Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:56:58 (28827): wrapper (7.7.26015): starting
01:56:58 (28827): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:56:58] Arguments: --nthreads 8
[2025-06-04 01:56:58] Threads: 8
[2025-06-04 01:56:58] Checking for CVMFS
[2025-06-04 01:56:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:56:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:56:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:57:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:57:00] 2.11.2.0 25320 32445 97220 146761 2 69 21102208 25165825 4275 130560 0 16917234 99.800 18982121 2255 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:57:00] CVMFS is ok
[2025-06-04 01:57:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:57:00] Checking for apptainer binary...
[2025-06-04 01:57:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:57:00] Running /usr/bin/apptainer --version
[2025-06-04 01:57:01] apptainer version 1.3.2-1.el7
[2025-06-04 01:57:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:07:37] cg-vwn449.simple-grid.lan
[2025-06-04 02:07:37] apptainer works
[2025-06-04 02:07:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:07:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:07:37] Starting ATLAS job with PandaID=6677545136
[2025-06-04 02:07:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:06:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:06:53] 2025-06-04 03:58:18,252 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:06:53] 2025-06-04 03:58:18,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:06:53] 2025-06-04 03:58:18,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:06:53] 2025-06-04 03:58:18,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:06:53] 2025-06-04 03:58:18,257 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:06:53] 2025-06-04 03:58:18,257 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,259 | INFO     | sum of deviations: 68738444323.00003
[2025-06-04 06:06:53] 2025-06-04 03:58:18,259 | INFO     | mean x: 1749002875.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,259 | INFO     | mean y: 2457891.8186046514
[2025-06-04 06:06:53] 2025-06-04 03:58:18,260 | INFO     | -- intersect: -39010224672.80883
[2025-06-04 06:06:53] 2025-06-04 03:58:18,260 | INFO     | intersect: -39010224672.80883
[2025-06-04 06:06:53] 2025-06-04 03:58:18,260 | INFO     | chi2: 5.036841144895804
[2025-06-04 06:06:53] 2025-06-04 03:58:18,261 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 06:06:53] 2025-06-04 03:58:18,262 | INFO     | sum of deviations: 67571324033.49999
[2025-06-04 06:06:53] 2025-06-04 03:58:18,262 | INFO     | mean x: 1749002722.5
[2025-06-04 06:06:53] 2025-06-04 03:58:18,263 | INFO     | mean y: 2457045.376190476
[2025-06-04 06:06:53] 2025-06-04 03:58:18,263 | INFO     | -- intersect: -41152907622.72463
[2025-06-04 06:06:53] 2025-06-04 03:58:18,263 | INFO     | intersect: -41152907622.72463
[2025-06-04 06:06:53] 2025-06-04 03:58:18,263 | INFO     | chi2: 5.044609311276254
[2025-06-04 06:06:53] 2025-06-04 03:58:18,263 | INFO     | current chi2=5.044609311276254 (change=-0.15422694814035082 %)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,263 | INFO     | right removable region: 209
[2025-06-04 06:06:53] 2025-06-04 03:58:18,264 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 06:06:53] 2025-06-04 03:58:18,265 | INFO     | sum of deviations: -2129902046.9999998
[2025-06-04 06:06:53] 2025-06-04 03:58:18,274 | INFO     | mean x: 1749003027.5
[2025-06-04 06:06:53] 2025-06-04 03:58:18,274 | INFO     | mean y: 2509250.9523809524
[2025-06-04 06:06:53] 2025-06-04 03:58:18,274 | INFO     | -- intersect: 1299759408.3448465
[2025-06-04 06:06:53] 2025-06-04 03:58:18,274 | INFO     | intersect: 1299759408.3448465
[2025-06-04 06:06:53] 2025-06-04 03:58:18,275 | INFO     | chi2: 0.6736260942979427
[2025-06-04 06:06:53] 2025-06-04 03:58:18,275 | INFO     | current chi2=0.6736260942979427 (change=86.62602065620877 %)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,275 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,277 | INFO     | sum of deviations: -25562137230.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,277 | INFO     | mean x: 1749003180.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,277 | INFO     | mean y: 2526958.1219512196
[2025-06-04 06:06:53] 2025-06-04 03:58:18,277 | INFO     | -- intersect: 16738774404.398664
[2025-06-04 06:06:53] 2025-06-04 03:58:18,277 | INFO     | intersect: 16738774404.398664
[2025-06-04 06:06:53] 2025-06-04 03:58:18,278 | INFO     | chi2: 0.03487320531337221
[2025-06-04 06:06:53] 2025-06-04 03:58:18,278 | INFO     | current chi2=0.03487320531337221 (change=94.82306199113066 %)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,278 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,280 | INFO     | sum of deviations: -25505689995.499996
[2025-06-04 06:06:53] 2025-06-04 03:58:18,280 | INFO     | mean x: 1749003332.5
[2025-06-04 06:06:53] 2025-06-04 03:58:18,280 | INFO     | mean y: 2526906.735
