Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:20:39 (1348378): wrapper (7.7.26015): starting
10:20:39 (1348378): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:20:39] Arguments: --nthreads 8
[2025-06-03 10:20:39] Threads: 8
[2025-06-03 10:20:39] Checking for CVMFS
[2025-06-03 10:20:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:20:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:20:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:20:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:20:40] 2.12.6.0 3485378 178515 468064 146744 0 196 30201500 32503809 5082 130560 2 372933471 99.651 380886236 25431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 10:20:40] CVMFS is ok
[2025-06-03 10:20:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:20:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:20:40] Further information can be found at the LHC@home message board.
[2025-06-03 10:20:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:20:40] Checking for apptainer binary...
[2025-06-03 10:20:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:20:40] Running /usr/bin/apptainer --version
[2025-06-03 10:20:40] apptainer version 1.4.1-1.el9
[2025-06-03 10:20:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:20:40] c-4-35.aglt2.org
[2025-06-03 10:20:40] apptainer works
[2025-06-03 10:20:40] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:20:40] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:20:40] Starting ATLAS job with PandaID=6677577366
[2025-06-03 10:20:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:05:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:05:54] 2025-06-03 16:05:34,156 | INFO     | extracted standard info from prmon json
[2025-06-03 12:05:54] 2025-06-03 16:05:34,156 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:05:54] 2025-06-03 16:05:34,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:05:54] 2025-06-03 16:05:34,156 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:05:54] 2025-06-03 16:05:34,156 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:05:54] 2025-06-03 16:05:34,159 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:05:54] 2025-06-03 16:05:34,159 | INFO     | sum of square deviations: 338804492.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,160 | INFO     | sum of deviations: 26487250053.999996
[2025-06-03 12:05:54] 2025-06-03 16:05:34,160 | INFO     | mean x: 1748963585.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,160 | INFO     | mean y: 2020998.3980582524
[2025-06-03 12:05:54] 2025-06-03 16:05:34,161 | INFO     | -- intersect: -136729447754.48755
[2025-06-03 12:05:54] 2025-06-03 16:05:34,161 | INFO     | intersect: -136729447754.48755
[2025-06-03 12:05:54] 2025-06-03 16:05:34,161 | INFO     | chi2: 4.4891047518009115
[2025-06-03 12:05:54] 2025-06-03 16:05:34,161 | INFO     | sum of square deviations: 291817564.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,162 | INFO     | sum of deviations: 31803517509.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,162 | INFO     | mean x: 1748963432.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,162 | INFO     | mean y: 2037453.193877551
[2025-06-03 12:05:54] 2025-06-03 16:05:34,162 | INFO     | -- intersect: -190607425155.0412
[2025-06-03 12:05:54] 2025-06-03 16:05:34,162 | INFO     | intersect: -190607425155.0412
[2025-06-03 12:05:54] 2025-06-03 16:05:34,163 | INFO     | chi2: 3.610608238218425
[2025-06-03 12:05:54] 2025-06-03 16:05:34,163 | INFO     | current chi2=3.610608238218425 (change=19.56952582204852 %)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,163 | INFO     | right removable region: 97
[2025-06-03 12:05:54] 2025-06-03 16:05:34,163 | INFO     | sum of square deviations: 291817564.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,164 | INFO     | sum of deviations: 6602766605.499999
[2025-06-03 12:05:54] 2025-06-03 16:05:34,164 | INFO     | mean x: 1748963737.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,164 | INFO     | mean y: 2085138.1326530613
[2025-06-03 12:05:54] 2025-06-03 16:05:34,164 | INFO     | -- intersect: -39570582052.0065
[2025-06-03 12:05:54] 2025-06-03 16:05:34,164 | INFO     | intersect: -39570582052.0065
[2025-06-03 12:05:54] 2025-06-03 16:05:34,164 | INFO     | chi2: 2.179141512823135
[2025-06-03 12:05:54] 2025-06-03 16:05:34,165 | INFO     | current chi2=2.179141512823135 (change=51.45710262276859 %)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,165 | INFO     | sum of square deviations: 249388862.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,165 | INFO     | sum of deviations: -7743245267.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,166 | INFO     | mean x: 1748963890.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,166 | INFO     | mean y: 2136401.3333333335
[2025-06-03 12:05:54] 2025-06-03 16:05:34,166 | INFO     | -- intersect: 54305509273.68082
[2025-06-03 12:05:54] 2025-06-03 16:05:34,166 | INFO     | intersect: 54305509273.68082
[2025-06-03 12:05:54] 2025-06-03 16:05:34,166 | INFO     | chi2: 0.978889305822342
