Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:33:36 (30222): wrapper (7.7.26015): starting
23:33:36 (30222): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:33:36] Arguments: --nthreads 8
[2025-06-03 23:33:36] Threads: 8
[2025-06-03 23:33:36] Checking for CVMFS
[2025-06-03 23:33:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:33:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:33:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:33:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:33:38] 2.11.2.0 14868 32440 101608 146755 3 60 15864424 25165825 4274 130560 0 16597224 99.757 20653218 2602 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 23:33:38] CVMFS is ok
[2025-06-03 23:33:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:33:38] Checking for apptainer binary...
[2025-06-03 23:33:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:33:38] Running /usr/bin/apptainer --version
[2025-06-03 23:33:38] apptainer version 1.3.2-1.el7
[2025-06-03 23:33:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:33:49] cg-vwn478.simple-grid.lan
[2025-06-03 23:33:49] apptainer works
[2025-06-03 23:33:50] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:33:50] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:33:50] Starting ATLAS job with PandaID=6677577280
[2025-06-03 23:33:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:06:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:06:09] 2025-06-04 01:04:46,124 | INFO     | extracted standard info from prmon json
[2025-06-04 03:06:09] 2025-06-04 01:04:46,124 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:06:09] 2025-06-04 01:04:46,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:06:09] 2025-06-04 01:04:46,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:06:09] 2025-06-04 01:04:46,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:06:09] 2025-06-04 01:04:46,129 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:06:09] 2025-06-04 01:04:46,130 | INFO     | sum of square deviations: 2299168690.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,131 | INFO     | sum of deviations: 84274660593.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,131 | INFO     | mean x: 1748993060.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,131 | INFO     | mean y: 2398202.815384615
[2025-06-04 03:06:09] 2025-06-04 01:04:46,131 | INFO     | -- intersect: -64105901963.28182
[2025-06-04 03:06:09] 2025-06-04 01:04:46,131 | INFO     | intersect: -64105901963.28182
[2025-06-04 03:06:09] 2025-06-04 01:04:46,132 | INFO     | chi2: 6.25133975277698
[2025-06-04 03:06:09] 2025-06-04 01:04:46,132 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,133 | INFO     | sum of deviations: 94407380383.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,133 | INFO     | mean x: 1748992907.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,133 | INFO     | mean y: 2406930.805263158
[2025-06-04 03:06:09] 2025-06-04 01:04:46,133 | INFO     | -- intersect: -77634245133.62334
[2025-06-04 03:06:09] 2025-06-04 01:04:46,134 | INFO     | intersect: -77634245133.62334
[2025-06-04 03:06:09] 2025-06-04 01:04:46,134 | INFO     | chi2: 5.536027524684265
[2025-06-04 03:06:09] 2025-06-04 01:04:46,134 | INFO     | current chi2=5.536027524684265 (change=11.442542820920238 %)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,134 | INFO     | right removable region: 189
[2025-06-04 03:06:09] 2025-06-04 01:04:46,134 | INFO     | sum of square deviations: 2126802667.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | sum of deviations: 18579750209.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | mean x: 1748993212.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | mean y: 2456259.484210526
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | -- intersect: -15276750176.5715
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | intersect: -15276750176.5715
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | chi2: 1.57189029768501
[2025-06-04 03:06:09] 2025-06-04 01:04:46,136 | INFO     | current chi2=1.57189029768501 (change=74.85514529926579 %)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,137 | INFO     | sum of square deviations: 1963274020.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,138 | INFO     | sum of deviations: -4644661634.000006
[2025-06-04 03:06:09] 2025-06-04 01:04:46,138 | INFO     | mean x: 1748993365.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,138 | INFO     | mean y: 2477713.2162162163
[2025-06-04 03:06:09] 2025-06-04 01:04:46,138 | INFO     | -- intersect: 4140199853.774093
[2025-06-04 03:06:09] 2025-06-04 01:04:46,138 | INFO     | intersect: 4140199853.774093
[2025-06-04 03:06:09] 2025-06-04 01:04:46,138 | INFO     | chi2: 0.8023790154326231
[2025-06-04 03:06:09] 2025-06-04 01:04:46,139 | INFO     | current chi2=0.8023790154326231 (change=48.954515679986 %)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,139 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,140 | INFO     | sum of deviations: -5131227188.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,140 | INFO     | mean x: 1748993517.5
[2025-06-04 03:06:09] 2025-06-04 01:04:46,140 | INFO     | mean y: 2478206.5166666666
[2025-06-04 03:06:09] 2025-06-04 01:04:46,140 | INFO     | -- intersect: 4965279750.127121
[2025-06-04 03:06:09] 2025-06-04 01:04:46,140 | INFO     | intersect: 4965279750.127121
[2025-06-04 03:06:09] 2025-06-04 01:04:46,141 | INFO     | chi2: 0.7941983558321127
[2025-06-04 03:06:09] 2025-06-04 01:04:46,141 | INFO     | current chi2=0.7941983558321127 (change=1.0195505419716873 %)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,141 | INFO     | left removable region: 30
[2025-06-04 03:06:09] 2025-06-04 01:04:46,141 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,145 | INFO     | sum of deviations: 3598135874.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | mean x: 1748993792.0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | mean y: 2493061.817610063
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | -- intersect: -5046598069.295796
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | intersect: -5046598069.295796
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | chi2: 0.0005932552629746019
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | -- intersect: -5046598069.295796
[2025-06-04 03:06:09] 2025-06-04 01:04:46,146 | INFO     | current memory leak: 2.89 B/s (using 159 data points, chi2=0.00)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,147 | INFO     | ..............................