[2025-06-04 06:06:53] 2025-06-04 03:58:18,280 | INFO     | -- intersect: 17985858833.425293
[2025-06-04 06:06:53] 2025-06-04 03:58:18,280 | INFO     | intersect: 17985858833.425293
[2025-06-04 06:06:53] 2025-06-04 03:58:18,281 | INFO     | chi2: 0.03197820363771574
[2025-06-04 06:06:53] 2025-06-04 03:58:18,281 | INFO     | current chi2=0.03197820363771574 (change=8.301507273684345 %)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,281 | INFO     | left removable region: 30
[2025-06-04 06:06:53] 2025-06-04 03:58:18,281 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,282 | INFO     | sum of deviations: -20361950426.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,283 | INFO     | mean x: 1749003607.0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,283 | INFO     | mean y: 2524171.061452514
[2025-06-04 06:06:53] 2025-06-04 03:58:18,283 | INFO     | -- intersect: 20028150979.689194
[2025-06-04 06:06:53] 2025-06-04 03:58:18,283 | INFO     | intersect: 20028150979.689194
[2025-06-04 06:06:53] 2025-06-04 03:58:18,283 | INFO     | chi2: 0.030270534320776567
[2025-06-04 06:06:53] 2025-06-04 03:58:18,283 | INFO     | -- intersect: 20028150979.689194
[2025-06-04 06:06:53] 2025-06-04 03:58:18,284 | INFO     | current memory leak: -11.45 B/s (using 179 data points, chi2=0.03)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,284 | INFO     | ..............................
[2025-06-04 06:06:53] 2025-06-04 03:58:18,284 | INFO     | . Timing measurements:
[2025-06-04 06:06:53] 2025-06-04 03:58:18,284 | INFO     | . get job = 0 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | . initial setup = 9 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | . payload setup = 162 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | . stage-in = 0 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | . payload execution = 13247 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | . stage-out = 1 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | . log creation = 0 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,285 | INFO     | ..............................
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | 
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | job summary report
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | --------------------------------------------------
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | PanDA job id: 6677545136
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | task id: 45006595
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | errors: (none)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | pilot state: finished 
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | transexitcode: 0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | exeerrorcode: 0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | exeerrordiag: 
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | exitcode: 0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | exitmsg: OK
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | cpuconsumptiontime: 47964 s
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | nevents: 400
[2025-06-04 06:06:53] 2025-06-04 03:58:18,424 | INFO     | neventsw: 0
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | pid: 15190
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | pgrp: 15190
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | corecount: 8
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | event service: False
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | sizes: {0: 2404356, 1: 2405041, 2: 2405240, 13: 2405240, 24: 2405296, 34: 2405324, 45: 2405480, 56: 2405508, 67: 2405536, 77: 2405564, 88: 2405620, 89: 2406134, 99
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | --------------------------------------------------
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | 
[2025-06-04 06:06:53] 2025-06-04 03:58:18,425 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 06:06:53] 2025-06-04 03:58:18,635 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,638 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,638 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:06:53] 2025-06-04 03:58:18,638 | INFO     | job 6677545136 has completed (purged errors)
[2025-06-04 06:06:53] 2025-06-04 03:58:18,638 | INFO     | overall cleanup function is called
[2025-06-04 06:06:53] 2025-06-04 03:58:19,648 | INFO     | --- collectZombieJob: --- 10, [15190]
[2025-06-04 06:06:53] 2025-06-04 03:58:19,648 | INFO     | zombie collector waiting for pid 15190
[2025-06-04 06:06:53] 2025-06-04 03:58:19,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:06:53] 2025-06-04 03:58:19,648 | INFO     | collected zombie processes
[2025-06-04 06:06:53] 2025-06-04 03:58:19,648 | INFO     | will attempt to kill all subprocesses of pid=15190
[2025-06-04 06:06:53] 2025-06-04 03:58:19,786 | INFO     | process IDs to be killed: [15190] (in reverse order)
