:28:38,580 | INFO     | all payload control threads have been joined
[2025-06-05 13:32:04] 2025-06-05 11:28:38,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:32:04] 2025-06-05 11:28:38,682 | INFO     | all data control threads have been joined
[2025-06-05 13:32:04] 2025-06-05 11:28:38,695 | INFO     | all job control threads have been joined
[2025-06-05 13:32:04] 2025-06-05 11:28:38,990 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:38,991 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,142 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,169 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,552 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,586 | INFO     | [payload] control thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,654 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,688 | INFO     | [data] control thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,700 | INFO     | [job] control thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:39,717 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:40,007 | INFO     | [job] validate thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:40,336 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:40,564 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:40,621 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:40,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:32:04] 2025-06-05 11:28:41,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:32:04] 2025-06-05 11:28:41,857 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:45,211 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:32:04] 2025-06-05 11:28:46,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22418235385664)>', '<ExcThread(monitor, started 22418001204992)>']
[2025-06-05 13:32:04] 2025-06-05 11:28:47,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:32:04] 2025-06-05 11:28:47,019 | INFO     | [monitor] control thread has ended
[2025-06-05 13:32:04] 2025-06-05 11:28:51,247 | INFO     | all workflow threads have been joined
[2025-06-05 13:32:04] 2025-06-05 11:28:51,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:32:04] 2025-06-05 11:28:51,248 | INFO     | traces error code: 0
[2025-06-05 13:32:04] 2025-06-05 11:28:51,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:32:04] 2025-06-05 11:28:51,431 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:32:04] 2025-06-05 11:28:51,434 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:32:04] 2025-06-05 11:28:51,436 [wrapper] pilotpid: 2885001
[2025-06-05 13:32:04] 2025-06-05 11:28:51,439 [wrapper] Pilot exit status: 0
[2025-06-05 13:32:04] 2025-06-05 11:28:51,449 [wrapper] pandaids: 6677599839
[2025-06-05 13:32:04] 2025-06-05 11:28:51,519 [wrapper] cleanup supervisor_pilot 3153691 2885002
[2025-06-05 13:32:04] 2025-06-05 11:28:51,522 [wrapper] Test setup, not cleaning
[2025-06-05 13:32:04] 2025-06-05 11:28:51,524 [wrapper] apfmon messages muted
[2025-06-05 13:32:04] 2025-06-05 11:28:51,527 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:32:04] 2025-06-05 11:28:51,530 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:32:04]  *** Error codes and diagnostics ***
[2025-06-05 13:32:04]     "exeErrorCode": 0,
[2025-06-05 13:32:04]     "exeErrorDiag": "",
[2025-06-05 13:32:04]     "pilotErrorCode": 0,
[2025-06-05 13:32:04]     "pilotErrorDiag": "",
[2025-06-05 13:32:04]  *** Listing of results directory ***
[2025-06-05 13:32:04] total 390364
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc      5111 Jun  3 13:34 queuedata.json
[2025-06-05 13:32:04] -rwx------ 1 boinc boinc     37140 Jun  3 13:35 runpilot2-wrapper.sh
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:32:04] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:48 run_atlas
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:48 job.xml
[2025-06-05 13:32:04] -rw-r--r-- 2 boinc boinc 216951143 Jun  5 10:48 EVNT.45006593._001240.pool.root.1
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc      6633 Jun  5 10:48 init_data.xml
[2025-06-05 13:32:04] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:48 start_atlas.sh
[2025-06-05 13:32:04] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:48 shared
[2025-06-05 13:32:04] -rw-r--r-- 2 boinc boinc    508880 Jun  5 10:48 input.tar.gz
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:48 boinc_lockfile
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc      2525 Jun  5 10:48 pandaJob.out
[2025-06-05 13:32:04] -rw------- 1 boinc boinc    983281 Jun  5 10:49 agis_schedconf.cvmfs.json
[2025-06-05 13:32:04] -rw------- 1 boinc boinc   1598969 Jun  5 10:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:32:04] drwx------ 4 boinc boinc      4096 Jun  5 10:49 pilot3
[2025-06-05 13:32:04] -rw------- 1 boinc boinc        95 Jun  5 13:27 pilot_heartbeat.json
[2025-06-05 13:32:04] -rw------- 1 boinc boinc 176533243 Jun  5 13:27 HITS.45006595._030925.pool.root.1
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc       528 Jun  5 13:27 boinc_task_state.xml
[2025-06-05 13:32:04] -rw------- 1 boinc boinc      1036 Jun  5 13:28 memory_monitor_summary.json
[2025-06-05 13:32:04] -rw------- 1 boinc boinc    300809 Jun  5 13:28 log.45006595._030925.job.log.tgz.1
[2025-06-05 13:32:04] -rw------- 1 boinc boinc      7722 Jun  5 13:28 heartbeat.json
[2025-06-05 13:32:04] -rw------- 1 boinc boinc      4486 Jun  5 13:28 pilotlog.txt
[2025-06-05 13:32:04] -rw------- 1 boinc boinc    905266 Jun  5 13:28 log.45006595._030925.job.log.1
[2025-06-05 13:32:04] -rw------- 1 boinc boinc       357 Jun  5 13:28 output.list
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:28 runtime_log
[2025-06-05 13:32:04] -rw------- 1 boinc boinc   1228800 Jun  5 13:28 result.tar.gz
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc      9025 Jun  5 13:28 runtime_log.err
[2025-06-05 13:32:04] -rw------- 1 boinc boinc       662 Jun  5 13:28 Gt1LDmJ6eg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpojKDmhstSdm.diag
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc        26 Jun  5 13:31 wrapper_checkpoint.txt
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:32 boinc_mmap_file
[2025-06-05 13:32:04] -rw-r--r-- 1 boinc boinc     20625 Jun  5 13:32 stderr.txt
[2025-06-05 13:32:04] HITS file was successfully produced:
[2025-06-05 13:32:04] -rw------- 1 boinc boinc 176533243 Jun  5 13:27 shared/HITS.pool.root.1
[2025-06-05 13:32:04]  *** Contents of shared directory: ***
[2025-06-05 13:32:04] total 385988
[2025-06-05 13:32:04] -rw-r--r-- 2 boinc boinc 216951143 Jun  5 10:48 ATLAS.root_0
[2025-06-05 13:32:04] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:48 start_atlas.sh
[2025-06-05 13:32:04] -rw-r--r-- 2 boinc boinc    508880 Jun  5 10:48 input.tar.gz
[2025-06-05 13:32:04] -rw------- 1 boinc boinc 176533243 Jun  5 13:27 HITS.pool.root.1
[2025-06-05 13:32:04] -rw------- 1 boinc boinc   1228800 Jun  5 13:28 result.tar.gz
13:32:06 (2881310): run_atlas exited; CPU time 36954.677502
13:32:06 (2881310): called boinc_finish(0)

</stderr_txt>
]]>

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