Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:47 (18657): wrapper (7.7.26015): starting
10:23:47 (18657): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:23:47] Arguments: --nthreads 8
[2025-06-03 10:23:47] Threads: 8
[2025-06-03 10:23:47] Checking for CVMFS
[2025-06-03 10:23:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:23:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:23:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:23:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:23:47] 2.11.3.0 9048 0 33144 146744 3 18 17524316 21133312 179 130560 0 22874 98.835 82217 66250 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 10:23:47] CVMFS is ok
[2025-06-03 10:23:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:23:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:23:47] Further information can be found at the LHC@home message board.
[2025-06-03 10:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:23:47] Checking for apptainer binary...
[2025-06-03 10:23:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:23:47] Running /usr/bin/apptainer --version
[2025-06-03 10:23:48] apptainer version 1.3.3-1.el9
[2025-06-03 10:23:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:23:48] c-8-38.aglt2.org
[2025-06-03 10:23:48] apptainer works
[2025-06-03 10:23:48] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:23:48] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:23:48] Starting ATLAS job with PandaID=6677577360
[2025-06-03 10:23:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:55:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:55:01]  filetype=log
[2025-06-03 11:55:01]  guid=4293c4fb-e20a-4e26-81df-e73e64f4faf1
[2025-06-03 11:55:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 11:55:01]  is_altstaged=None
[2025-06-03 11:55:01]  is_tar=False
[2025-06-03 11:55:01]  lfn=log.45006595._029157.job.log.tgz.1
[2025-06-03 11:55:01]  mtime=0
[2025-06-03 11:55:01]  protocol_id=None
[2025-06-03 11:55:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:55:01]  replicas=None
[2025-06-03 11:55:01]  scope=mc23_13p6TeV
[2025-06-03 11:55:01]  status=None
[2025-06-03 11:55:01]  status_code=0
[2025-06-03 11:55:01]  storage_token=
[2025-06-03 11:55:01]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677577360/log.45006595._029157.job.log.tgz.1
[2025-06-03 11:55:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/fa/log.45006595._029157.job.log.tgz.1
[2025-06-03 11:55:01]  workdir=None
[2025-06-03 11:55:01] ]
[2025-06-03 11:55:01] 2025-06-03 15:54:36,856 | INFO     | transferring file log.45006595._029157.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677577360/log.45006595._029157.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:55:01] 2025-06-03 15:54:36,856 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677577360/log.45006595._029157.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._029157.job
[2025-06-03 11:55:01] 2025-06-03 15:54:36,867 | INFO     | adding to output.list: log.45006595._029157.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/fa/log.45006595._029157.job.log.tg
[2025-06-03 11:55:01] 2025-06-03 15:54:36,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:55:01] 2025-06-03 15:54:36,868 | INFO     | summary of transferred files:
[2025-06-03 11:55:01] 2025-06-03 15:54:36,868 | INFO     |  -- lfn=log.45006595._029157.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:55:01] 2025-06-03 15:54:36,868 | INFO     | stage-out finished correctly
[2025-06-03 11:55:01] 2025-06-03 15:54:38,359 | INFO     | monitor loop #402: job 0:6677577360 is in state 'finished'
[2025-06-03 11:55:01] 2025-06-03 15:54:38,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:55:01] 2025-06-03 15:54:39,216 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:55:01] 2025-06-03 15:54:39,269 | INFO     | job 6677577360 has state=finished
[2025-06-03 11:55:01] 2025-06-03 15:54:39,270 | INFO     | preparing for final server update for job 6677577360 in state='finished'
[2025-06-03 11:55:01] 2025-06-03 15:54:39,322 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 11:55:01] 2025-06-03 15:54:39,322 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:55:01] 2025-06-03 15:54:39,322 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:55:01] 2025-06-03 15:54:39,322 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:55:01] 2025-06-03 15:54:39,322 | INFO     | job 6677577360 has finished - writing final server update
[2025-06-03 11:55:01] 2025-06-03 15:54:39,323 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:55:01] 2025-06-03 15:54:39,336 | INFO     | executing command: lscpu
[2025-06-03 11:55:01] 2025-06-03 15:54:39,374 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:55:01] 2025-06-03 15:54:40,861 | INFO     | monitor loop #403: job 0:6677577360 is in state 'finished'
[2025-06-03 11:55:01] 2025-06-03 15:54:40,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:55:01] 2025-06-03 15:54:41,605 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 11:55:01] 2025-06-03 15:54:41,605 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677577360/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:55:01] 2025-06-03 15:54:41,606 | INFO     | extracted standard info from prmon json
