Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:37:38 (884447): wrapper (7.7.26015): starting
02:37:38 (884447): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 02:37:38] Arguments: --nthreads 4
[2025-06-05 02:37:38] Threads: 4
[2025-06-05 02:37:38] Checking for CVMFS
[2025-06-05 02:37:38] No cvmfs_config command found, will try listing directly
[2025-06-05 02:37:38] CVMFS is ok
[2025-06-05 02:37:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:37:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:37:38] Further information can be found at the LHC@home message board.
[2025-06-05 02:37:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:37:38] Checking for apptainer binary...
[2025-06-05 02:37:38] which: no apptainer in ((null))
[2025-06-05 02:37:38] apptainer is not installed, using version from CVMFS
[2025-06-05 02:37:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:37:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-05 02:37:38] apptainer works
[2025-06-05 02:37:38] Set ATHENA_PROC_NUMBER=4
[2025-06-05 02:37:38] Set ATHENA_CORE_NUMBER=4
[2025-06-05 02:37:38] Starting ATLAS job with PandaID=6677599759
[2025-06-05 02:37:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:44:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:44:51] 2025-06-05 02:44:25,702 | INFO     | monitor loop #531: job 0:6677599759 is in state 'finished'
[2025-06-05 04:44:51] 2025-06-05 02:44:25,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,451 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:44:51] 2025-06-05 02:44:27,452 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6677599759/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,454 | INFO     | extracted standard info from prmon json
[2025-06-05 04:44:51] 2025-06-05 02:44:27,454 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:44:51] 2025-06-05 02:44:27,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:44:51] 2025-06-05 02:44:27,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:44:51] 2025-06-05 02:44:27,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:44:51] 2025-06-05 02:44:27,458 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:44:51] 2025-06-05 02:44:27,458 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,459 | INFO     | sum of deviations: 6592611630.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,459 | INFO     | mean x: 1749087657.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,459 | INFO     | mean y: 2311351.4758064514
[2025-06-05 04:44:51] 2025-06-05 02:44:27,459 | INFO     | -- intersect: -19503042523.64004
[2025-06-05 04:44:51] 2025-06-05 02:44:27,459 | INFO     | intersect: -19503042523.64004
[2025-06-05 04:44:51] 2025-06-05 02:44:27,459 | INFO     | chi2: 1.470013942009787
[2025-06-05 04:44:51] 2025-06-05 02:44:27,460 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,460 | INFO     | sum of deviations: 6335157683.999999
[2025-06-05 04:44:51] 2025-06-05 02:44:27,460 | INFO     | mean x: 1749087505.0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | mean y: 2310779.529411765
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | -- intersect: -21204742509.27224
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | intersect: -21204742509.27224
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | chi2: 1.4720529282853527
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | current chi2=1.4720529282853527 (change=-0.13870523382778033 %)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | right removable region: 118
[2025-06-05 04:44:51] 2025-06-05 02:44:27,461 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,462 | INFO     | sum of deviations: -9583713416.0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,462 | INFO     | mean x: 1749087810.0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,462 | INFO     | mean y: 2346508.4453781513
[2025-06-05 04:44:51] 2025-06-05 02:44:27,462 | INFO     | -- intersect: 32084003618.84922
[2025-06-05 04:44:51] 2025-06-05 02:44:27,462 | INFO     | intersect: 32084003618.84922
[2025-06-05 04:44:51] 2025-06-05 02:44:27,463 | INFO     | chi2: 0.030985214063491442
[2025-06-05 04:44:51] 2025-06-05 02:44:27,463 | INFO     | current chi2=0.030985214063491442 (change=97.89218229990875 %)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,463 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,463 | INFO     | sum of deviations: -7607656144.499998
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | mean x: 1749087962.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | mean y: 2341685.6403508773
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | -- intersect: 28969304820.796955
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | intersect: 28969304820.796955
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | chi2: 0.025976350122945777
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | current chi2=0.025976350122945777 (change=16.165335925328964 %)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | left removable region: 20
[2025-06-05 04:44:51] 2025-06-05 02:44:27,464 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,465 | INFO     | sum of deviations: -3504472356.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,465 | INFO     | mean x: 1749088084.5
[2025-06-05 04:44:51] 2025-06-05 02:44:27,465 | INFO     | mean y: 2331086.6224489794
[2025-06-05 04:44:51] 2025-06-05 02:44:27,465 | INFO     | -- intersect: 21007341020.538834
[2025-06-05 04:44:51] 2025-06-05 02:44:27,465 | INFO     | intersect: 21007341020.538834
[2025-06-05 04:44:51] 2025-06-05 02:44:27,465 | INFO     | chi2: 0.014176349895590327
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | -- intersect: 21007341020.538834
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | current memory leak: -12.01 B/s (using 98 data points, chi2=0.01)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | ..............................