[2025-06-03 12:05:54] 2025-06-03 16:05:34,166 | INFO     | current chi2=0.978889305822342 (change=55.07913093013563 %)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,167 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,167 | INFO     | sum of deviations: -9405984761.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,167 | INFO     | mean x: 1748964042.5
[2025-06-03 12:05:54] 2025-06-03 16:05:34,167 | INFO     | mean y: 2142760.125
[2025-06-03 12:05:54] 2025-06-03 16:05:34,167 | INFO     | -- intersect: 77862213901.89067
[2025-06-03 12:05:54] 2025-06-03 16:05:34,168 | INFO     | intersect: 77862213901.89067
[2025-06-03 12:05:54] 2025-06-03 16:05:34,168 | INFO     | chi2: 0.910584005323413
[2025-06-03 12:05:54] 2025-06-03 16:05:34,168 | INFO     | current chi2=0.910584005323413 (change=6.9778370335292745 %)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,168 | INFO     | left removable region: 30
[2025-06-03 12:05:54] 2025-06-03 16:05:34,168 | INFO     | sum of square deviations: 93240818.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,169 | INFO     | sum of deviations: -1892522377.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,169 | INFO     | mean x: 1748964317.0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,169 | INFO     | mean y: 2163787.8656716417
[2025-06-03 12:05:54] 2025-06-03 16:05:34,169 | INFO     | -- intersect: 35501145644.6853
[2025-06-03 12:05:54] 2025-06-03 16:05:34,169 | INFO     | intersect: 35501145644.6853
[2025-06-03 12:05:54] 2025-06-03 16:05:34,169 | INFO     | chi2: 0.017581464862073036
[2025-06-03 12:05:54] 2025-06-03 16:05:34,170 | INFO     | -- intersect: 35501145644.6853
[2025-06-03 12:05:54] 2025-06-03 16:05:34,170 | INFO     | current memory leak: -20.30 B/s (using 67 data points, chi2=0.02)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,170 | INFO     | ..............................
[2025-06-03 12:05:54] 2025-06-03 16:05:34,170 | INFO     | . Timing measurements:
[2025-06-03 12:05:54] 2025-06-03 16:05:34,170 | INFO     | . get job = 0 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | . initial setup = 2 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | . payload setup = 5 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | . stage-in = 0 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | . payload execution = 6252 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | . stage-out = 0 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | . log creation = 0 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,171 | INFO     | ..............................
[2025-06-03 12:05:54] 2025-06-03 16:05:34,279 | INFO     | 
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | job summary report
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | --------------------------------------------------
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | PanDA job id: 6677577366
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | task id: 45006595
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | errors: (none)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | pilot state: finished 
[2025-06-03 12:05:54] 2025-06-03 16:05:34,280 | INFO     | transexitcode: 0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | exeerrorcode: 0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | exeerrordiag: 
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | exitcode: 0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | exitmsg: OK
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | cpuconsumptiontime: 40544 s
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | nevents: 400
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | neventsw: 0
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | pid: 1359044
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | pgrp: 1359044
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | corecount: 8
[2025-06-03 12:05:54] 2025-06-03 16:05:34,281 | INFO     | event service: False
[2025-06-03 12:05:54] 2025-06-03 16:05:34,282 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 6262: 2432187, 6263: 2441128, 6266: 2441312, 6270: 2441482}
[2025-06-03 12:05:54] 2025-06-03 16:05:34,282 | INFO     | --------------------------------------------------
[2025-06-03 12:05:54] 2025-06-03 16:05:34,282 | INFO     | 
[2025-06-03 12:05:54] 2025-06-03 16:05:34,282 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 12:05:54] 2025-06-03 16:05:34,299 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,301 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,302 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:05:54] 2025-06-03 16:05:34,302 | INFO     | job 6677577366 has completed (purged errors)
[2025-06-03 12:05:54] 2025-06-03 16:05:34,302 | INFO     | overall cleanup function is called
[2025-06-03 12:05:54] 2025-06-03 16:05:35,310 | INFO     | --- collectZombieJob: --- 10, [1359044]
[2025-06-03 12:05:54] 2025-06-03 16:05:35,311 | INFO     | zombie collector waiting for pid 1359044
[2025-06-03 12:05:54] 2025-06-03 16:05:35,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:05:54] 2025-06-03 16:05:35,311 | INFO     | collected zombie processes
[2025-06-03 12:05:54] 2025-06-03 16:05:35,311 | INFO     | will attempt to kill all subprocesses of pid=1359044
[2025-06-03 12:05:54] 2025-06-03 16:05:35,588 | INFO     | process IDs to be killed: [1359044] (in reverse order)