[2025-06-03 11:55:01] 2025-06-03 15:54:41,606 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:55:01] 2025-06-03 15:54:41,606 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:55:01] 2025-06-03 15:54:41,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:55:01] 2025-06-03 15:54:41,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:55:01] 2025-06-03 15:54:41,607 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:55:01] 2025-06-03 15:54:41,607 | INFO     | sum of square deviations: 170944600.5
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | sum of deviations: -200875012.99999994
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | mean x: 1748963429.5
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | mean y: 2136161.1219512196
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | -- intersect: 2057322757.3042448
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | intersect: 2057322757.3042448
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | chi2: 0.03833823485416266
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | -- intersect: 2057322757.3042448
[2025-06-03 11:55:01] 2025-06-03 15:54:41,608 | INFO     | current memory leak: -1.18 B/s (using 82 data points, chi2=0.04)
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | ..............................
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . Timing measurements:
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . get job = 0 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . initial setup = 2 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . payload setup = 3 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . stage-in = 0 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . payload execution = 5420 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . stage-out = 0 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | . log creation = 0 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,609 | INFO     | ..............................
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | 
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | job summary report
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | --------------------------------------------------
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | PanDA job id: 6677577360
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | task id: 45006595
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | errors: (none)
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:55:01] 2025-06-03 15:54:41,815 | INFO     | pilot state: finished 
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | transexitcode: 0
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | exeerrorcode: 0
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | exeerrordiag: 
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | exitcode: 0
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | exitmsg: OK
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | cpuconsumptiontime: 39963 s
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | nevents: 400
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | neventsw: 0
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | pid: 57962
[2025-06-03 11:55:01] 2025-06-03 15:54:41,816 | INFO     | pgrp: 57962
[2025-06-03 11:55:01] 2025-06-03 15:54:41,817 | INFO     | corecount: 8
[2025-06-03 11:55:01] 2025-06-03 15:54:41,817 | INFO     | event service: False
[2025-06-03 11:55:01] 2025-06-03 15:54:41,817 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 5427: 2431873, 5429: 2440814, 5431: 2440870, 5434: 2441168}
[2025-06-03 11:55:01] 2025-06-03 15:54:41,817 | INFO     | --------------------------------------------------
[2025-06-03 11:55:01] 2025-06-03 15:54:41,817 | INFO     | 
[2025-06-03 11:55:01] 2025-06-03 15:54:41,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | job 6677577360 has completed (purged errors)
[2025-06-03 11:55:01] 2025-06-03 15:54:41,830 | INFO     | overall cleanup function is called
[2025-06-03 11:55:01] 2025-06-03 15:54:42,837 | INFO     | --- collectZombieJob: --- 10, [57962]
[2025-06-03 11:55:01] 2025-06-03 15:54:42,837 | INFO     | zombie collector waiting for pid 57962
[2025-06-03 11:55:01] 2025-06-03 15:54:42,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:55:01] 2025-06-03 15:54:42,837 | INFO     | collected zombie processes
[2025-06-03 11:55:01] 2025-06-03 15:54:42,838 | INFO     | will attempt to kill all subprocesses of pid=57962
[2025-06-03 11:55:01] 2025-06-03 15:54:42,947 | INFO     | process IDs to be killed: [57962] (in reverse order)
[2025-06-03 11:55:01] 2025-06-03 15:54:42,978 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:55:01] 2025-06-03 15:54:42,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:55:01] 2025-06-03 15:54:42,981 | INFO     | did not find any defunct processes belonging to 57962