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | . Timing measurements:
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | . get job = 0 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | . initial setup = 1 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,466 | INFO     | . payload setup = 9 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,467 | INFO     | . stage-in = 0 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,467 | INFO     | . payload execution = 7554 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,467 | INFO     | . stage-out = 0 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,467 | INFO     | . log creation = 0 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,467 | INFO     | ..............................
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | 
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | job summary report
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | --------------------------------------------------
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | PanDA job id: 6677599759
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | task id: 45006595
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | errors: (none)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | pilot state: finished 
[2025-06-05 04:44:51] 2025-06-05 02:44:27,665 | INFO     | transexitcode: 0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | exeerrorcode: 0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | exeerrordiag: 
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | exitcode: 0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | exitmsg: OK
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | cpuconsumptiontime: 28551 s
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | nevents: 400
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | neventsw: 0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | pid: 895859
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | pgrp: 895859
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | corecount: 4
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | event service: False
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | sizes: {0: 2397354, 7: 2397560, 11: 2397588, 7568: 2425219, 7569: 2425218, 7570: 2434423, 7579: 2434537}
[2025-06-05 04:44:51] 2025-06-05 02:44:27,666 | INFO     | --------------------------------------------------
[2025-06-05 04:44:51] 2025-06-05 02:44:27,667 | INFO     | 
[2025-06-05 04:44:51] 2025-06-05 02:44:27,667 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-05 04:44:51] 2025-06-05 02:44:27,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:44:51] 2025-06-05 02:44:27,698 | INFO     | job 6677599759 has completed (purged errors)
[2025-06-05 04:44:51] 2025-06-05 02:44:27,698 | INFO     | overall cleanup function is called
[2025-06-05 04:44:51] 2025-06-05 02:44:28,708 | INFO     | --- collectZombieJob: --- 10, [895859]
[2025-06-05 04:44:51] 2025-06-05 02:44:28,708 | INFO     | zombie collector waiting for pid 895859
[2025-06-05 04:44:51] 2025-06-05 02:44:28,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:44:51] 2025-06-05 02:44:28,708 | INFO     | collected zombie processes
[2025-06-05 04:44:51] 2025-06-05 02:44:28,708 | INFO     | will attempt to kill all subprocesses of pid=895859
[2025-06-05 04:44:51] 2025-06-05 02:44:29,638 | INFO     | process IDs to be killed: [895859] (in reverse order)
[2025-06-05 04:44:51] 2025-06-05 02:44:29,882 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:44:51] 2025-06-05 02:44:29,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:44:51] 2025-06-05 02:44:29,934 | INFO     | did not find any defunct processes belonging to 895859
[2025-06-05 04:44:51] 2025-06-05 02:44:29,982 | INFO     | did not find any defunct processes belonging to 895859
[2025-06-05 04:44:51] 2025-06-05 02:44:29,982 | INFO     | ready for new job
[2025-06-05 04:44:51] 2025-06-05 02:44:29,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:44:51] 2025-06-05 02:44:29,984 | INFO     | **************************************
[2025-06-05 04:44:51] 2025-06-05 02:44:29,985 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:44:51] 2025-06-05 02:44:29,985 | INFO     | **************************************
[2025-06-05 04:44:51] 2025-06-05 02:44:29,985 | INFO     | 
[2025-06-05 04:44:51] 2025-06-05 02:44:29,995 | INFO     | architecture information:
[2025-06-05 04:44:51] 2025-06-05 02:44:29,995 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:44:51] 2025-06-05 02:44:30,018 | INFO     | cat /etc/os-release:
[2025-06-05 04:44:51] NAME="CentOS Linux"
[2025-06-05 04:44:51] VERSION="7 (Core)"
[2025-06-05 04:44:51] ID="centos"