[2025-06-04 06:06:53] 2025-06-04 03:58:20,627 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:06:53] 2025-06-04 03:58:20,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:06:53] 2025-06-04 03:58:20,631 | INFO     | did not find any defunct processes belonging to 15190
[2025-06-04 06:06:53] 2025-06-04 03:58:20,635 | INFO     | did not find any defunct processes belonging to 15190
[2025-06-04 06:06:53] 2025-06-04 03:58:20,635 | INFO     | ready for new job
[2025-06-04 06:06:53] 2025-06-04 03:58:20,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:06:53] 2025-06-04 03:58:20,637 | INFO     | **************************************
[2025-06-04 06:06:53] 2025-06-04 03:58:20,638 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:06:53] 2025-06-04 03:58:20,638 | INFO     | **************************************
[2025-06-04 06:06:53] 2025-06-04 03:58:20,638 | INFO     | 
[2025-06-04 06:06:53] 2025-06-04 03:58:20,638 | INFO     | pilot is running in a VM
[2025-06-04 06:06:53] 2025-06-04 03:58:20,639 | INFO     | architecture information:
[2025-06-04 06:06:53] 2025-06-04 03:58:20,642 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:06:53] 2025-06-04 03:58:20,876 | INFO     | cat /etc/os-release:
[2025-06-04 06:06:53] NAME="CentOS Linux"
[2025-06-04 06:06:53] VERSION="7 (Core)"
[2025-06-04 06:06:53] ID="centos"
[2025-06-04 06:06:53] ID_LIKE="rhel fedora"
[2025-06-04 06:06:53] VERSION_ID="7"
[2025-06-04 06:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:06:53] ANSI_COLOR="0;31"
[2025-06-04 06:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:06:53] HOME_URL="https://www.centos.org/"
[2025-06-04 06:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:06:53] 
[2025-06-04 06:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:06:53] 
[2025-06-04 06:06:53] 2025-06-04 03:58:20,877 | INFO     | **************************************
[2025-06-04 06:06:53] 2025-06-04 03:58:21,381 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 06:06:53] 2025-06-04 03:58:21,615 | INFO     | sufficient remaining disk space (497034461184 B)
[2025-06-04 06:06:53] 2025-06-04 03:58:21,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:06:53] 2025-06-04 03:58:21,616 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:06:53] 2025-06-04 03:58:21,616 | INFO     | update_server=False
[2025-06-04 06:06:53] 2025-06-04 03:58:21,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:06:53] 2025-06-04 03:58:21,626 | INFO     | PID=6584 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 06:06:53] 2025-06-04 03:58:21,626 | INFO     | .. there are 9 such processes running
[2025-06-04 06:06:53] 2025-06-04 03:58:21,626 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:06:53] 2025-06-04 03:58:21,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:06:53] 2025-06-04 03:58:21,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:06:53] 2025-06-04 03:58:21,743 | INFO     | all data control threads have been joined
[2025-06-04 06:06:53] 2025-06-04 03:58:21,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:06:53] 2025-06-04 03:58:22,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:06:53] 2025-06-04 03:58:22,507 | INFO     | aborting loop
[2025-06-04 06:06:53] 2025-06-04 03:58:22,555 | INFO     | all payload control threads have been joined
[2025-06-04 06:06:53] 2025-06-04 03:58:22,560 | INFO     | all job control threads have been joined
[2025-06-04 06:06:53] 2025-06-04 03:58:22,622 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:22,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:22,749 | INFO     | [data] control thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:22,823 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,127 | INFO     | [job] validate thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,302 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,436 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:06:53] 2025-06-04 03:58:23,506 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,513 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,561 | INFO     | [payload] control thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,566 | INFO     | [job] control thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,766 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:23,785 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:24,121 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:24,452 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:24,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:06:53] 2025-06-04 03:58:28,823 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:06:53] 2025-06-04 03:58:30,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038822598464)>', '<ExcThread(monitor, started 140038381745920)>']
[2025-06-04 06:06:53] 2025-06-04 03:58:30,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:06:53] 2025-06-04 03:58:30,682 | INFO     | [monitor] control thread has ended
[2025-06-04 06:06:53] 2025-06-04 03:58:35,700 | INFO     | all workflow threads have been joined