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . Timing measurements:
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . get job = 0 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . initial setup = 7 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . payload setup = 175 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . stage-in = 0 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . payload execution = 12001 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . stage-out = 4 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | . log creation = 1 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,148 | INFO     | ..............................
[2025-06-04 03:06:09] 2025-06-04 01:04:46,283 | INFO     | 
[2025-06-04 03:06:09] 2025-06-04 01:04:46,283 | INFO     | job summary report
[2025-06-04 03:06:09] 2025-06-04 01:04:46,283 | INFO     | --------------------------------------------------
[2025-06-04 03:06:09] 2025-06-04 01:04:46,283 | INFO     | PanDA job id: 6677577280
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | task id: 45006595
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | errors: (none)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | pilot state: finished 
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | transexitcode: 0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | exeerrorcode: 0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | exeerrordiag: 
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | exitcode: 0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | exitmsg: OK
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | cpuconsumptiontime: 44122 s
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | nevents: 400
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | neventsw: 0
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | pid: 9077
[2025-06-04 03:06:09] 2025-06-04 01:04:46,284 | INFO     | pgrp: 9077
[2025-06-04 03:06:09] 2025-06-04 01:04:46,285 | INFO     | corecount: 8
[2025-06-04 03:06:09] 2025-06-04 01:04:46,285 | INFO     | event service: False
[2025-06-04 03:06:09] 2025-06-04 01:04:46,285 | INFO     | sizes: {0: 2404955, 1: 2405039, 2: 2405238, 12: 2405238, 23: 2405266, 34: 2405294, 45: 2405450, 55: 2405478, 66: 2405506, 77: 2405534, 88: 2405590, 90: 2406104, 98
[2025-06-04 03:06:09] 2025-06-04 01:04:46,285 | INFO     | --------------------------------------------------
[2025-06-04 03:06:09] 2025-06-04 01:04:46,285 | INFO     | 
[2025-06-04 03:06:09] 2025-06-04 01:04:46,285 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 03:06:09] 2025-06-04 01:04:46,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:06:09] 2025-06-04 01:04:46,667 | INFO     | job 6677577280 has completed (purged errors)
[2025-06-04 03:06:09] 2025-06-04 01:04:46,667 | INFO     | overall cleanup function is called
[2025-06-04 03:06:09] 2025-06-04 01:04:47,675 | INFO     | --- collectZombieJob: --- 10, [9077]
[2025-06-04 03:06:09] 2025-06-04 01:04:47,676 | INFO     | zombie collector waiting for pid 9077
[2025-06-04 03:06:09] 2025-06-04 01:04:47,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:06:09] 2025-06-04 01:04:47,676 | INFO     | collected zombie processes
[2025-06-04 03:06:09] 2025-06-04 01:04:47,676 | INFO     | will attempt to kill all subprocesses of pid=9077
[2025-06-04 03:06:09] 2025-06-04 01:04:47,785 | INFO     | process IDs to be killed: [9077] (in reverse order)
[2025-06-04 03:06:09] 2025-06-04 01:04:48,077 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:06:09] 2025-06-04 01:04:48,077 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:06:09] 2025-06-04 01:04:48,081 | INFO     | did not find any defunct processes belonging to 9077
[2025-06-04 03:06:09] 2025-06-04 01:04:48,098 | INFO     | did not find any defunct processes belonging to 9077
[2025-06-04 03:06:09] 2025-06-04 01:04:48,099 | INFO     | ready for new job
[2025-06-04 03:06:09] 2025-06-04 01:04:48,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:06:09] 2025-06-04 01:04:48,101 | INFO     | **************************************
[2025-06-04 03:06:09] 2025-06-04 01:04:48,101 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:06:09] 2025-06-04 01:04:48,101 | INFO     | **************************************
[2025-06-04 03:06:09] 2025-06-04 01:04:48,101 | INFO     | 
[2025-06-04 03:06:09] 2025-06-04 01:04:48,102 | INFO     | pilot is running in a VM
[2025-06-04 03:06:09] 2025-06-04 01:04:48,102 | INFO     | architecture information:
[2025-06-04 03:06:09] 2025-06-04 01:04:48,108 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:06:09] 2025-06-04 01:04:48,280 | INFO     | cat /etc/os-release:
[2025-06-04 03:06:09] NAME="CentOS Linux"
[2025-06-04 03:06:09] VERSION="7 (Core)"
[2025-06-04 03:06:09] ID="centos"
[2025-06-04 03:06:09] ID_LIKE="rhel fedora"
[2025-06-04 03:06:09] VERSION_ID="7"
[2025-06-04 03:06:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:06:09] ANSI_COLOR="0;31"
[2025-06-04 03:06:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:06:09] HOME_URL="https://www.centos.org/"
[2025-06-04 03:06:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:06:09] 
[2025-06-04 03:06:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:06:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:06:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:06:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:06:09] 
[2025-06-04 03:06:09] 2025-06-04 01:04:48,280 | INFO     | **************************************
[2025-06-04 03:06:09] 2025-06-04 01:04:48,784 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 03:06:09] 2025-06-04 01:04:48,830 | INFO     | sufficient remaining disk space (496625516544 B)
[2025-06-04 03:06:09] 2025-06-04 01:04:48,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:06:09] 2025-06-04 01:04:48,831 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:06:09] 2025-06-04 01:04:48,831 | INFO     | update_server=False
[2025-06-04 03:06:09] 2025-06-04 01:04:48,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:06:09] 2025-06-04 01:04:48,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:06:09] 2025-06-04 01:04:48,832 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:06:09] 2025-06-04 01:04:48,833 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:06:09] 2025-06-04 01:04:48,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:06:09] 2025-06-04 01:04:48,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:06:09] 2025-06-04 01:04:48,936 | INFO     | all job control threads have been joined
[2025-06-04 03:06:09] 2025-06-04 01:04:49,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:06:09] 2025-06-04 01:04:49,073 | INFO     | aborting loop
[2025-06-04 03:06:09] 2025-06-04 01:04:49,347 | INFO     | all payload control threads have been joined
[2025-06-04 03:06:09] 2025-06-04 01:04:49,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:06:09] 2025-06-04 01:04:49,819 | INFO     | all data control threads have been joined
[2025-06-04 03:06:09] 2025-06-04 01:04:49,837 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:49,943 | INFO     | [job] control thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,078 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,174 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,220 | INFO     | [job] validate thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,354 | INFO     | [payload] control thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,480 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,503 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,635 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:50,825 | INFO     | [data] control thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:51,206 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:51,290 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:51,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:06:09] 2025-06-04 01:04:51,386 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:52,304 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:52,841 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:06:09] 2025-06-04 01:04:53,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513527834432)>', '<ExcThread(monitor, started 140512849807104)>']
[2025-06-04 03:06:09] 2025-06-04 01:04:53,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:06:09] 2025-06-04 01:04:53,866 | INFO     | [monitor] control thread has ended
[2025-06-04 03:06:09] 2025-06-04 01:04:58,730 | INFO     | all workflow threads have been joined
[2025-06-04 03:06:09] 2025-06-04 01:04:58,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:06:09] 2025-06-04 01:04:58,730 | INFO     | traces error code: 0
[2025-06-04 03:06:09] 2025-06-04 01:04:58,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:06:09] 2025-06-04 01:04:59,038 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:06:09] 2025-06-04 01:04:59,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:06:09] 2025-06-04 01:04:59,166 [wrapper] pilotpid: 2466
[2025-06-04 03:06:09] 2025-06-04 01:04:59,260 [wrapper] Pilot exit status: 0