[2025-06-05 04:44:51] ID_LIKE="rhel fedora"
[2025-06-05 04:44:51] VERSION_ID="7"
[2025-06-05 04:44:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:44:51] ANSI_COLOR="0;31"
[2025-06-05 04:44:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:44:51] HOME_URL="https://www.centos.org/"
[2025-06-05 04:44:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:44:51] 
[2025-06-05 04:44:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:44:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:44:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:44:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:44:51] 
[2025-06-05 04:44:51] 2025-06-05 02:44:30,021 | INFO     | **************************************
[2025-06-05 04:44:51] 2025-06-05 02:44:30,312 | INFO     | PID=888365 has CPU usage=18.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 04:44:51] 2025-06-05 02:44:30,312 | INFO     | .. there are 14 such processes running
[2025-06-05 04:44:51] 2025-06-05 02:44:30,524 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-05 04:44:51] 2025-06-05 02:44:30,551 | INFO     | sufficient remaining disk space (3296222773248 B)
[2025-06-05 04:44:51] 2025-06-05 02:44:30,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:44:51] 2025-06-05 02:44:30,552 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:44:51] 2025-06-05 02:44:30,552 | INFO     | update_server=False
[2025-06-05 04:44:51] 2025-06-05 02:44:30,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:44:51] 2025-06-05 02:44:30,552 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:44:51] 2025-06-05 02:44:30,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:44:51] 2025-06-05 02:44:30,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:44:51] 2025-06-05 02:44:30,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:44:51] 2025-06-05 02:44:30,617 | INFO     | all payload control threads have been joined
[2025-06-05 04:44:51] 2025-06-05 02:44:30,715 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 04:44:51] 2025-06-05 02:44:30,716 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 04:44:51] 2025-06-05 02:44:30,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:44:51] 2025-06-05 02:44:30,716 | INFO     | will abort loop
[2025-06-05 04:44:51] 2025-06-05 02:44:31,211 | INFO     | all data control threads have been joined
[2025-06-05 04:44:51] 2025-06-05 02:44:31,558 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:31,622 | INFO     | [payload] control thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:31,721 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:31,790 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:31,856 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:31,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:44:51] 2025-06-05 02:44:31,961 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:31,980 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:32,146 | INFO     | all job control threads have been joined
[2025-06-05 04:44:51] 2025-06-05 02:44:32,212 | INFO     | [data] control thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:32,537 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:32,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:44:51] 2025-06-05 02:44:32,796 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:33,048 | INFO     | [job] validate thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:33,151 | INFO     | [job] control thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:33,596 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:33,940 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:34,035 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:44:51] 2025-06-05 02:44:38,041 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:40,727 | INFO     | job.realtimelogging is not enabled
[2025-06-05 04:44:51] 2025-06-05 02:44:41,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:44:51] 2025-06-05 02:44:42,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23031975876416)>', '<ExcThread(monitor, started 23031736923904)>']
[2025-06-05 04:44:51] 2025-06-05 02:44:43,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:44:51] 2025-06-05 02:44:43,619 | INFO     | [monitor] control thread has ended
[2025-06-05 04:44:51] 2025-06-05 02:44:47,704 | INFO     | all workflow threads have been joined
[2025-06-05 04:44:51] 2025-06-05 02:44:47,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:44:51] 2025-06-05 02:44:47,705 | INFO     | traces error code: 0
[2025-06-05 04:44:51] 2025-06-05 02:44:47,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:44:51] 2025-06-05 02:44:47,873 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:44:51] 2025-06-05 02:44:47,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:44:51] 2025-06-05 02:44:47,880 [wrapper] pilotpid: 888365