[2025-06-03 12:05:54] 2025-06-03 16:05:35,662 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:05:54] 2025-06-03 16:05:35,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:05:54] 2025-06-03 16:05:35,672 | INFO     | did not find any defunct processes belonging to 1359044
[2025-06-03 12:05:54] 2025-06-03 16:05:35,680 | INFO     | did not find any defunct processes belonging to 1359044
[2025-06-03 12:05:54] 2025-06-03 16:05:35,681 | INFO     | ready for new job
[2025-06-03 12:05:54] 2025-06-03 16:05:35,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:05:54] 2025-06-03 16:05:35,683 | INFO     | **************************************
[2025-06-03 12:05:54] 2025-06-03 16:05:35,683 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:05:54] 2025-06-03 16:05:35,683 | INFO     | **************************************
[2025-06-03 12:05:54] 2025-06-03 16:05:35,683 | INFO     | 
[2025-06-03 12:05:54] 2025-06-03 16:05:35,696 | INFO     | architecture information:
[2025-06-03 12:05:54] 2025-06-03 16:05:35,697 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:05:54] 2025-06-03 16:05:35,709 | INFO     | cat /etc/os-release:
[2025-06-03 12:05:54] NAME="CentOS Linux"
[2025-06-03 12:05:54] VERSION="7 (Core)"
[2025-06-03 12:05:54] ID="centos"
[2025-06-03 12:05:54] ID_LIKE="rhel fedora"
[2025-06-03 12:05:54] VERSION_ID="7"
[2025-06-03 12:05:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:05:54] ANSI_COLOR="0;31"
[2025-06-03 12:05:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:05:54] HOME_URL="https://www.centos.org/"
[2025-06-03 12:05:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:05:54] 
[2025-06-03 12:05:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:05:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:05:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:05:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:05:54] 
[2025-06-03 12:05:54] 2025-06-03 16:05:35,709 | INFO     | **************************************
[2025-06-03 12:05:54] 2025-06-03 16:05:36,212 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 12:05:54] 2025-06-03 16:05:36,224 | INFO     | sufficient remaining disk space (94568972288 B)
[2025-06-03 12:05:54] 2025-06-03 16:05:36,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:05:54] 2025-06-03 16:05:36,225 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:05:54] 2025-06-03 16:05:36,225 | INFO     | update_server=False
[2025-06-03 12:05:54] 2025-06-03 16:05:36,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:05:54] 2025-06-03 16:05:36,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:05:54] 2025-06-03 16:05:36,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:05:54] 2025-06-03 16:05:36,226 | INFO     | aborting loop
[2025-06-03 12:05:54] 2025-06-03 16:05:36,312 | INFO     | all job control threads have been joined
[2025-06-03 12:05:54] 2025-06-03 16:05:36,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:05:54] 2025-06-03 16:05:36,505 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:05:54] 2025-06-03 16:05:36,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:05:54] 2025-06-03 16:05:36,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:05:54] 2025-06-03 16:05:36,624 | INFO     | all payload control threads have been joined
[2025-06-03 12:05:54] 2025-06-03 16:05:37,231 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,232 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,232 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,242 | INFO     | all data control threads have been joined
[2025-06-03 12:05:54] 2025-06-03 16:05:37,317 | INFO     | [job] control thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,460 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,467 | INFO     | [job] validate thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,471 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:05:54] 2025-06-03 16:05:37,528 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:37,630 | INFO     | [payload] control thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:38,245 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:38,248 | INFO     | [data] control thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:38,261 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:38,567 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:39,507 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:40,328 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:46,598 [wrapper] supervise_pilot (15 min periods counter: 8)
[2025-06-03 12:05:54] 2025-06-03 16:05:47,018 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:05:54] 2025-06-03 16:05:48,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:05:54] 2025-06-03 16:05:48,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930885285696)>', '<ExcThread(monitor, started 139930101610240)>']
[2025-06-03 12:05:54] 2025-06-03 16:05:49,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:05:54] 2025-06-03 16:05:49,565 | INFO     | [monitor] control thread has ended
[2025-06-03 12:05:54] 2025-06-03 16:05:53,795 | INFO     | all workflow threads have been joined
[2025-06-03 12:05:54] 2025-06-03 16:05:53,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:05:54] 2025-06-03 16:05:53,796 | INFO     | traces error code: 0