[2025-06-03 11:55:01] 2025-06-03 15:54:42,984 | INFO     | did not find any defunct processes belonging to 57962
[2025-06-03 11:55:01] 2025-06-03 15:54:42,984 | INFO     | ready for new job
[2025-06-03 11:55:01] 2025-06-03 15:54:42,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:55:01] 2025-06-03 15:54:42,985 | INFO     | **************************************
[2025-06-03 11:55:01] 2025-06-03 15:54:42,985 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:55:01] 2025-06-03 15:54:42,985 | INFO     | **************************************
[2025-06-03 11:55:01] 2025-06-03 15:54:42,985 | INFO     | 
[2025-06-03 11:55:01] 2025-06-03 15:54:42,999 | INFO     | architecture information:
[2025-06-03 11:55:01] 2025-06-03 15:54:42,999 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:55:01] 2025-06-03 15:54:43,005 | INFO     | cat /etc/os-release:
[2025-06-03 11:55:01] NAME="CentOS Linux"
[2025-06-03 11:55:01] VERSION="7 (Core)"
[2025-06-03 11:55:01] ID="centos"
[2025-06-03 11:55:01] ID_LIKE="rhel fedora"
[2025-06-03 11:55:01] VERSION_ID="7"
[2025-06-03 11:55:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:55:01] ANSI_COLOR="0;31"
[2025-06-03 11:55:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:55:01] HOME_URL="https://www.centos.org/"
[2025-06-03 11:55:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:55:01] 
[2025-06-03 11:55:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:55:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:55:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:55:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:55:01] 
[2025-06-03 11:55:01] 2025-06-03 15:54:43,006 | INFO     | **************************************
[2025-06-03 11:55:01] 2025-06-03 15:54:43,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 11:55:01] 2025-06-03 15:54:43,519 | INFO     | sufficient remaining disk space (94836359168 B)
[2025-06-03 11:55:01] 2025-06-03 15:54:43,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:55:01] 2025-06-03 15:54:43,519 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:55:01] 2025-06-03 15:54:43,519 | INFO     | update_server=False
[2025-06-03 11:55:01] 2025-06-03 15:54:43,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:55:01] 2025-06-03 15:54:43,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:55:01] 2025-06-03 15:54:43,746 | INFO     | all payload control threads have been joined
[2025-06-03 11:55:01] 2025-06-03 15:54:43,840 | INFO     | all data control threads have been joined
[2025-06-03 11:55:01] 2025-06-03 15:54:44,071 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:55:01] 2025-06-03 15:54:44,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:55:01] 2025-06-03 15:54:44,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:55:01] 2025-06-03 15:54:44,370 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:55:01] 2025-06-03 15:54:44,370 | INFO     | aborting loop
[2025-06-03 11:55:01] 2025-06-03 15:54:44,525 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:44,525 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:44,751 | INFO     | [payload] control thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:44,846 | INFO     | [data] control thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:44,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:55:01] 2025-06-03 15:54:44,975 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,014 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,110 | INFO     | all job control threads have been joined
[2025-06-03 11:55:01] 2025-06-03 15:54:45,274 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:55:01] 2025-06-03 15:54:45,375 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,641 | INFO     | [job] validate thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,642 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,642 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,667 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:45,879 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:46,116 | INFO     | [job] control thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:46,937 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:49,280 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:54,395 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:55:01] 2025-06-03 15:54:55,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:55:01] 2025-06-03 15:54:55,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958574180160)>', '<ExcThread(monitor, started 139957800785664)>']
[2025-06-03 11:55:01] 2025-06-03 15:54:56,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:55:01] 2025-06-03 15:54:56,130 | INFO     | [monitor] control thread has ended
[2025-06-03 11:55:01] 2025-06-03 15:55:01,018 | INFO     | all workflow threads have been joined
[2025-06-03 11:55:01] 2025-06-03 15:55:01,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:55:01] 2025-06-03 15:55:01,018 | INFO     | traces error code: 0