[2025-06-04 06:06:53] 2025-06-04 03:58:35,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:06:53] 2025-06-04 03:58:35,700 | INFO     | traces error code: 0
[2025-06-04 06:06:53] 2025-06-04 03:58:35,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:06:53] 2025-06-04 03:58:35,933 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:06:53] 2025-06-04 03:58:35,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:06:53] 2025-06-04 03:58:35,941 [wrapper] pilotpid: 6584
[2025-06-04 06:06:53] 2025-06-04 03:58:35,944 [wrapper] Pilot exit status: 0
[2025-06-04 06:06:53] 2025-06-04 03:58:35,975 [wrapper] pandaids: 6677545136
[2025-06-04 06:06:53] 2025-06-04 03:58:36,022 [wrapper] cleanup supervisor_pilot  8077 6585
[2025-06-04 06:06:53] 2025-06-04 03:58:36,060 [wrapper] Test setup, not cleaning
[2025-06-04 06:06:53] 2025-06-04 03:58:36,178 [wrapper] apfmon messages muted
[2025-06-04 06:06:53] 2025-06-04 03:58:36,258 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:06:53] 2025-06-04 03:58:36,352 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:06:53]  *** Error codes and diagnostics ***
[2025-06-04 06:06:53]     "exeErrorCode": 0,
[2025-06-04 06:06:53]     "exeErrorDiag": "",
[2025-06-04 06:06:53]     "pilotErrorCode": 0,
[2025-06-04 06:06:53]     "pilotErrorDiag": "",
[2025-06-04 06:06:53]  *** Listing of results directory ***
[2025-06-04 06:06:53] total 381084
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:07 pilot3.tar.gz
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc      5111 Jun  3 10:10 queuedata.json
[2025-06-04 06:06:53] -rwx------. 1 boinc boinc     37140 Jun  3 10:11 runpilot2-wrapper.sh
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:06:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:56 run_atlas
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:56 job.xml
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc      6392 Jun  4 01:56 init_data.xml
[2025-06-04 06:06:53] -rw-r--r--. 2 boinc boinc 213079419 Jun  4 01:56 EVNT.45006593._001012.pool.root.1
[2025-06-04 06:06:53] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:56 start_atlas.sh
[2025-06-04 06:06:53] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:56 shared
[2025-06-04 06:06:53] -rw-r--r--. 2 boinc boinc    508880 Jun  4 01:56 input.tar.gz
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:56 boinc_lockfile
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:07 pandaJob.out
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc    986077 Jun  4 02:10 agis_schedconf.cvmfs.json
[2025-06-04 06:06:53] drwx------. 4 boinc boinc      4096 Jun  4 02:10 pilot3
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc 170256339 Jun  4 05:56 HITS.45006595._025301.pool.root.1
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:57 boinc_task_state.xml
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc      1020 Jun  4 05:57 memory_monitor_summary.json
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc   1603667 Jun  4 05:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc    375893 Jun  4 05:57 log.45006595._025301.job.log.tgz.1
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc        95 Jun  4 05:58 pilot_heartbeat.json
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc      7697 Jun  4 05:58 heartbeat.json
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc      4807 Jun  4 05:58 pilotlog.txt
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc   1163076 Jun  4 05:58 log.45006595._025301.job.log.1
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc       357 Jun  4 05:58 output.list
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:58 runtime_log
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc   1556480 Jun  4 05:58 result.tar.gz
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc       657 Jun  4 05:58 tkGNDmmubg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmftiKDmcBMT5m.diag
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:58 runtime_log.err
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:06 boinc_mmap_file
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:06 wrapper_checkpoint.txt
[2025-06-04 06:06:53] -rw-r--r--. 1 boinc boinc     20592 Jun  4 06:06 stderr.txt
[2025-06-04 06:06:53] HITS file was successfully produced:
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc 170256339 Jun  4 05:56 shared/HITS.pool.root.1
[2025-06-04 06:06:53]  *** Contents of shared directory: ***
[2025-06-04 06:06:53] total 376392
[2025-06-04 06:06:53] -rw-r--r--. 2 boinc boinc 213079419 Jun  4 01:56 ATLAS.root_0
[2025-06-04 06:06:53] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:56 start_atlas.sh
[2025-06-04 06:06:53] -rw-r--r--. 2 boinc boinc    508880 Jun  4 01:56 input.tar.gz
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc 170256339 Jun  4 05:56 HITS.pool.root.1
[2025-06-04 06:06:53] -rw-------. 1 boinc boinc   1556480 Jun  4 05:58 result.tar.gz
06:06:55 (28827): run_atlas exited; CPU time 48148.283205
06:06:55 (28827): called boinc_finish(0)

</stderr_txt>
]]>

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