[2025-06-05 04:44:51] 2025-06-05 02:44:47,884 [wrapper] Pilot exit status: 0
[2025-06-05 04:44:51] 2025-06-05 02:44:47,898 [wrapper] pandaids: 6677599759
[2025-06-05 04:44:51] 2025-06-05 02:44:48,054 [wrapper] cleanup supervisor_pilot 1338565 888366
[2025-06-05 04:44:51] 2025-06-05 02:44:48,059 [wrapper] Test setup, not cleaning
[2025-06-05 04:44:51] 2025-06-05 02:44:48,062 [wrapper] apfmon messages muted
[2025-06-05 04:44:51] 2025-06-05 02:44:48,065 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:44:51] 2025-06-05 02:44:48,068 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:44:51]  *** Error codes and diagnostics ***
[2025-06-05 04:44:51]     "exeErrorCode": 0,
[2025-06-05 04:44:51]     "exeErrorDiag": "",
[2025-06-05 04:44:51]     "pilotErrorCode": 0,
[2025-06-05 04:44:51]     "pilotErrorDiag": "",
[2025-06-05 04:44:51]  *** Listing of results directory ***
[2025-06-05 04:44:51] total 379640
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc      5111 Jun  3 13:34 queuedata.json
[2025-06-05 04:44:51] -rwx------ 1 boinc boinc     37140 Jun  3 13:35 runpilot2-wrapper.sh
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc       100 Jun  5 02:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:44:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 02:37 run_atlas
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc       105 Jun  5 02:37 job.xml
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc      6687 Jun  5 02:37 init_data.xml
[2025-06-05 04:44:51] -rw-r--r-- 2 boinc boinc 214756667 Jun  5 02:37 EVNT.45006593._001236.pool.root.1
[2025-06-05 04:44:51] -rw-r--r-- 2 boinc boinc     15093 Jun  5 02:37 start_atlas.sh
[2025-06-05 04:44:51] drwxrwx--x 2 boinc boinc      4096 Jun  5 02:37 shared
[2025-06-05 04:44:51] -rw-r--r-- 2 boinc boinc    508881 Jun  5 02:37 input.tar.gz
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc         0 Jun  5 02:37 boinc_lockfile
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc      2525 Jun  5 02:37 pandaJob.out
[2025-06-05 04:44:51] -rw------- 1 boinc boinc    987117 Jun  5 02:37 agis_schedconf.cvmfs.json
[2025-06-05 04:44:51] -rw------- 1 boinc boinc   1598969 Jun  5 02:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:44:51] drwx------ 4 boinc boinc      4096 Jun  5 02:37 pilot3
[2025-06-05 04:44:51] -rw------- 1 boinc boinc 168173462 Jun  5 04:43 HITS.45006595._030845.pool.root.1
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc       530 Jun  5 04:43 boinc_task_state.xml
[2025-06-05 04:44:51] -rw------- 1 boinc boinc      1026 Jun  5 04:44 memory_monitor_summary.json
[2025-06-05 04:44:51] -rw------- 1 boinc boinc        95 Jun  5 04:44 pilot_heartbeat.json
[2025-06-05 04:44:51] -rw------- 1 boinc boinc    273374 Jun  5 04:44 log.45006595._030845.job.log.tgz.1
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc        27 Jun  5 04:44 wrapper_checkpoint.txt
[2025-06-05 04:44:51] -rw------- 1 boinc boinc      7699 Jun  5 04:44 heartbeat.json
[2025-06-05 04:44:51] -rw------- 1 boinc boinc      5141 Jun  5 04:44 pilotlog.txt
[2025-06-05 04:44:51] -rw------- 1 boinc boinc    722337 Jun  5 04:44 log.45006595._030845.job.log.1
[2025-06-05 04:44:51] -rw------- 1 boinc boinc       357 Jun  5 04:44 output.list
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:44 runtime_log
[2025-06-05 04:44:51] -rw------- 1 boinc boinc   1013760 Jun  5 04:44 result.tar.gz
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc      9040 Jun  5 04:44 runtime_log.err
[2025-06-05 04:44:51] -rw------- 1 boinc boinc       662 Jun  5 04:44 8IpKDmU6eg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3ojKDmukRQnm.diag
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:44 boinc_mmap_file
[2025-06-05 04:44:51] -rw-r--r-- 1 boinc boinc     20886 Jun  5 04:44 stderr.txt
[2025-06-05 04:44:51] HITS file was successfully produced:
[2025-06-05 04:44:51] -rw------- 1 boinc boinc 168173462 Jun  5 04:43 shared/HITS.pool.root.1
[2025-06-05 04:44:51]  *** Contents of shared directory: ***
[2025-06-05 04:44:51] total 375472
[2025-06-05 04:44:51] -rw-r--r-- 2 boinc boinc 214756667 Jun  5 02:37 ATLAS.root_0
[2025-06-05 04:44:51] -rw-r--r-- 2 boinc boinc     15093 Jun  5 02:37 start_atlas.sh
[2025-06-05 04:44:51] -rw-r--r-- 2 boinc boinc    508881 Jun  5 02:37 input.tar.gz
[2025-06-05 04:44:51] -rw------- 1 boinc boinc 168173462 Jun  5 04:43 HITS.pool.root.1
[2025-06-05 04:44:51] -rw------- 1 boinc boinc   1013760 Jun  5 04:44 result.tar.gz
04:44:52 (884447): run_atlas exited; CPU time 28948.124633
04:44:52 (884447): called boinc_finish(0)

</stderr_txt>
]]>

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