[2025-06-04 03:06:09] 2025-06-04 01:04:59,631 [wrapper] pandaids: 6677577280
[2025-06-04 03:06:09] 2025-06-04 01:05:00,410 [wrapper] cleanup supervisor_pilot   677 2467
[2025-06-04 03:06:09] 2025-06-04 01:05:00,462 [wrapper] Test setup, not cleaning
[2025-06-04 03:06:09] 2025-06-04 01:05:00,531 [wrapper] apfmon messages muted
[2025-06-04 03:06:09] 2025-06-04 01:05:00,600 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:06:09] 2025-06-04 01:05:00,657 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:06:09]  *** Error codes and diagnostics ***
[2025-06-04 03:06:09]     "exeErrorCode": 0,
[2025-06-04 03:06:09]     "exeErrorDiag": "",
[2025-06-04 03:06:09]     "pilotErrorCode": 0,
[2025-06-04 03:06:09]     "pilotErrorDiag": "",
[2025-06-04 03:06:09]  *** Listing of results directory ***
[2025-06-04 03:06:09] total 393116
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:30 pilot3.tar.gz
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:33 queuedata.json
[2025-06-04 03:06:09] -rwx------. 1 boinc boinc     37140 Jun  3 12:34 runpilot2-wrapper.sh
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:06:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:33 run_atlas
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:33 job.xml
[2025-06-04 03:06:09] -rw-r--r--. 2 boinc boinc 215547964 Jun  3 23:33 EVNT.45006593._001163.pool.root.1
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc      6392 Jun  3 23:33 init_data.xml
[2025-06-04 03:06:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:33 start_atlas.sh
[2025-06-04 03:06:09] drwxrwx--x. 2 boinc boinc        68 Jun  3 23:33 shared
[2025-06-04 03:06:09] -rw-r--r--. 2 boinc boinc    508882 Jun  3 23:33 input.tar.gz
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:33 boinc_lockfile
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc      2524 Jun  3 23:33 pandaJob.out
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc    986853 Jun  3 23:37 agis_schedconf.cvmfs.json
[2025-06-04 03:06:09] drwx------. 4 boinc boinc      4096 Jun  3 23:37 pilot3
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc 180331022 Jun  4 03:01 HITS.45006595._029077.pool.root.1
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc       531 Jun  4 03:02 boinc_task_state.xml
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc      1013 Jun  4 03:03 memory_monitor_summary.json
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc   1603667 Jun  4 03:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc    358028 Jun  4 03:03 log.45006595._029077.job.log.tgz.1
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc        95 Jun  4 03:03 pilot_heartbeat.json
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc      7685 Jun  4 03:04 heartbeat.json
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc      4539 Jun  4 03:04 pilotlog.txt
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc   1065206 Jun  4 03:05 log.45006595._029077.job.log.1
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc       357 Jun  4 03:05 output.list
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 03:05 runtime_log
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc   1443840 Jun  4 03:05 result.tar.gz
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc      8659 Jun  4 03:05 runtime_log.err
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc       656 Jun  4 03:05 7hVMDmX9dg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZVjKDmq1rcfm.diag
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 03:06 boinc_mmap_file
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc        28 Jun  4 03:06 wrapper_checkpoint.txt
[2025-06-04 03:06:09] -rw-r--r--. 1 boinc boinc     20417 Jun  4 03:06 stderr.txt
[2025-06-04 03:06:09] HITS file was successfully produced:
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc 180331022 Jun  4 03:01 shared/HITS.pool.root.1
[2025-06-04 03:06:09]  *** Contents of shared directory: ***
[2025-06-04 03:06:09] total 388536
[2025-06-04 03:06:09] -rw-r--r--. 2 boinc boinc 215547964 Jun  3 23:33 ATLAS.root_0
[2025-06-04 03:06:09] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:33 start_atlas.sh
[2025-06-04 03:06:09] -rw-r--r--. 2 boinc boinc    508882 Jun  3 23:33 input.tar.gz
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc 180331022 Jun  4 03:01 HITS.pool.root.1
[2025-06-04 03:06:09] -rw-------. 1 boinc boinc   1443840 Jun  4 03:05 result.tar.gz
03:06:11 (30222): run_atlas exited; CPU time 44283.875169
03:06:11 (30222): called boinc_finish(0)

</stderr_txt>
]]>

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