[2025-06-03 12:05:54] 2025-06-03 16:05:53,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:05:54] 2025-06-03 16:05:53,940 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:05:54] 2025-06-03 16:05:53,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:05:54] 2025-06-03 16:05:53,944 [wrapper] pilotpid: 1351977
[2025-06-03 12:05:54] 2025-06-03 16:05:53,946 [wrapper] Pilot exit status: 0
[2025-06-03 12:05:54] 2025-06-03 16:05:53,956 [wrapper] pandaids: 6677577366
[2025-06-03 12:05:54] 2025-06-03 16:05:54,005 [wrapper] cleanup supervisor_pilot 1604459 1351978
[2025-06-03 12:05:54] 2025-06-03 16:05:54,008 [wrapper] Test setup, not cleaning
[2025-06-03 12:05:54] 2025-06-03 16:05:54,011 [wrapper] apfmon messages muted
[2025-06-03 12:05:54] 2025-06-03 16:05:54,013 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:05:54] 2025-06-03 16:05:54,015 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:05:54]  *** Error codes and diagnostics ***
[2025-06-03 12:05:54]     "exeErrorCode": 0,
[2025-06-03 12:05:54]     "exeErrorDiag": "",
[2025-06-03 12:05:54]     "pilotErrorCode": 0,
[2025-06-03 12:05:54]     "pilotErrorDiag": "",
[2025-06-03 12:05:54]  *** Listing of results directory ***
[2025-06-03 12:05:54] total 393084
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:30 pilot3.tar.gz
[2025-06-03 12:05:54] -rwx------. 1 boincer umatlas     37140 Jun  3 06:37 runpilot2-wrapper.sh
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 06:37 queuedata.json
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas       100 Jun  3 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:05:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 10:20 run_atlas
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas       105 Jun  3 10:20 job.xml
[2025-06-03 12:05:54] -rw-r--r--. 2 boincer umatlas 218226049 Jun  3 10:20 EVNT.45006593._001166.pool.root.1
[2025-06-03 12:05:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:20 start_atlas.sh
[2025-06-03 12:05:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 10:20 shared
[2025-06-03 12:05:54] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 10:20 input.tar.gz
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas         0 Jun  3 10:20 boinc_lockfile
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 10:20 pandaJob.out
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas    982724 Jun  3 10:20 agis_schedconf.cvmfs.json
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas   1603667 Jun  3 10:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:05:54] drwx------. 4 boincer umatlas      4096 Jun  3 10:20 pilot3
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas      6659 Jun  3 12:00 init_data.xml
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas        95 Jun  3 12:04 pilot_heartbeat.json
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas 178617445 Jun  3 12:04 HITS.45006595._029163.pool.root.1
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas       529 Jun  3 12:04 boinc_task_state.xml
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas      1033 Jun  3 12:05 memory_monitor_summary.json
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas    321958 Jun  3 12:05 log.45006595._029163.job.log.tgz.1
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas      7709 Jun  3 12:05 heartbeat.json
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 12:05 boinc_mmap_file
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas        27 Jun  3 12:05 wrapper_checkpoint.txt
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas      4425 Jun  3 12:05 pilotlog.txt
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas    603480 Jun  3 12:05 log.45006595._029163.job.log.1
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas       357 Jun  3 12:05 output.list
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas       620 Jun  3 12:05 runtime_log
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas    942080 Jun  3 12:05 result.tar.gz
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 12:05 runtime_log.err
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas       650 Jun  3 12:05 MlBMDmTCeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmGKYKDm0QtcSm.diag
[2025-06-03 12:05:54] -rw-r--r--. 1 boincer umatlas     20717 Jun  3 12:05 stderr.txt
[2025-06-03 12:05:54] HITS file was successfully produced:
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas 178617445 Jun  3 12:04 shared/HITS.pool.root.1
[2025-06-03 12:05:54]  *** Contents of shared directory: ***
[2025-06-03 12:05:54] total 388984
[2025-06-03 12:05:54] -rw-r--r--. 2 boincer umatlas 218226049 Jun  3 10:20 ATLAS.root_0
[2025-06-03 12:05:54] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:20 start_atlas.sh
[2025-06-03 12:05:54] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 10:20 input.tar.gz
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas 178617445 Jun  3 12:04 HITS.pool.root.1
[2025-06-03 12:05:54] -rw-------. 1 boincer umatlas    942080 Jun  3 12:05 result.tar.gz
12:05:55 (1348378): run_atlas exited; CPU time 40708.647752
12:05:55 (1348378): called boinc_finish(0)

</stderr_txt>
]]>

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