[2025-06-03 11:55:01] 2025-06-03 15:55:01,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:55:01] 2025-06-03 15:55:01,081 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:55:01] 2025-06-03 15:55:01,082 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:55:01] 2025-06-03 15:55:01,084 [wrapper] pilotpid: 25252
[2025-06-03 11:55:01] 2025-06-03 15:55:01,085 [wrapper] Pilot exit status: 0
[2025-06-03 11:55:01] 2025-06-03 15:55:01,091 [wrapper] pandaids: 6677577360
[2025-06-03 11:55:01] 2025-06-03 15:55:01,112 [wrapper] cleanup supervisor_pilot  275667 25254
[2025-06-03 11:55:01] 2025-06-03 15:55:01,114 [wrapper] Test setup, not cleaning
[2025-06-03 11:55:01] 2025-06-03 15:55:01,115 [wrapper] apfmon messages muted
[2025-06-03 11:55:01] 2025-06-03 15:55:01,117 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:55:01] 2025-06-03 15:55:01,118 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:55:01]  *** Error codes and diagnostics ***
[2025-06-03 11:55:01]     "exeErrorCode": 0,
[2025-06-03 11:55:01]     "exeErrorDiag": "",
[2025-06-03 11:55:01]     "pilotErrorCode": 0,
[2025-06-03 11:55:01]     "pilotErrorDiag": "",
[2025-06-03 11:55:01]  *** Listing of results directory ***
[2025-06-03 11:55:01] total 386520
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:30 pilot3.tar.gz
[2025-06-03 11:55:01] -rwx------. 1 boincer umatlas     37140 Jun  3 06:37 runpilot2-wrapper.sh
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 06:37 queuedata.json
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas       100 Jun  3 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:55:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 10:23 run_atlas
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas       105 Jun  3 10:23 job.xml
[2025-06-03 11:55:01] -rw-r--r--. 2 boincer umatlas 218226049 Jun  3 10:23 EVNT.45006593._001166.pool.root.1
[2025-06-03 11:55:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:23 start_atlas.sh
[2025-06-03 11:55:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 10:23 shared
[2025-06-03 11:55:01] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 10:23 input.tar.gz
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas         0 Jun  3 10:23 boinc_lockfile
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 10:23 pandaJob.out
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas    982724 Jun  3 10:23 agis_schedconf.cvmfs.json
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas   1603667 Jun  3 10:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:55:01] drwx------. 4 boincer umatlas      4096 Jun  3 10:23 pilot3
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas 172074698 Jun  3 11:54 HITS.45006595._029157.pool.root.1
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas       529 Jun  3 11:54 boinc_task_state.xml
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas      6654 Jun  3 11:54 init_data.xml
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas      1028 Jun  3 11:54 memory_monitor_summary.json
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas    306802 Jun  3 11:54 log.45006595._029157.job.log.tgz.1
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas        95 Jun  3 11:54 pilot_heartbeat.json
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas      7700 Jun  3 11:54 heartbeat.json
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:54 boinc_mmap_file
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:54 wrapper_checkpoint.txt
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas      4425 Jun  3 11:55 pilotlog.txt
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas    526212 Jun  3 11:55 log.45006595._029157.job.log.1
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas       357 Jun  3 11:55 output.list
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:55 runtime_log
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas    849920 Jun  3 11:55 result.tar.gz
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 11:55 runtime_log.err
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas       650 Jun  3 11:55 i50LDmTCeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAKYKDmq8pdVo.diag
[2025-06-03 11:55:01] -rw-r--r--. 1 boincer umatlas     21144 Jun  3 11:55 stderr.txt
[2025-06-03 11:55:01] HITS file was successfully produced:
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas 172074698 Jun  3 11:54 shared/HITS.pool.root.1
[2025-06-03 11:55:01]  *** Contents of shared directory: ***
[2025-06-03 11:55:01] total 382512
[2025-06-03 11:55:01] -rw-r--r--. 2 boincer umatlas 218226049 Jun  3 10:23 ATLAS.root_0
[2025-06-03 11:55:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:23 start_atlas.sh
[2025-06-03 11:55:01] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 10:23 input.tar.gz
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas 172074698 Jun  3 11:54 HITS.pool.root.1
[2025-06-03 11:55:01] -rw-------. 1 boincer umatlas    849920 Jun  3 11:55 result.tar.gz
11:55:02 (18657): run_atlas exited; CPU time 40030.806317
11:55:02 (18657): called boinc_finish(0)

</stderr_txt>
]]>

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